BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002851
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory pr...   268   e-111
ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory pr...   266   e-109
emb|CBI40495.3| unnamed protein product [Vitis vinifera]              266   e-109
emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]   256   e-106
ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory pr...   263   e-105

>ref|XP_002264648.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera] gi|296088996|emb|CBI38699.3| unnamed protein
           product [Vitis vinifera]
          Length = 327

 Score =  268 bits (684), Expect(2) = e-111
 Identities = 126/177 (71%), Positives = 145/177 (81%)
 Frame = +3

Query: 81  GDNKYQVDVGNLMAFDPHHHFTCLPPTREALSEECLRRGTELVQAIANSLFSLPSTEDQD 260
           G  ++Q+D+G+L+AFDP HHF   P +RE L +ECL++GTELVQ+IA++LF+LPSTED D
Sbjct: 2   GTQEHQIDLGHLLAFDPLHHFPSPPSSREELVKECLQKGTELVQSIADTLFNLPSTEDID 61

Query: 261 GPLVHLPPPVTRLPREKHLPRPKPPTKWEQFAQKKGIKNRKKDKVVYDEQTATWKRRHGY 440
           GPLV LPPP TRLPREKHLP+PKPPTKWE FA+ KGIKNRKKDK+VYDEQT TWKRRHGY
Sbjct: 62  GPLVKLPPPTTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGY 121

Query: 441 DRVNDDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXXNRLQNLKQAAKVGALP 611
           DRVNDD D+PIIEAKMTDE G+DPFA               NRLQNLKQAAKVGALP
Sbjct: 122 DRVNDDEDIPIIEAKMTDEAGEDPFAKRRAEKKKRVEKQGKNRLQNLKQAAKVGALP 178



 Score =  160 bits (405), Expect(2) = e-111
 Identities = 80/113 (70%), Positives = 90/113 (79%)
 Frame = +2

Query: 662  KVGALPSHVQLAAKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXXKFDKKLPGEKPA 841
            KVGALPSH+QLAA ALPITGTQ+A  K+SK ELEDV            KFDKKLPGEKP 
Sbjct: 173  KVGALPSHIQLAATALPITGTQTAPKKVSKNELEDVASMAATATASGGKFDKKLPGEKPE 232

Query: 842  KHPGKFRKFLPVAEGTGMGSQEKQQTDMVLNKLISMHSHEILNVDKAVTMFNV 1000
            KH GK+RKFLPV EGTG+GS EKQQT+ +LNKLIS +SHEILNVDKA+ M+NV
Sbjct: 233  KHKGKYRKFLPVVEGTGIGSLEKQQTEKILNKLISKNSHEILNVDKAINMYNV 285


>ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera]
          Length = 331

 Score =  266 bits (681), Expect(2) = e-109
 Identities = 126/179 (70%), Positives = 145/179 (81%)
 Frame = +3

Query: 75  GGGDNKYQVDVGNLMAFDPHHHFTCLPPTREALSEECLRRGTELVQAIANSLFSLPSTED 254
           G    ++Q+D+G+LMAFDP HHF   P +RE L +ECL++GT LVQ IA++LF+LPSTED
Sbjct: 3   GMDTQEHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTED 62

Query: 255 QDGPLVHLPPPVTRLPREKHLPRPKPPTKWEQFAQKKGIKNRKKDKVVYDEQTATWKRRH 434
            DGPLV LPPP+TRLPREKHLP+PKPPTKWE FA+ KGIKNRKKDK+VYDEQT TWKRRH
Sbjct: 63  IDGPLVKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRH 122

Query: 435 GYDRVNDDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXXNRLQNLKQAAKVGALP 611
           GYDRVNDD+D+PIIEAKMTDEPG+DPF                NRLQNLKQAAKVGALP
Sbjct: 123 GYDRVNDDKDIPIIEAKMTDEPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALP 181



 Score =  156 bits (395), Expect(2) = e-109
 Identities = 78/113 (69%), Positives = 89/113 (78%)
 Frame = +2

Query: 662  KVGALPSHVQLAAKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXXKFDKKLPGEKPA 841
            KVGALPSH+QLAA ALPITGTQ+A  K SK EL+D+            KFDKKL GEKP 
Sbjct: 176  KVGALPSHIQLAATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPE 235

Query: 842  KHPGKFRKFLPVAEGTGMGSQEKQQTDMVLNKLISMHSHEILNVDKAVTMFNV 1000
            KH GK+RKFLPV EGTG+GSQEKQQT+ VLN+LIS +SHEILNVDKA+ M+NV
Sbjct: 236  KHKGKYRKFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 288


>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  266 bits (680), Expect(2) = e-109
 Identities = 125/174 (71%), Positives = 144/174 (82%)
 Frame = +3

Query: 90  KYQVDVGNLMAFDPHHHFTCLPPTREALSEECLRRGTELVQAIANSLFSLPSTEDQDGPL 269
           ++Q+D+G+LMAFDP HHF   P +RE L +ECL++GT LVQ IA++LF+LPSTED DGPL
Sbjct: 5   EHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDIDGPL 64

Query: 270 VHLPPPVTRLPREKHLPRPKPPTKWEQFAQKKGIKNRKKDKVVYDEQTATWKRRHGYDRV 449
           V LPPP+TRLPREKHLP+PKPPTKWE FA+ KGIKNRKKDK+VYDEQT TWKRRHGYDRV
Sbjct: 65  VKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYDRV 124

Query: 450 NDDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXXNRLQNLKQAAKVGALP 611
           NDD+D+PIIEAKMTDEPG+DPF                NRLQNLKQAAKVGALP
Sbjct: 125 NDDKDIPIIEAKMTDEPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALP 178



