BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002870
         (1939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   466   e-128
emb|CBI34603.3| unnamed protein product [Vitis vinifera]              462   e-127
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   441   e-121
ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   441   e-121
ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800...   437   e-120

>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  466 bits (1199), Expect = e-128
 Identities = 259/413 (62%), Positives = 286/413 (69%), Gaps = 11/413 (2%)
 Frame = +3

Query: 504  MAVVENGAPEL-----SSNRNLETSADSNKDLDHQSXXXXXXXXXXXXXXXXXXXXXILR 668
            MAVVENG  +L     SSNRN + +A        Q                      ILR
Sbjct: 1    MAVVENGGVDLGISVGSSNRNFDAAAPEQNVSGDQEHLVRARMVDPSLHQNNNGNGPILR 60

Query: 669  PHSDQNFQIXXXXXXXXXXXXPHVNSPNGFQMTMNPNSGFHHRSNSHDLQ------QQRS 830
            PH    +               HV+S      ++  N     +    ++Q      Q RS
Sbjct: 61   PHDQGLYMKVQQFQERGAAPPAHVSSHKAQVASVQHNLDRSQKIGVQNMQVGPVAAQHRS 120

Query: 831  GGEMVVNNNGFKRDMRELEELLSKLNPMAEEFVPPSLTNNNNNHISAGAFYANNFLMFNH 1010
             G  +  N     DMREL+EL SKLNPMAEEFVPPSL NN  N    G FY+N       
Sbjct: 121  NGGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLANNGLN----GGFYSNGS---ET 173

Query: 1011 HNIHETGAVLDIPNGHGPPRRKKNNYNQGKRRINSRTSIAQREDVIRRTVYVSDIDHQVT 1190
            HN    G V    NG    RRKKNN+ QGKRR+NSRTS+AQRE++IRRTVYVSDID QVT
Sbjct: 174  HNNTRNGQV----NG----RRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVT 225

Query: 1191 EEQLAALFVNCGQVVDCRICGDPNSVLRFAFIEFTDEEGARASLSLAGTMLGYYPVRVLP 1370
            EE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARA+LSLAGTMLGYYPVRVLP
Sbjct: 226  EEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLP 285

Query: 1371 SKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLFFESICGAVYRLRLLGD 1550
            SKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVSQADVKLFFES+CG VYRLRLLGD
Sbjct: 286  SKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGD 345

Query: 1551 YHHSTRIAFVEFIMAESAIAALNCSGVILGSLPIRVSPSKTPVRPRAPRPHMH 1709
            YHHSTRIAFVEFIMAESAIAALNCSGV+LGSLPIRVSPSKTPVRPRAPR  +H
Sbjct: 346  YHHSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 398


>emb|CBI34603.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  462 bits (1190), Expect = e-127
 Identities = 257/413 (62%), Positives = 285/413 (69%), Gaps = 11/413 (2%)
 Frame = +3

Query: 504  MAVVENGAPEL-----SSNRNLETSADSNKDLDHQSXXXXXXXXXXXXXXXXXXXXXILR 668
            MAVVENG  +L     SSNRN + +A        Q                      ILR
Sbjct: 1    MAVVENGGVDLGISVGSSNRNFDAAAPEQNVSGDQEHLVRARMVDPSLHQNNNGNGPILR 60

Query: 669  PHSDQNFQIXXXXXXXXXXXXPHVNSPNGFQMTMNPNSGFHHRSNSHDLQ------QQRS 830
            PH    +               HV+S      ++  N     +    ++Q      Q RS
Sbjct: 61   PHDQGLYMKVQQFQERGAAPPAHVSSHKAQVASVQHNLDRSQKIGVQNMQVGPVAAQHRS 120

Query: 831  GGEMVVNNNGFKRDMRELEELLSKLNPMAEEFVPPSLTNNNNNHISAGAFYANNFLMFNH 1010
             G  +  N     DMREL+EL SKLNPMAEEFVPPSL NN  N    G FY+N       
Sbjct: 121  NGGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLANNGLN----GGFYSNGS---ET 173

