BLASTX nr result

ID: Coptis21_contig00002848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002848
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282201.1| PREDICTED: short-chain type dehydrogenase/re...   343   3e-92
ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ri...   341   2e-91
dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]         335   9e-90
ref|XP_003548755.1| PREDICTED: short-chain type dehydrogenase/re...   333   4e-89
ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|2...   328   1e-87

>ref|XP_002282201.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Vitis
           vinifera]
          Length = 258

 Score =  343 bits (881), Expect = 3e-92
 Identities = 171/253 (67%), Positives = 203/253 (80%), Gaps = 1/253 (0%)
 Frame = -2

Query: 892 PLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEINTPTL-STPRA 716
           PL+DR+AIVTGASRGIGR  ALHLASLGAK+V+NYT+N + A+ +AAEIN+ +  S+PRA
Sbjct: 6   PLQDRIAIVTGASRGIGRATALHLASLGAKIVINYTSNKAQAELVAAEINSSSSPSSPRA 65

Query: 715 ISVKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVLDSKYPTIANTEISDFDATFNVN 536
           I  +A++SDPTQVK LFDTAEQ F + PHILVNSAGVLD+KYPTIANT + DFD  F++N
Sbjct: 66  IICQADVSDPTQVKSLFDTAEQIFNSPPHILVNSAGVLDAKYPTIANTSLEDFDKIFSIN 125

Query: 535 TKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVETMVKILAKELR 356
           ++GAFLCC+EAANR+ R                L+ GFGAYAASKAAVETM KI+AKEL+
Sbjct: 126 SRGAFLCCREAANRIKRGGAGRIILMSTSLVGSLKPGFGAYAASKAAVETMAKIMAKELK 185

Query: 355 GMKITANCVAPGPIATDMFFEGKSEEQVKRVIDECPLSRLGLTKDIAPIVGFLAGDSSEW 176
           G  IT NCVAPGPIATDMFF GKSEE VK+ I++ PLSRLG TKD+A +VGFLA D  EW
Sbjct: 186 GTGITVNCVAPGPIATDMFFSGKSEEDVKKAIEDSPLSRLGETKDVASVVGFLASDGGEW 245

Query: 175 VNGQVIRANGGYV 137
           VNGQV+R NGGYV
Sbjct: 246 VNGQVVRVNGGYV 258


>ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ricinus communis]
           gi|223535255|gb|EEF36932.1| short-chain type
           dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  341 bits (874), Expect = 2e-91
 Identities = 173/262 (66%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
 Frame = -2

Query: 919 ANSTPTPARPLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEINT 740
           AN     + PL+DRVAIVTG+SRGIG+ IALHLASLGAKLV+NY++N   AD +A ++N+
Sbjct: 7   ANPQNPTSLPLQDRVAIVTGSSRGIGKAIALHLASLGAKLVINYSSNKEQADLVARDVNS 66

Query: 739 PT-LSTPRAISVKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVLDSKYPTIANTEIS 563
            +   +PRAI+V+AN+SDPT VK LFD AE+ F  Q H+ VNSAG LDSKYP+IA+T + 
Sbjct: 67  SSEKDSPRAIAVQANVSDPTHVKFLFDEAERVFGCQVHVFVNSAGTLDSKYPSIADTSLE 126

Query: 562 DFDATFNVNTKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVETM 383
            FD TF++NT+GAFLCCKEAANRL R                LR GFGAYAASKAAVE M
Sbjct: 127 GFDLTFSINTRGAFLCCKEAANRLKRGGGGRIVVLSSSQVGALRPGFGAYAASKAAVEAM 186

Query: 382 VKILAKELRGMKITANCVAPGPIATDMFFEGKSEEQVKRVIDECPLSRLGLTKDIAPIVG 203
           VKILAKEL+G  ITANCVAPGPIATDM+F GK+EEQ++R I ECPL RLG  KD+APIVG
Sbjct: 187 VKILAKELKGTGITANCVAPGPIATDMYFSGKTEEQIQRNIAECPLGRLGEPKDVAPIVG 246

Query: 202 FLAGDSSEWVNGQVIRANGGYV 137
           FLA D+SEWVNGQV+RANGGYV
Sbjct: 247 FLATDASEWVNGQVVRANGGYV 268


>dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]
          Length = 261

 Score =  335 bits (860), Expect = 9e-90
 Identities = 168/262 (64%), Positives = 201/262 (76%)
 Frame = -2

Query: 922 MANSTPTPARPLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEIN 743
           MA       + L +RVAIVTG+SRGIG+ IALHLASLGAKLV+NYT+NS+ AD + ++IN
Sbjct: 1   MAEVNVAQGQNLGNRVAIVTGSSRGIGKAIALHLASLGAKLVINYTSNSTQADDVVSQIN 60

Query: 742 TPTLSTPRAISVKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVLDSKYPTIANTEIS 563
           + T  +PRAI+VKAN+SDP QVK LFD AE  F++  +ILVN AGVLD KYP+I NT + 
Sbjct: 61  S-TSDSPRAIAVKANVSDPDQVKSLFDAAESAFQSPVNILVNCAGVLDGKYPSILNTPLE 119