 Score =  156 bits (395), Expect(2) = e-109
 Identities = 78/113 (69%), Positives = 89/113 (78%)
 Frame = +2

Query: 662  KVGALPSHVQLAAKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXXKFDKKLPGEKPA 841
            KVGALPSH+QLAA ALPITGTQ+A  K SK EL+D+            KFDKKL GEKP 
Sbjct: 173  KVGALPSHIQLAATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPE 232

Query: 842  KHPGKFRKFLPVAEGTGMGSQEKQQTDMVLNKLISMHSHEILNVDKAVTMFNV 1000
            KH GK+RKFLPV EGTG+GSQEKQQT+ VLN+LIS +SHEILNVDKA+ M+NV
Sbjct: 233  KHKGKYRKFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 285


>emb|CAN77790.1| hypothetical protein VITISV_033191 [Vitis vinifera]
          Length = 327

 Score =  256 bits (653), Expect(2) = e-106
 Identities = 123/174 (70%), Positives = 142/174 (81%)
 Frame = +3

Query: 90  KYQVDVGNLMAFDPHHHFTCLPPTREALSEECLRRGTELVQAIANSLFSLPSTEDQDGPL 269
           ++Q+D+G+LMAFDP HHF   P +RE L +ECL++GT LVQ IA++LF+LPSTED DGPL
Sbjct: 5   EHQIDLGHLMAFDPLHHFPSPPTSREELVKECLQKGTVLVQLIADALFNLPSTEDIDGPL 64

Query: 270 VHLPPPVTRLPREKHLPRPKPPTKWEQFAQKKGIKNRKKDKVVYDEQTATWKRRHGYDRV 449
           V LPPP+TRLPREKHLP+PKPPTKWE FA+ KGIKNRKKDK+VYDEQT TWKRRHGYDRV
Sbjct: 65  VKLPPPMTRLPREKHLPKPKPPTKWELFAKAKGIKNRKKDKIVYDEQTGTWKRRHGYDRV 124

Query: 450 NDDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXXNRLQNLKQAAKVGALP 611
           NDD+D+PIIEAKMTD  G+DPF                NRLQNLKQAAKVGALP
Sbjct: 125 NDDKDJPIIEAKMTD-AGEDPFXKRQAEKKKRVEKHEKNRLQNLKQAAKVGALP 177



 Score =  156 bits (395), Expect(2) = e-106
 Identities = 78/113 (69%), Positives = 89/113 (78%)
 Frame = +2

Query: 662  KVGALPSHVQLAAKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXXKFDKKLPGEKPA 841
            KVGALPSH+QLAA ALPITGTQ+A  K SK EL+D+            KFDKKL GEKP 
Sbjct: 172  KVGALPSHIQLAATALPITGTQAAPKKASKNELQDIASMAAAATASGGKFDKKLVGEKPE 231

Query: 842  KHPGKFRKFLPVAEGTGMGSQEKQQTDMVLNKLISMHSHEILNVDKAVTMFNV 1000
            KH GK+RKFLPV EGTG+GSQEKQQT+ VLN+LIS +SHEILNVDKA+ M+NV
Sbjct: 232  KHKGKYRKFLPVVEGTGIGSQEKQQTEKVLNRLISKNSHEILNVDKAINMYNV 284


>ref|XP_004149022.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Cucumis
           sativus] gi|449476004|ref|XP_004154612.1| PREDICTED:
           ribosome biogenesis regulatory protein homolog [Cucumis
           sativus]
          Length = 329

 Score =  263 bits (671), Expect(2) = e-105
 Identities = 125/173 (72%), Positives = 141/173 (81%)
 Frame = +3

Query: 93  YQVDVGNLMAFDPHHHFTCLPPTREALSEECLRRGTELVQAIANSLFSLPSTEDQDGPLV 272
           +Q+D+G+LMAF+PHH F  LP +RE L  ECL++GTELVQ+IAN LF+LPSTED+DGPLV
Sbjct: 9   FQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPSTEDRDGPLV 68

Query: 273 HLPPPVTRLPREKHLPRPKPPTKWEQFAQKKGIKNRKKDKVVYDEQTATWKRRHGYDRVN 452
            LPPP TRLPREK LP+PKPPTKWE FAQKKGIKNRKKDK VYDEQT TWKRRHGYDR N
Sbjct: 69  RLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKRRHGYDRAN 128

Query: 453 DDRDVPIIEAKMTDEPGQDPFAXXXXXXXXXXXXXXXNRLQNLKQAAKVGALP 611
           D+ ++PIIEAKMTDE G+DPFA               NRLQNLKQAAKVGALP
Sbjct: 129 DEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGALP 181



 Score =  147 bits (370), Expect(2) = e-105
 Identities = 73/113 (64%), Positives = 89/113 (78%)
 Frame = +2

Query: 662  KVGALPSHVQLAAKALPITGTQSASNKLSKAELEDVXXXXXXXXXXXXKFDKKLPGEKPA 841
            KVGALPSH+QLAA ALPITGTQ+A  K++K EL +V            KFDKK  GEKPA
Sbjct: 176  KVGALPSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPA 235

Query: 842  KHPGKFRKFLPVAEGTGMGSQEKQQTDMVLNKLISMHSHEILNVDKAVTMFNV 1000
            KH GK+RKFLPV EGTG+GS+E++QT+ VL++LIS +SHEILNV+KAV M+NV
Sbjct: 236  KHQGKYRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNV 288