BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002857
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   349   1e-93
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   333   5e-89
ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-contain...   306   8e-81
ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain...   305   2e-80
ref|XP_002308125.1| methyl binding domain protein [Populus trich...   301   3e-79

>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
            vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  349 bits (895), Expect = 1e-93
 Identities = 190/351 (54%), Positives = 227/351 (64%), Gaps = 21/351 (5%)
 Frame = +2

Query: 158  QEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQFYDNGQNQLVLYNPEA 337
            +E+  L  SS P  L D L+ P++ S   ++EE      + +N  Y+N  NQLV+Y+P A
Sbjct: 13   KEENDLTGSSLPRYL-DALQVPIDLSSSEEEEEDFYAEEDDDNHSYENTSNQLVVYDPVA 71

Query: 338  NGTVEEEXXXXXXXXXXXX----------SRVLPSVGAFTVQCASCFKWRLIPTKEKYEE 487
            N   E E                      SRVLPSVGAFTVQCA+CFKWRLIPTKEKYEE
Sbjct: 72   NSATEVEPVPDPIQYRLPSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRLIPTKEKYEE 131

Query: 488  IRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIRG 667
            IRE IL+ PFVCE AREWRP++SCDDPADISQDGSR+WAIDKPNI+QPP GW+R LRIRG
Sbjct: 132  IREHILEQPFVCETAREWRPNVSCDDPADISQDGSRLWAIDKPNIAQPPAGWQRLLRIRG 191

Query: 668  EGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVRK 847
            EGST+FADVYY+APSGKR RSMVE+QKYLL+HPEY+  GV +SQFSFQIPKPLQE+YVRK
Sbjct: 192  EGSTKFADVYYVAPSGKRLRSMVEVQKYLLEHPEYMVHGVTLSQFSFQIPKPLQENYVRK 251

Query: 848  RP----------RNEFSITRHLEPSDVNPLSWASPLNGSDLQLGQPGMSATY-EEPVLPK 994
            RP               ++R LEP +VNPLSWA P    DLQL  PG+SA Y E PV   
Sbjct: 252  RPARVNAGSYDDTTSSGMSRPLEPGEVNPLSWAGPAECIDLQLRTPGLSAPYFEAPVFDP 311

Query: 995  APSGKKKASRSPPPLLPMIPLAGKKKARTPSKHKHKNHTPSNQPLIKVEEP 1147
                 K+A R+ P                  +  + ++   NQ  +KVEEP
Sbjct: 312  VSRPTKQARRTLP------------------RDMYDSNMVYNQQKVKVEEP 344


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
            gi|222873656|gb|EEF10787.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 343

 Score =  333 bits (855), Expect = 5e-89
 Identities = 182/357 (50%), Positives = 226/357 (63%), Gaps = 15/357 (4%)
 Frame = +2

Query: 122  ESNVRDASPIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQFYDN 301
            +S+  +   ++K+E      S     L  +L++P+  S   +++  +    + ++Q  ++
Sbjct: 2    QSHPGETFHVLKKEGDDCTGSRYTGHLNSSLQEPIEVSSSSNEDNSD-DTWDIDDQSIED 60

Query: 302  GQNQLVLYNPEANGTVEEEXXXXXXXXXXXX---------SRVLPSVGAFTVQCASCFKW 454
               QLVLY+P AN   E E                     SRVLPSVGAFTVQCA CFKW
Sbjct: 61   SSKQLVLYDPLANDAGEIEPVPQPILSHHPFRRYSDLNVPSRVLPSVGAFTVQCAKCFKW 120

Query: 455  RLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPP 634
            RLIPTK+KYEE+RE IL+ PF CE AREWRPDISCDDP DI QDGSR+WAIDKPNI+QPP
Sbjct: 121  RLIPTKQKYEELREHILEEPFFCETAREWRPDISCDDPTDIDQDGSRLWAIDKPNIAQPP 180

Query: 635  QGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQI 814
             GW+R LRIRGEGST+FADVYY APSGKR RSMVEIQKYL++HPEY+RDG+ ++QFSFQI
Sbjct: 181  PGWQRLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLIEHPEYMRDGITLTQFSFQI 240

