BLASTX nr result
ID: Coptis21_contig00002862
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002862 (933 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,... 447 e-123 ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,... 446 e-123 sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch... 444 e-122 gb|AFK35529.1| unknown [Lotus japonicus] 442 e-122 ref|XP_003600046.1| Tryptophan synthase beta chain [Medicago tru... 441 e-121 >ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Cucumis sativus] Length = 472 Score = 447 bits (1150), Expect = e-123 Identities = 215/229 (93%), Positives = 227/229 (99%) Frame = -1 Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754 GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIGKETRKQA+EKWG Sbjct: 242 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 301 Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574 GKPDVLVACVGGGSNAMGLFHEFV+D DVRL+GVEAAG G+DSG+HAATLTKGEVGVLHG Sbjct: 302 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHG 361 Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD+GRAEY+S+TDDEALEAFKRLS+ Sbjct: 362 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSR 421 Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 247 LEGIIPALETSHALAYLEKLCPTLP+GTKVVLNCSGRGDKDVQTAIKYL Sbjct: 422 LEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYL 470 >ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Cucumis sativus] Length = 472 Score = 446 bits (1147), Expect = e-123 Identities = 214/229 (93%), Positives = 227/229 (99%) Frame = -1 Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754 GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIGKETRKQA+EKWG Sbjct: 242 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 301 Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574 GKPDVLVACVGGGSNAMGLFHEFV+D DVRL+GVEAAG G+DSG+HAATLTKGEVGVLHG Sbjct: 302 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHG 361 Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKD+GRAEY+S+TDDEALEAFKRL++ Sbjct: 362 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLAR 421 Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 247 LEGIIPALETSHALAYLEKLCPTLP+GTKVVLNCSGRGDKDVQTAIKYL Sbjct: 422 LEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYL 470 >sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags: Precursor gi|2792520|gb|AAB97087.1| tryptophan synthase beta subunit [Camptotheca acuminata] gi|2801771|gb|AAB97526.1| tryptophan synthase beta [Camptotheca acuminata] Length = 466 Score = 444 bits (1141), Expect = e-122 Identities = 215/229 (93%), Positives = 224/229 (97%) Frame = -1 Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQA+EKWG Sbjct: 236 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWG 295 Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574 GKPDVLVACVGGGSNAMGLFHEFVDD DVR+IGVEAAG G+DSG+HAATLTKGEVGVLHG Sbjct: 296 GKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHG 355 Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKDIGRAEYY TD+EALEAFKRLS+ Sbjct: 356 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSR 415 Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 247 LEGIIPALETSHALA+LEKLCPTLPNGTKVVLNCSGRGDKDV TAIK+L Sbjct: 416 LEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHL 464 >gb|AFK35529.1| unknown [Lotus japonicus] Length = 417 Score = 442 bits (1136), Expect = e-122 Identities = 211/228 (92%), Positives = 224/228 (98%) Frame = -1 Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754 GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREF AVIGKETRKQA+EKWG Sbjct: 187 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFQAVIGKETRKQALEKWG 246 Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574 GKPD+LVACVGGGSNAMGLFHEF+DD DVRLIGVEAAG G++SG+HAATLTKGE+GVLHG Sbjct: 247 GKPDILVACVGGGSNAMGLFHEFIDDKDVRLIGVEAAGLGLESGKHAATLTKGEIGVLHG 306 Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD+GRAEYYS+TD+EALEAFKRLSQ Sbjct: 307 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYYSVTDEEALEAFKRLSQ 366 Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKY 250 LEGIIPALETSHALAYLEKLCPTLPNGTKVV+NCSGRGDKDVQTA KY Sbjct: 367 LEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTASKY 414 >ref|XP_003600046.1| Tryptophan synthase beta chain [Medicago truncatula] gi|355489094|gb|AES70297.1| Tryptophan synthase beta chain [Medicago truncatula] Length = 412 Score = 441 bits (1134), Expect = e-121 Identities = 210/229 (91%), Positives = 225/229 (98%) Frame = -1 Query: 933 GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAIEKWG 754 GTATLKDATSEAIRDWVTNVE+THYILGSV GPHPYPMMVREFHAVIGKETRKQA+EKWG Sbjct: 182 GTATLKDATSEAIRDWVTNVETTHYILGSVCGPHPYPMMVREFHAVIGKETRKQALEKWG 241 Query: 753 GKPDVLVACVGGGSNAMGLFHEFVDDSDVRLIGVEAAGHGVDSGRHAATLTKGEVGVLHG 574 GKPD+LVACVGGGSNA+GLFHEF+DD DVRLIGVEA+G G++SG+HAATLTKGEVGVLHG Sbjct: 242 GKPDILVACVGGGSNAIGLFHEFIDDKDVRLIGVEASGLGLESGKHAATLTKGEVGVLHG 301 Query: 573 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDIGRAEYYSITDDEALEAFKRLSQ 394 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD GRAEYYS+TD+EALEAFKR+SQ Sbjct: 302 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDAGRAEYYSVTDEEALEAFKRVSQ 361 Query: 393 LEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYL 247 LEGIIPALETSHALAYLEKLCPTLPNGTKVV+NCSGRGDKDVQTA+KYL Sbjct: 362 LEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTAMKYL 410