BLASTX nr result
ID: Coptis21_contig00002868
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002868 (1289 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001234587.1| Ran binding protein-1 [Solanum lycopersicum]... 260 6e-67 ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|1... 250 5e-64 emb|CBI15927.3| unnamed protein product [Vitis vinifera] 250 6e-64 ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l... 250 6e-64 ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2... 250 6e-64 >ref|NP_001234587.1| Ran binding protein-1 [Solanum lycopersicum] gi|14091665|gb|AAK53813.1|AF370443_1 Ran binding protein-1 [Solanum lycopersicum] Length = 224 Score = 260 bits (664), Expect = 6e-67 Identities = 122/150 (81%), Positives = 142/150 (94%) Frame = +2 Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358 GAQ+API++L+EVAV+TGEE+EHVLLDLK+KLYRFDKEG+QWKERGVGTVKLLKHKE+GK Sbjct: 33 GAQVAPIVRLQEVAVSTGEENEHVLLDLKSKLYRFDKEGSQWKERGVGTVKLLKHKETGK 92 Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538 VRLVMRQSKTLKICANHLV+P+ SIQEHAGNEKSCVWHA DF+DGELK+E FC+RFASVE Sbjct: 93 VRLVMRQSKTLKICANHLVLPTMSIQEHAGNEKSCVWHAADFADGELKDETFCIRFASVE 152 Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTA 628 NCKAFKE V+E+AESQ +K G+S+EA + A Sbjct: 153 NCKAFKEKVEEIAESQQTKSGQSEEAGAAA 182 >ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|118481604|gb|ABK92744.1| unknown [Populus trichocarpa] gi|222845745|gb|EEE83292.1| predicted protein [Populus trichocarpa] Length = 218 Score = 250 bits (639), Expect = 5e-64 Identities = 120/151 (79%), Positives = 136/151 (90%) Frame = +2 Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358 GAQ+API+KLEEVAV+TGEE E +LDLK+KLYRFDK+GNQWKERG GTVK LKHKESGK Sbjct: 25 GAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKESGK 84 Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538 VRLVMRQSKTLKICANHLV+P+ S+QEHAGNEKSCVWHATDF+DGELK+E+FC+RFASVE Sbjct: 85 VRLVMRQSKTLKICANHLVLPAMSVQEHAGNEKSCVWHATDFADGELKDELFCIRFASVE 144 Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTAD 631 NCK F EM QEVAESQ S E+K+A + AD Sbjct: 145 NCKTFMEMFQEVAESQKSNE-ENKDATAAAD 174 >emb|CBI15927.3| unnamed protein product [Vitis vinifera] Length = 180 Score = 250 bits (638), Expect = 6e-64 Identities = 120/150 (80%), Positives = 138/150 (92%) Frame = +2 Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358 GAQ+API+KLEEVAVTTGEE E +LDLKAKLYRFDK+GNQWKERG G+VKLLKHKESGK Sbjct: 24 GAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESGK 83 Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538 VRLVMRQSKTLKICANHLV+P+ S+QEHAGN+KSCVWHATDF+DGELK+E+FC+RFASVE Sbjct: 84 VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 143 Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTA 628 NCK+F E VQEVAESQ K E+K+A++ A Sbjct: 144 NCKSFMEKVQEVAESQ-QKKEENKDASAAA 172 >ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera] Length = 223 Score = 250 bits (638), Expect = 6e-64 Identities = 120/150 (80%), Positives = 138/150 (92%) Frame = +2 Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358 GAQ+API+KLEEVAVTTGEE E +LDLKAKLYRFDK+GNQWKERG G+VKLLKHKESGK Sbjct: 24 GAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESGK 83 Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538 VRLVMRQSKTLKICANHLV+P+ S+QEHAGN+KSCVWHATDF+DGELK+E+FC+RFASVE Sbjct: 84 VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 143 Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTA 628 NCK+F E VQEVAESQ K E+K+A++ A Sbjct: 144 NCKSFMEKVQEVAESQ-QKKEENKDASAAA 172 >ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1| predicted protein [Populus trichocarpa] Length = 218 Score = 250 bits (638), Expect = 6e-64 Identities = 120/151 (79%), Positives = 137/151 (90%) Frame = +2 Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358 GAQ+API+KLEEVAV+TGEE E +LDLK+KLYRFDK+GNQWKERG GTVKLLKHKESGK Sbjct: 25 GAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKESGK 84 Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538 VRLVMRQSKTLKICANHLV+P+ S+QEHAGN+KSCVWHATDF+DGELK+E+FC+RFASVE Sbjct: 85 VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 144 Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTAD 631 NCK F EM QEVAESQ SK E+++A AD Sbjct: 145 NCKTFMEMFQEVAESQESKE-ENEDATVAAD 174