Query: 1011 HNIHETGAVLDIPNGHGPPRRKKNNYNQGKRRINSRTSIAQREDVIRRTVYVSDIDHQVT 1190
            HN    G V    NG     R+KNN+ QGKRR+NSRTS+AQRE++IRRTVYVSDID QVT
Sbjct: 174  HNNTRNGQV----NG-----RRKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVT 224

Query: 1191 EEQLAALFVNCGQVVDCRICGDPNSVLRFAFIEFTDEEGARASLSLAGTMLGYYPVRVLP 1370
            EE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARA+LSLAGTMLGYYPVRVLP
Sbjct: 225  EEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLP 284

Query: 1371 SKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLFFESICGAVYRLRLLGD 1550
            SKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVSQADVKLFFES+CG VYRLRLLGD
Sbjct: 285  SKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGD 344

Query: 1551 YHHSTRIAFVEFIMAESAIAALNCSGVILGSLPIRVSPSKTPVRPRAPRPHMH 1709
            YHHSTRIAFVEFIMAESAIAALNCSGV+LGSLPIRVSPSKTPVRPRAPR  +H
Sbjct: 345  YHHSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 397


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
            gi|223541913|gb|EEF43459.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 379

 Score =  441 bits (1134), Expect = e-121
 Identities = 229/307 (74%), Positives = 257/307 (83%), Gaps = 6/307 (1%)
 Frame = +3

Query: 807  HDLQQQRSGGEMVVNNNGFKRDMRELEELLSKLNPMAEEFVPPSLTNN--NNNHISAGAF 980
            H  Q+   GG++       +RD+REL+EL SKLNPMAEEFVPPSL NN  +NN+I     
Sbjct: 82   HHHQRSSGGGDL-------QRDIRELQELFSKLNPMAEEFVPPSLANNKISNNYIHG--L 132

Query: 981  YANNFLMFNHHNIHETGAVLDIP--NG--HGPPRRKKNNYNQGKRRINSRTSIAQREDVI 1148
               N   + ++N ++   +L     NG  +G   R+K NYNQGKRR+NSRTS+AQRE++I
Sbjct: 133  NGLNVGFYTNNNNYDPAFMLTNASRNGQLNGSAARRKKNYNQGKRRLNSRTSMAQREEII 192

Query: 1149 RRTVYVSDIDHQVTEEQLAALFVNCGQVVDCRICGDPNSVLRFAFIEFTDEEGARASLSL 1328
            RRTVYVSDID QVTEEQLAALFV CGQVVDCRICGDPNSVLRFAFIEFT EEGARA+L+L
Sbjct: 193  RRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEGARAALNL 252

Query: 1329 AGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLFFE 1508
            AGT+LGYYPVRVLPSKTAIAPVNPTFLPRS+DEREMC RTIYCTNIDKKV+QADVKLFFE
Sbjct: 253  AGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCIRTIYCTNIDKKVTQADVKLFFE 312

Query: 1509 SICGAVYRLRLLGDYHHSTRIAFVEFIMAESAIAALNCSGVILGSLPIRVSPSKTPVRPR 1688
            S+CG VYRLRLLGDYHHSTRIAFVEF+MAESAIAALNCSGV+LGSLPIRVSPSKTPVRPR
Sbjct: 313  SVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR 372

Query: 1689 APRPHMH 1709
            APR  MH
Sbjct: 373  APRIPMH 379


>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
            gi|302143972|emb|CBI23077.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  441 bits (1134), Expect = e-121
 Identities = 226/280 (80%), Positives = 245/280 (87%)
 Frame = +3

Query: 870  DMRELEELLSKLNPMAEEFVPPSLTNNNNNHISAGAFYANNFLMFNHHNIHETGAVLDIP 1049
            D+R+LE+LLSKLNPMAEEFVPPSL N +     A   Y NNF++          A     
Sbjct: 93   DIRDLEDLLSKLNPMAEEFVPPSLANGHGWSAGAAFGYTNNFVL---------QANFGNA 143