Query: 815  PKPLQEDYVR-KRPRNEFSITRHLEPSDVNPLSWASPLNGSDLQLGQPGMSATYEEPVLP 991
            PKPLQE+YVR KRPR   S    LEP + NPL W  P + ++LQLG+P +          
Sbjct: 241  PKPLQENYVRKKRPRLSASC---LEPGEANPLKWVGPGDCTELQLGRPAI---------- 287

Query: 992  KAPSGKKKASRSPPPLL---PMIPL--AGKKKARTPSKHKHKNHTPSNQPLIKVEEP 1147
                        PPPL+     +P     KKKARTPSK  H+ +   N    KVEEP
Sbjct: 288  -----------LPPPLIQSSAYLPFYWPVKKKARTPSKQSHRTNPVCNLDEPKVEEP 333


>ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Cucumis sativus]
          Length = 342

 Score =  306 bits (784), Expect = 8e-81
 Identities = 173/366 (47%), Positives = 223/366 (60%), Gaps = 11/366 (3%)
 Frame = +2

Query: 77   EASHLGDASKLGNDEESNVRDASPIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEE 256
            E + L + S L ND+E+  +D    V      L+ SSS + L +T  + +          
Sbjct: 5    EENDLNEPS-LSNDQETPRQDVIA-VSSSSSSLSSSSSENELHETRNENV---------- 52

Query: 257  VELQIMEQENQFYDNGQNQLVLYNPEANG---------TVEEEXXXXXXXXXXXXSRVLP 409
                    ++Q  DN   +LV+Y+P A+           V+++            SRVLP
Sbjct: 53   --------QSQSNDNPSRELVIYDPSADDGHANDPVSTPVKQQPSPVLGHLTPNSSRVLP 104

Query: 410  SVGAFTVQCASCFKWRLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDG 589
            SVGAFTVQCA CFKWRLIPTKEKYEEIRE +L+ PF CE AR WRPDISCDDPADI+QDG
Sbjct: 105  SVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDG 164

Query: 590  SRVWAIDKPNISQPPQGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPE 769
            SR+WAIDKPNI+QPP GW+R L IRGEGST+FADVYY APSGK+ RSMV+IQKYL++HPE
Sbjct: 165  SRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPE 224

Query: 770  YLRDGVNMSQFSFQIPKPLQEDYVRKR--PRNEFSITRHLEPSDVNPLSWASPLNGSDLQ 943
            Y  +GV+M++FSFQIPKPL+EDYVRKR    N       LE  +V P+SWA P + + LQ
Sbjct: 225  YQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDASKLESGEVRPISWARPDDSTALQ 284

Query: 944  LGQPGMSATYEEPVLPKAPSGKKKASRSPPPLLPMIPLAGKKKARTPSKHKHKNHTPSNQ 1123
            LG+PG++      +L  +P              P+   A K K     + +  + T +  
Sbjct: 285  LGKPGLT-----ELLSTSPVNN-----------PVTRPAKKVKRALAQEMRRSSLTSTEP 328

Query: 1124 PLIKVE 1141
            P IK+E
Sbjct: 329  PAIKLE 334


>ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Glycine max]
          Length = 309

 Score =  305 bits (781), Expect = 2e-80
 Identities = 166/302 (54%), Positives = 201/302 (66%), Gaps = 16/302 (5%)
 Frame = +2

Query: 155  KQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQFYDNGQNQLVLYNPE 334
            K E   L  SS  S    +L  P++ S   DDE       +  N   D+  NQLVLY+P 
Sbjct: 11   KNEVKDLTGSSLTSYKHSSLLDPIDVSSSSDDEN------DLPN---DDVSNQLVLYDPV 61

Query: 335  ANGT--VE--------EEXXXXXXXXXXXXSRVLPSVGAFTVQCASCFKWRLIPTKEKYE 484
            ANG   +E        E              RVLPSVGAFTVQCASCFKWRLIPTKEKYE
Sbjct: 62   ANGNNAIELAPDPLQCEHPLLPRSKPSHSVPRVLPSVGAFTVQCASCFKWRLIPTKEKYE 121

