BLASTX nr result

ID: Coptis21_contig00002868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002868
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234587.1| Ran binding protein-1 [Solanum lycopersicum]...   260   6e-67
ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|1...   250   5e-64
emb|CBI15927.3| unnamed protein product [Vitis vinifera]              250   6e-64
ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l...   250   6e-64
ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|2...   250   6e-64

>ref|NP_001234587.1| Ran binding protein-1 [Solanum lycopersicum]
           gi|14091665|gb|AAK53813.1|AF370443_1 Ran binding
           protein-1 [Solanum lycopersicum]
          Length = 224

 Score =  260 bits (664), Expect = 6e-67
 Identities = 122/150 (81%), Positives = 142/150 (94%)
 Frame = +2

Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358
           GAQ+API++L+EVAV+TGEE+EHVLLDLK+KLYRFDKEG+QWKERGVGTVKLLKHKE+GK
Sbjct: 33  GAQVAPIVRLQEVAVSTGEENEHVLLDLKSKLYRFDKEGSQWKERGVGTVKLLKHKETGK 92

Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538
           VRLVMRQSKTLKICANHLV+P+ SIQEHAGNEKSCVWHA DF+DGELK+E FC+RFASVE
Sbjct: 93  VRLVMRQSKTLKICANHLVLPTMSIQEHAGNEKSCVWHAADFADGELKDETFCIRFASVE 152

Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTA 628
           NCKAFKE V+E+AESQ +K G+S+EA + A
Sbjct: 153 NCKAFKEKVEEIAESQQTKSGQSEEAGAAA 182


>ref|XP_002298487.1| predicted protein [Populus trichocarpa] gi|118481604|gb|ABK92744.1|
           unknown [Populus trichocarpa]
           gi|222845745|gb|EEE83292.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  250 bits (639), Expect = 5e-64
 Identities = 120/151 (79%), Positives = 136/151 (90%)
 Frame = +2

Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358
           GAQ+API+KLEEVAV+TGEE E  +LDLK+KLYRFDK+GNQWKERG GTVK LKHKESGK
Sbjct: 25  GAQVAPIVKLEEVAVSTGEEDEDTILDLKSKLYRFDKDGNQWKERGAGTVKFLKHKESGK 84

Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538
           VRLVMRQSKTLKICANHLV+P+ S+QEHAGNEKSCVWHATDF+DGELK+E+FC+RFASVE
Sbjct: 85  VRLVMRQSKTLKICANHLVLPAMSVQEHAGNEKSCVWHATDFADGELKDELFCIRFASVE 144

Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTAD 631
           NCK F EM QEVAESQ S   E+K+A + AD
Sbjct: 145 NCKTFMEMFQEVAESQKSNE-ENKDATAAAD 174


>emb|CBI15927.3| unnamed protein product [Vitis vinifera]
          Length = 180

 Score =  250 bits (638), Expect = 6e-64
 Identities = 120/150 (80%), Positives = 138/150 (92%)
 Frame = +2

Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358
           GAQ+API+KLEEVAVTTGEE E  +LDLKAKLYRFDK+GNQWKERG G+VKLLKHKESGK
Sbjct: 24  GAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESGK 83

Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538
           VRLVMRQSKTLKICANHLV+P+ S+QEHAGN+KSCVWHATDF+DGELK+E+FC+RFASVE
Sbjct: 84  VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 143

Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTA 628
           NCK+F E VQEVAESQ  K  E+K+A++ A
Sbjct: 144 NCKSFMEKVQEVAESQ-QKKEENKDASAAA 172


>ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera]
          Length = 223

 Score =  250 bits (638), Expect = 6e-64
 Identities = 120/150 (80%), Positives = 138/150 (92%)
 Frame = +2

Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358
           GAQ+API+KLEEVAVTTGEE E  +LDLKAKLYRFDK+GNQWKERG G+VKLLKHKESGK
Sbjct: 24  GAQVAPIVKLEEVAVTTGEEDEDAVLDLKAKLYRFDKDGNQWKERGAGSVKLLKHKESGK 83

Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538
           VRLVMRQSKTLKICANHLV+P+ S+QEHAGN+KSCVWHATDF+DGELK+E+FC+RFASVE
Sbjct: 84  VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 143

Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTA 628
           NCK+F E VQEVAESQ  K  E+K+A++ A
Sbjct: 144 NCKSFMEKVQEVAESQ-QKKEENKDASAAA 172


>ref|XP_002313984.1| predicted protein [Populus trichocarpa] gi|222850392|gb|EEE87939.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  250 bits (638), Expect = 6e-64
 Identities = 120/151 (79%), Positives = 137/151 (90%)
 Frame = +2

Query: 179 GAQIAPIIKLEEVAVTTGEEHEHVLLDLKAKLYRFDKEGNQWKERGVGTVKLLKHKESGK 358
           GAQ+API+KLEEVAV+TGEE E  +LDLK+KLYRFDK+GNQWKERG GTVKLLKHKESGK
Sbjct: 25  GAQVAPIVKLEEVAVSTGEEDEDAILDLKSKLYRFDKDGNQWKERGAGTVKLLKHKESGK 84

Query: 359 VRLVMRQSKTLKICANHLVIPSTSIQEHAGNEKSCVWHATDFSDGELKEEMFCMRFASVE 538
           VRLVMRQSKTLKICANHLV+P+ S+QEHAGN+KSCVWHATDF+DGELK+E+FC+RFASVE
Sbjct: 85  VRLVMRQSKTLKICANHLVLPTMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVE 144

Query: 539 NCKAFKEMVQEVAESQGSKPGESKEAASTAD 631
           NCK F EM QEVAESQ SK  E+++A   AD
Sbjct: 145 NCKTFMEMFQEVAESQESKE-ENEDATVAAD 174


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