Query: 1050 NGHGPPRRKKNNYNQGKRRINSRTSIAQREDVIRRTVYVSDIDHQVTEEQLAALFVNCGQ 1229
            NG+   RRK+NNYNQ KRRINSRTS+AQRE+VI+RTVYVSDID QVTEE LAALF+NCGQ
Sbjct: 144  NGNAG-RRKRNNYNQ-KRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQ 201

Query: 1230 VVDCRICGDPNSVLRFAFIEFTDEEGARASLSLAGTMLGYYPVRVLPSKTAIAPVNPTFL 1409
            VVDCRICGDPNSVLRFAF+EFTDEEGARA+LSLAGTMLGYYPVRVLPSKTAIAPVNPTFL
Sbjct: 202  VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFL 261

Query: 1410 PRSEDEREMCARTIYCTNIDKKVSQADVKLFFESICGAVYRLRLLGDYHHSTRIAFVEFI 1589
            PRSEDEREMCARTIYCTNIDKKV+QA+VKLFFESICG V+RLRLLGDYHHSTRIAFVEF+
Sbjct: 262  PRSEDEREMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFV 321

Query: 1590 MAESAIAALNCSGVILGSLPIRVSPSKTPVRPRAPRPHMH 1709
            MAESAIAALNCSG ILGSLPIRVSPSKTPVRPRAPRP +H
Sbjct: 322  MAESAIAALNCSGAILGSLPIRVSPSKTPVRPRAPRPALH 361


>ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
          Length = 369

 Score =  437 bits (1123), Expect = e-120
 Identities = 226/317 (71%), Positives = 257/317 (81%), Gaps = 5/317 (1%)
 Frame = +3

Query: 774  PNSGFHHR-SNSHDLQQQRSGGEMVVNNNG--FKRDMRELEELLSKLNPMAEEFVPPSLT 944
            PN  F ++ +N  +       G M   N G  FKRDMR+LEELLSKLNPMAEEFVPPSL 
Sbjct: 62   PNGNFSYKHANGVNNDGYGMNGVMSEENGGESFKRDMRDLEELLSKLNPMAEEFVPPSLA 121

Query: 945  NNNNNHI--SAGAFYANNFLMFNHHNIHETGAVLDIPNGHGPPRRKKNNYNQGKRRINSR 1118
            N +      +AG  Y NNF++ N++            NG    RR+KN YN GKRR+N +
Sbjct: 122  NTHGLLAGPNAGFGYTNNFILPNNYGN---------TNGQTNNRRRKNGYNPGKRRMNHK 172

Query: 1119 TSIAQREDVIRRTVYVSDIDHQVTEEQLAALFVNCGQVVDCRICGDPNSVLRFAFIEFTD 1298
              + +RE++IRRTVYVSDID  VTEEQLAALF+NCGQVVDCR+CGDPNS+LRFAFIEFTD
Sbjct: 173  MDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFIEFTD 232

Query: 1299 EEGARASLSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKV 1478
            +EGARA+LSL+GTMLGYYP+RVLPSKTAIAPVNPTFLPRSEDEREMC+RTIYCTNIDKK+
Sbjct: 233  DEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKL 292

Query: 1479 SQADVKLFFESICGAVYRLRLLGDYHHSTRIAFVEFIMAESAIAALNCSGVILGSLPIRV 1658
            +QADVK FFESICG V+RLRLLGDYHHSTRIAFVEF +AESAIAAL+CSGVILGSLPIRV
Sbjct: 293  TQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAALSCSGVILGSLPIRV 352

Query: 1659 SPSKTPVRPRAPRPHMH 1709
            SPSKTPVRPRAPRP MH
Sbjct: 353  SPSKTPVRPRAPRPPMH 369