Query: 485  EIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPPQGWKRELRIR 664
            EIRE IL+ PFVC+ AREWRP +SCDDP DISQDGSRVWAIDKPNI+QPP GW+R LRIR
Sbjct: 122  EIREHILEQPFVCQKAREWRPHVSCDDPEDISQDGSRVWAIDKPNIAQPPAGWERLLRIR 181

Query: 665  GEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQIPKPLQEDYVR 844
             EGS++FAD+YY+APSGKR RSMVEIQK+L++HPEY RDGV +SQFSFQIP+PLQE+YVR
Sbjct: 182  AEGSSKFADIYYIAPSGKRLRSMVEIQKFLMEHPEYTRDGVTLSQFSFQIPRPLQENYVR 241

Query: 845  KRP---RNEFSITRHLEPSDVNPLSWASPLNGSDLQLGQPG---MSATYEEPVLPKAPSG 1006
            KRP    + + ++  +E   V+PL+W  P  G   +LG P    M +   +P+    PS 
Sbjct: 242  KRPARLTSSYEVSEPVEHEQVSPLAWVDP-EGHGRRLGLPAPPFMESHDIDPISISRPSK 300

Query: 1007 KK 1012
            ++
Sbjct: 301  RQ 302


>ref|XP_002308125.1| methyl binding domain protein [Populus trichocarpa]
            gi|222854101|gb|EEE91648.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 328

 Score =  301 bits (771), Expect = 3e-79
 Identities = 158/318 (49%), Positives = 208/318 (65%), Gaps = 12/318 (3%)
 Frame = +2

Query: 122  ESNVRDASPIVKQEKGQLAESSSPSRLEDTLEKPLNASLLGDDEEVELQIMEQENQFYDN 301
            +S   +   +VK+E     +S     L+ TL++P+  S   +D   +   ++  +   ++
Sbjct: 2    QSRPEETIRMVKKEADCCTDSCHTGHLQSTLQEPIEVSSSNEDNSHDTGDIDDPS--IED 59

Query: 302  GQNQLVLYNPEANGT---------VEEEXXXXXXXXXXXXSRVLPSVGAFTVQCASCFKW 454
               QLVLY+P  NG          ++ +            SRVLPSVG FTVQCA CFKW
Sbjct: 60   SSKQLVLYDPVTNGAGQIEPVPQPIQFQRPFRRYSDPNVPSRVLPSVGTFTVQCAKCFKW 119

Query: 455  RLIPTKEKYEEIRESILQIPFVCEIAREWRPDISCDDPADISQDGSRVWAIDKPNISQPP 634
            RLIPTK+KYEE+RE IL+ PF CE AR WRPDISCDDP DI+QDGSR+WAIDKPNI+QPP
Sbjct: 120  RLIPTKKKYEELREHILEEPFFCETARGWRPDISCDDPTDITQDGSRLWAIDKPNIAQPP 179

Query: 635  QGWKRELRIRGEGSTRFADVYYMAPSGKRFRSMVEIQKYLLDHPEYLRDGVNMSQFSFQI 814
             GW+R LRIRGEGS++FADVYY +PSGKR RSMVE+QKYL++HPEY+  GV +SQFSFQI
Sbjct: 180  PGWQRLLRIRGEGSSKFADVYYQSPSGKRLRSMVEVQKYLIEHPEYMTYGVTLSQFSFQI 239

Query: 815  PKPLQEDYVRKRPRN---EFSITRHLEPSDVNPLSWASPLNGSDLQLGQPGMSATYEEPV 985
            PKPLQE+YVRKR  +       TRHL+P +          + ++LQLG+P  S +++ PV
Sbjct: 240  PKPLQENYVRKRRPSISASCDYTRHLQPGEG---------DFTELQLGRPA-SPSFDRPV 289

Query: 986  LPKAPSGKKKASRSPPPL 1039
              KA +  K+  R+  P+
Sbjct: 290  KKKAGTQSKQDYRTANPV 307