BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002862
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,...   447   e-123
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,...   446   e-123
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...   444   e-122
gb|AFK35529.1| unknown [Lotus japonicus]                              442   e-122
ref|XP_003600046.1| Tryptophan synthase beta chain [Medicago tru...   441   e-121

>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Cucumis sativus]
          Length = 472

 Score =  447 bits (1150), Expect = e-123
 Identities = 215/229 (93%), Positives = 227/229 (99%)
 Frame = -1

Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754
           GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIGKETRKQA+EKWG
Sbjct: 242 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 301

Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574
           GKPDVLVACVGGGSNAMGLFHEFV+D DVRL+GVEAAG G+DSG+HAATLTKGEVGVLHG
Sbjct: 302 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHG 361

Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD+GRAEY+S+TDDEALEAFKRLS+
Sbjct: 362 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSR 421

Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 247
           LEGIIPALETSHALAYLEKLCPTLP+GTKVVLNCSGRGDKDVQTAIKYL
Sbjct: 422 LEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYL 470


>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Cucumis sativus]
          Length = 472

 Score =  446 bits (1147), Expect = e-123
 Identities = 214/229 (93%), Positives = 227/229 (99%)
 Frame = -1

Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754
           GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIGKETRKQA+EKWG
Sbjct: 242 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 301

Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574
           GKPDVLVACVGGGSNAMGLFHEFV+D DVRL+GVEAAG G+DSG+HAATLTKGEVGVLHG
Sbjct: 302 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHG 361

Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD+GRAEY+S+TDDEALEAFKRL++
Sbjct: 362 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLAR 421

Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 247
           LEGIIPALETSHALAYLEKLCPTLP+GTKVVLNCSGRGDKDVQTAIKYL
Sbjct: 422 LEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYL 470


>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic;
           Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan
           synthase beta subunit [Camptotheca acuminata]
           gi|2801771|gb|AAB97526.1| tryptophan synthase beta
           [Camptotheca acuminata]
          Length = 466

 Score =  444 bits (1141), Expect = e-122
 Identities = 215/229 (93%), Positives = 224/229 (97%)
 Frame = -1

Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754
           GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQA+EKWG
Sbjct: 236 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWG 295

Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574
           GKPDVLVACVGGGSNAMGLFHEFVDD DVR+IGVEAAG G+DSG+HAATLTKGEVGVLHG
Sbjct: 296 GKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHG 355

Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKDIGRAEYY  TD+EALEAFKRLS+
Sbjct: 356 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSR 415

Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 247
           LEGIIPALETSHALA+LEKLCPTLPNGTKVVLNCSGRGDKDV TAIK+L
Sbjct: 416 LEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHL 464


>gb|AFK35529.1| unknown [Lotus japonicus]
          Length = 417

 Score =  442 bits (1136), Expect = e-122
 Identities = 211/228 (92%), Positives = 224/228 (98%)
 Frame = -1

Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754
           GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREF AVIGKETRKQA+EKWG
Sbjct: 187 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFQAVIGKETRKQALEKWG 246

Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574
           GKPD+LVACVGGGSNAMGLFHEF+DD DVRLIGVEAAG G++SG+HAATLTKGE+GVLHG
Sbjct: 247 GKPDILVACVGGGSNAMGLFHEFIDDKDVRLIGVEAAGLGLESGKHAATLTKGEIGVLHG 306

Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD+GRAEYYS+TD+EALEAFKRLSQ
Sbjct: 307 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYYSVTDEEALEAFKRLSQ 366

Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKY 250
           LEGIIPALETSHALAYLEKLCPTLPNGTKVV+NCSGRGDKDVQTA KY
Sbjct: 367 LEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTASKY 414


>ref|XP_003600046.1| Tryptophan synthase beta chain [Medicago truncatula]
           gi|355489094|gb|AES70297.1| Tryptophan synthase beta
           chain [Medicago truncatula]
          Length = 412

 Score =  441 bits (1134), Expect = e-121
 Identities = 210/229 (91%), Positives = 225/229 (98%)
 Frame = -1

Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754
           GTATLKDATSEAIRDWVTNVE+THYILGSV GPHPYPMMVREFHAVIGKETRKQA+EKWG
Sbjct: 182 GTATLKDATSEAIRDWVTNVETTHYILGSVCGPHPYPMMVREFHAVIGKETRKQALEKWG 241

Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574
           GKPD+LVACVGGGSNA+GLFHEF+DD DVRLIGVEA+G G++SG+HAATLTKGEVGVLHG
Sbjct: 242 GKPDILVACVGGGSNAIGLFHEFIDDKDVRLIGVEASGLGLESGKHAATLTKGEVGVLHG 301

Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD GRAEYYS+TD+EALEAFKR+SQ
Sbjct: 302 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDAGRAEYYSVTDEEALEAFKRVSQ 361

Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 247
           LEGIIPALETSHALAYLEKLCPTLPNGTKVV+NCSGRGDKDVQTA+KYL
Sbjct: 362 LEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTAMKYL 410