BLASTX nr result

ID: Coptis21_contig00002852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002852
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22977.3| unnamed protein product [Vitis vinifera]              330   2e-88
ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like ...   330   2e-88
ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259...   329   4e-88
emb|CBI39539.3| unnamed protein product [Vitis vinifera]              329   4e-88
emb|CAN65685.1| hypothetical protein VITISV_022459 [Vitis vinifera]   329   4e-88

>emb|CBI22977.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  330 bits (846), Expect = 2e-88
 Identities = 164/179 (91%), Positives = 172/179 (96%)
 Frame = -1

Query: 792 GKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMSKVNKPPMSLSRLI 613
           GKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMSK+NKPPMSLSRLI
Sbjct: 76  GKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKPPMSLSRLI 135

Query: 612 RYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKAGGECFTFDQLALK 433
           RYM+GKE KIAVLVGTVTDD RVYEVP LK+TALRFTE ARARIEKAGGEC TFDQLAL+
Sbjct: 136 RYMQGKEDKIAVLVGTVTDDLRVYEVPTLKVTALRFTERARARIEKAGGECLTFDQLALR 195

Query: 432 APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFKV 256
           APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFE+ARGRR SRGF+V
Sbjct: 196 APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 254


>ref|XP_002270635.1| PREDICTED: 60S ribosomal protein L18-2-like [Vitis vinifera]
          Length = 187

 Score =  330 bits (846), Expect = 2e-88
 Identities = 164/179 (91%), Positives = 172/179 (96%)
 Frame = -1

Query: 792 GKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMSKVNKPPMSLSRLI 613
           GKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMSK+NKPPMSLSRLI
Sbjct: 9   GKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKINKPPMSLSRLI 68

Query: 612 RYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKAGGECFTFDQLALK 433
           RYM+GKE KIAVLVGTVTDD RVYEVP LK+TALRFTE ARARIEKAGGEC TFDQLAL+
Sbjct: 69  RYMQGKEDKIAVLVGTVTDDLRVYEVPTLKVTALRFTERARARIEKAGGECLTFDQLALR 128

Query: 432 APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFKV 256
           APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFE+ARGRR SRGF+V
Sbjct: 129 APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 187


>ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259659 [Vitis vinifera]
          Length = 429

 Score =  329 bits (844), Expect = 4e-88
 Identities = 163/179 (91%), Positives = 173/179 (96%)
 Frame = -1

Query: 792 GKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMSKVNKPPMSLSRLI 613
           GKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMSKVNKPP+SLSRL+
Sbjct: 251 GKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLV 310

Query: 612 RYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKAGGECFTFDQLALK 433
           RYM GKE KIAV+VGTVTDD RVYEVPALK+TALRFTETARARIEKAGGEC TFDQLAL+
Sbjct: 311 RYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALR 370

Query: 432 APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFKV 256
           APLGQNTVLLRGPKN+REAVKHFGKAPGVPHSHTKPYVRSKGRKFE+ARGRR SRGF+V
Sbjct: 371 APLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 429


>emb|CBI39539.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  329 bits (844), Expect = 4e-88
 Identities = 163/179 (91%), Positives = 173/179 (96%)
 Frame = -1

Query: 792 GKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMSKVNKPPMSLSRLI 613
           GKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMSKVNKPP+SLSRL+
Sbjct: 71  GKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLV 130

Query: 612 RYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKAGGECFTFDQLALK 433
           RYM GKE KIAV+VGTVTDD RVYEVPALK+TALRFTETARARIEKAGGEC TFDQLAL+
Sbjct: 131 RYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALR 190

Query: 432 APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFKV 256
           APLGQNTVLLRGPKN+REAVKHFGKAPGVPHSHTKPYVRSKGRKFE+ARGRR SRGF+V
Sbjct: 191 APLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 249


>emb|CAN65685.1| hypothetical protein VITISV_022459 [Vitis vinifera]
          Length = 187

 Score =  329 bits (844), Expect = 4e-88
 Identities = 163/179 (91%), Positives = 173/179 (96%)
 Frame = -1

Query: 792 GKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTSSRFNAVILKRLFMSKVNKPPMSLSRLI 613
           GKSKKTKRTAPKS+DIYLKLLVKLYRFLVRRT S+FNAVILKRLFMSKVNKPP+SLSRL+
Sbjct: 9   GKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKPPLSLSRLV 68

Query: 612 RYMKGKESKIAVLVGTVTDDTRVYEVPALKITALRFTETARARIEKAGGECFTFDQLALK 433
           RYM GKE KIAV+VGTVTDD RVYEVPALK+TALRFTETARARIEKAGGEC TFDQLAL+
Sbjct: 69  RYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALR 128

Query: 432 APLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFKV 256
           APLGQNTVLLRGPKN+REAVKHFGKAPGVPHSHTKPYVRSKGRKFE+ARGRR SRGF+V
Sbjct: 129 APLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRRNSRGFRV 187


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