BLASTX nr result
ID: Coptis21_contig00002857
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002857 (1391 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain... 349 1e-93 ref|XP_002331442.1| methyl binding domain protein [Populus trich... 333 5e-89 ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-contain... 306 8e-81 ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain... 305 2e-80 ref|XP_002308125.1| methyl binding domain protein [Populus trich... 301 3e-79 >ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis vinifera] gi|297736061|emb|CBI24099.3| unnamed protein product [Vitis vinifera] Length = 354 Score = 349 bits (895), Expect = 1e-93 Identities = 190/351 (54%), Positives = 227/351 (64%), Gaps = 21/351 (5%) Frame = +2 Query: 158 QEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQFYDNGQNQLVLYNPEA 337 +E+ L SS P L D L+ P++ S ++EE + +N Y+N NQLV+Y+P A Sbjct: 13 KEENDLTGSSLPRYL-DALQVPIDLSSSEEEEEDFYAEEDDDNHSYENTSNQLVVYDPVA 71 Query: 338 NGTVEEEXXXXXXXXXXXX----------SRVLPSVGAFTVQCASCFKWRLIPTKEKYEE 487 N E E SRVLPSVGAFTVQCA+CFKWRLIPTKEKYEE Sbjct: 72 NSATEVEPVPDPIQYRLPSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRLIPTKEKYEE 131 Query: 488 IRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIRG 667 IRE IL+ PFVCE AREWRP++SCDDPADISQDGSR+WAIDKPNI+QPP GW+R LRIRG Sbjct: 132 IREHILEQPFVCETAREWRPNVSCDDPADISQDGSRLWAIDKPNIAQPPAGWQRLLRIRG 191 Query: 668 EGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVRK 847 EGST+FADVYY+APSGKR RSMVE+QKYLL+HPEY+ GV +SQFSFQIPKPLQE+YVRK Sbjct: 192 EGSTKFADVYYVAPSGKRLRSMVEVQKYLLEHPEYMVHGVTLSQFSFQIPKPLQENYVRK 251 Query: 848 RP----------RNEFSITRHLEPSDVNPLSWASPLNGSDLQLGQPGMSATY-EEPVLPK 994 RP ++R LEP +VNPLSWA P DLQL PG+SA Y E PV Sbjct: 252 RPARVNAGSYDDTTSSGMSRPLEPGEVNPLSWAGPAECIDLQLRTPGLSAPYFEAPVFDP 311 Query: 995 APSGKKKASRSPPPLLPMIPLAGKKKARTPSKHKHKNHTPSNQPLIKVEEP 1147 K+A R+ P + + ++ NQ +KVEEP Sbjct: 312 VSRPTKQARRTLP------------------RDMYDSNMVYNQQKVKVEEP 344 >ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa] gi|222873656|gb|EEF10787.1| methyl binding domain protein [Populus trichocarpa] Length = 343 Score = 333 bits (855), Expect = 5e-89 Identities = 182/357 (50%), Positives = 226/357 (63%), Gaps = 15/357 (4%) Frame = +2 Query: 122 ESNVRDASPIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQFYDN 301 +S+ + ++K+E S L +L++P+ S +++ + + ++Q ++ Sbjct: 2 QSHPGETFHVLKKEGDDCTGSRYTGHLNSSLQEPIEVSSSSNEDNSD-DTWDIDDQSIED 60 Query: 302 GQNQLVLYNPEANGTVEEEXXXXXXXXXXXX---------SRVLPSVGAFTVQCASCFKW 454 QLVLY+P AN E E