Query: 562 DFDATFNVNTKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVETM 383
           DFD TF VN +GAF+CCKE ANR+ R                LR GFGAYAASKAAVE M
Sbjct: 120 DFDRTFGVNVRGAFICCKEGANRIQRGGGGRIICLSSSMAVALRPGFGAYAASKAAVEAM 179

Query: 382 VKILAKELRGMKITANCVAPGPIATDMFFEGKSEEQVKRVIDECPLSRLGLTKDIAPIVG 203
           VKILAKEL+G  IT NC APGPIATDMF+EGK+EE +K+ IDECP  RLGL +D+AP+VG
Sbjct: 180 VKILAKELKGTGITVNCAAPGPIATDMFYEGKTEEMIKKAIDECPHGRLGLPEDVAPVVG 239

Query: 202 FLAGDSSEWVNGQVIRANGGYV 137
           FLAGD+SEWVNGQ+IR NGGY+
Sbjct: 240 FLAGDTSEWVNGQIIRVNGGYI 261


>ref|XP_003548755.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Glycine
           max]
          Length = 265

 Score =  333 bits (854), Expect = 4e-89
 Identities = 165/262 (62%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
 Frame = -2

Query: 919 ANSTPTPARPLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEINT 740
           ++ + + ++PL+DRVAIVTG+SRGIGREIALHLASLGA+LV+NYT+NS+ AD +AA+IN 
Sbjct: 4   SSESQSQSKPLQDRVAIVTGSSRGIGREIALHLASLGARLVVNYTSNSAQADSVAAQINA 63

Query: 739 PTLST-PRAISVKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVLDSKYPTIANTEIS 563
            + +T PRA+ V+A++SDP QVK LFD+AE+ F +  HILVNSAGV+D  YP++A+T + 
Sbjct: 64  GSATTTPRAVVVQADVSDPAQVKSLFDSAERAFDSPIHILVNSAGVIDGTYPSVADTTVE 123

Query: 562 DFDATFNVNTKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVETM 383
            FD TF VN +GAF C +EAANRL R                LR G+GAYAASKAAVE M
Sbjct: 124 SFDRTFAVNARGAFACAREAANRLKRGGGGRIILLTTSQVVALRPGYGAYAASKAAVEAM 183

Query: 382 VKILAKELRGMKITANCVAPGPIATDMFFEGKSEEQVKRVIDECPLSRLGLTKDIAPIVG 203
           VKILAKEL+G +ITANCVAPGPIAT+MFFEGK+EE V R++ E PL RLG TKD+AP+VG
Sbjct: 184 VKILAKELKGTQITANCVAPGPIATEMFFEGKTEEVVNRIVQESPLGRLGETKDVAPVVG 243

Query: 202 FLAGDSSEWVNGQVIRANGGYV 137
           FLA D+SEWVNGQ++R NGGY+
Sbjct: 244 FLATDASEWVNGQIVRVNGGYI 265


>ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|222857542|gb|EEE95089.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  328 bits (842), Expect = 1e-87
 Identities = 168/263 (63%), Positives = 204/263 (77%), Gaps = 1/263 (0%)
 Frame = -2

Query: 922 MANSTPTPARPLEDRVAIVTGASRGIGREIALHLASLGAKLVLNYTTNSSLADQLAAEIN 743
           MA  +P  + PL+DRVAIVTG+SRGIG+ IA+HLASLGAKLV+NYT+N   AD +A +IN
Sbjct: 1   MAAQSPLLSLPLQDRVAIVTGSSRGIGKAIAIHLASLGAKLVINYTSNKEQADLVANDIN 60

Query: 742 TPTL-STPRAISVKANISDPTQVKLLFDTAEQFFKTQPHILVNSAGVLDSKYPTIANTEI 566
           +  + +TPRAI  +AN+SDP QVK LFD AE+ F +Q HILVN AGVLD KYP+I NT +
Sbjct: 61  SSCVDNTPRAIVAQANVSDPAQVKFLFDEAERVFGSQLHILVNCAGVLDPKYPSIPNTSL 120

Query: 565 SDFDATFNVNTKGAFLCCKEAANRLTRNXXXXXXXXXXXXXXGLRVGFGAYAASKAAVET 386
            DFD  F+VNT+GAFLCCKEAA+RL                 GL  GFGAYAASKAAVET
Sbjct: 121 EDFDHIFSVNTRGAFLCCKEAASRLKHGGGGRIIVLSSSMVGGLMPGFGAYAASKAAVET 180

Query: 385 MVKILAKELRGMKITANCVAPGPIATDMFFEGKSEEQVKRVIDECPLSRLGLTKDIAPIV 206
           +++ILAKEL+G  ITANCVAPGP+AT+M+F GK+EEQ+K  I+  PL RLG TKDIA +V
Sbjct: 181 IIRILAKELKGTGITANCVAPGPVATEMYFAGKTEEQIKNNIESSPLGRLGETKDIAEVV 240

Query: 205 GFLAGDSSEWVNGQVIRANGGYV 137
           GF+A D+SEW+NGQVIRANGGYV
Sbjct: 241 GFMATDASEWINGQVIRANGGYV 263


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