SRVLPSVGAFTVQCA CFKW Sbjct: 61 SSKQLVLYDPLANDAGEIEPVPQPILSHHPFRRYSDLNVPSRVLPSVGAFTVQCAKCFKW 120 Query: 455 RLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPP 634 RLIPTK+KYEE+RE IL+ PF CE AREWRPDISCDDP DI QDGSR+WAIDKPNI+QPP Sbjct: 121 RLIPTKQKYEELREHILEEPFFCETAREWRPDISCDDPTDIDQDGSRLWAIDKPNIAQPP 180 Query: 635 QGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQI 814 GW+R LRIRGEGST+FADVYY APSGKR RSMVEIQKYL++HPEY+RDG+ ++QFSFQI Sbjct: 181 PGWQRLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLIEHPEYMRDGITLTQFSFQI 240 Query: 815 PKPLQEDYVR-KRPRNEFSITRHLEPSDVNPLSWASPLNGSDLQLGQPGMSATYEEPVLP 991 PKPLQE+YVR KRPR S LEP + NPL W P + ++LQLG+P + Sbjct: 241 PKPLQENYVRKKRPRLSASC---LEPGEANPLKWVGPGDCTELQLGRPAI---------- 287 Query: 992 KAPSGKKKASRSPPPLL---PMIPL--AGKKKARTPSKHKHKNHTPSNQPLIKVEEP 1147 PPPL+ +P KKKARTPSK H+ + N KVEEP Sbjct: 288 -----------LPPPLIQSSAYLPFYWPVKKKARTPSKQSHRTNPVCNLDEPKVEEP 333 >ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Cucumis sativus] Length = 342 Score = 306 bits (784), Expect = 8e-81 Identities = 173/366 (47%), Positives = 223/366 (60%), Gaps = 11/366 (3%) Frame = +2 Query: 77 EASHLGDASKLGNDEESNVRDASPIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEE 256 E + L + S L ND+E+ +D V L+ SSS + L +T + + Sbjct: 5 EENDLNEPS-LSNDQETPRQDVIA-VSSSSSSLSSSSSENELHETRNENV---------- 52 Query: 257 VELQIMEQENQFYDNGQNQLVLYNPEANG---------TVEEEXXXXXXXXXXXXSRVLP 409 ++Q DN +LV+Y+P A+ V+++ SRVLP Sbjct: 53 --------QSQSNDNPSRELVIYDPSADDGHANDPVSTPVKQQPSPVLGHLTPNSSRVLP 104 Query: 410 SVGAFTVQCASCFKWRLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDG 589 SVGAFTVQCA CFKWRLIPTKEKYEEIRE +L+ PF CE AR WRPDISCDDPADI+QDG Sbjct: 105 SVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDG 164 Query: 590 SRVWAIDKPNISQPPQGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPE 769 SR+WAIDKPNI+QPP GW+R L IRGEGST+FADVYY APSGK+ RSMV+IQKYL++HPE Sbjct: 165 SRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPE 224 Query: 770 YLRDGVNMSQFSFQIPKPLQEDYVRKR--PRNEFSITRHLEPSDVNPLSWASPLNGSDLQ 943 Y +GV+M++FSFQIPKPL+EDYVRKR N LE +V P+SWA P + + LQ Sbjct: 225 YQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDASKLESGEVRPISWARPDDSTALQ 284 Query: 944 LGQPGMSATYEEPVLPKAPSGKKKASRSPPPLLPMIPLAGKKKARTPSKHKHKNHTPSNQ 1123 LG+PG++ +L +P P+ A K K + + + T + Sbjct: 285 LGKPGLT-----ELLSTSPVNN-----------PVTRPAKKVKRALAQEMRRSSLTSTEP 328 Query: 1124 PLIKVE 1141 P IK+E Sbjct: 329 PAIKLE 334 >ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Glycine max] Length = 309 Score = 305 bits (781), Expect = 2e-80 Identities = 166/302 (54%), Positives = 201/302 (66%), Gaps = 16/302 (5%) Frame = +2 Query: 155 KQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQFYDNGQNQLVLYNPE 334 K E L SS S +L P++ S DDE + N D+ NQLVLY+P Sbjct: 11 KNEVKDLTGSSLTSYKHSSLLDPIDVSSSSDDEN------DLPN---DDVSNQLVLYDPV 61 Query: 335 ANGT--VE--------EEXXXXXXXXXXXXSRVLPSVGAFTVQCASCFKWRLIPTKEKYE 484 ANG +E E RVLPSVGAFTVQCASCFKWRLIPTKEKYE Sbjct: 62 ANGNNAIELAPDPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCFKWRLIPTKEKYE 121 Query: 485 EIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIR 664 EIRE IL+ PFVC+ AREWRP +SCDDP DISQDGSRVWAIDKPNI+QPP GW+R LRIR Sbjct: 122 EIREHILEQPFVCQKAREWRPHVSCDDPEDISQDGSRVWAIDKPNIAQPPAGWERLLRIR 181 Query: 665 GEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVR 844 EGS++FAD+YY+APSGKR RSMVEIQK+L++HPEY RDGV +SQFSFQIP+PLQE+YVR Sbjct: 182 AEGSSKFADIYYIAPSGKRLRSMVEIQKFLMEHPEYTRDGVTLSQFSFQIPRPLQENYVR 241 Query: 845 KRP---RNEFSITRHLEPSDVNPLSWASPLNGSDLQLGQPG---MSATYEEPVLPKAPSG 1006 KRP + + ++ +E V+PL+W P G +LG P M + +P+ PS Sbjct: 242 KRPARLTSSYEVSEPVEHEQVSPLAWVDP-EGHGRRLGLPAPPFMESHDIDPISISRPSK 300 Query: 1007 KK 1012 ++ Sbjct: 301 RQ 302 >ref|XP_002308125.1| methyl binding domain protein [Populus trichocarpa] gi|222854101|gb|EEE91648.1| methyl binding domain protein [Populus trichocarpa] Length = 328 Score = 301 bits (771), Expect = 3e-79 Identities = 158/318 (49%), Positives = 208/318 (65%), Gaps = 12/318 (3%) Frame = +2 Query: 122 ESNVRDASPIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQFYDN 301 +S + +VK+E +S L+ TL++P+ S +D + ++ + ++ Sbjct: 2 QSRPEETIRMVKKEADCCTDSCHTGHLQSTLQEPIEVSSSNEDNSHDTGDIDDPS--IED 59 Query: 302 GQNQLVLYNPEANGT---------VEEEXXXXXXXXXXXXSRVLPSVGAFTVQCASCFKW 454 QLVLY+P NG ++ + SRVLPSVG FTVQCA CFKW Sbjct: 60 SSKQLVLYDPVTNGAGQIEPVPQPIQFQRPFRRYSDPNVPSRVLPSVGTFTVQCAKCFKW 119 Query: 455 RLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPP 634 RLIPTK+KYEE+RE IL+ PF CE AR WRPDISCDDP DI+QDGSR+WAIDKPNI+QPP Sbjct: 120 RLIPTKKKYEELREHILEEPFFCETARGWRPDISCDDPTDITQDGSRLWAIDKPNIAQPP 179 Query: 635 QGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQI 814 GW+R LRIRGEGS++FADVYY +PSGKR RSMVE+QKYL++HPEY+ GV +SQFSFQI Sbjct: 180 PGWQRLLRIRGEGSSKFADVYYQSPSGKRLRSMVEVQKYLIEHPEYMTYGVTLSQFSFQI 239 Query: 815 PKPLQEDYVRKRPRN---EFSITRHLEPSDVNPLSWASPLNGSDLQLGQPGMSATYEEPV 985 PKPLQE+YVRKR + TRHL+P + + ++LQLG+P S +++ PV Sbjct: 240 PKPLQENYVRKRRPSISASCDYTRHLQPGEG---------DFTELQLGRPA-SPSFDRPV 289 Query: 986 LPKAPSGKKKASRSPPPL 1039 KA + K+ R+ P+ Sbjct: 290 KKKAGTQSKQDYRTANPV 307