BLASTX nr result

ID: Coptis21_contig00002839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002839
         (1766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]   278   3e-72
emb|CBI20209.3| unnamed protein product [Vitis vinifera]              276   1e-71
ref|XP_002283052.1| PREDICTED: uncharacterized protein LOC100264...   272   2e-70
ref|XP_002317468.1| predicted protein [Populus trichocarpa] gi|2...   207   9e-51
ref|XP_002330741.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-50

>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score =  278 bits (712), Expect = 3e-72
 Identities = 170/370 (45%), Positives = 230/370 (62%), Gaps = 8/370 (2%)
 Frame = -1

Query: 1745 HLRLMLPASPHNYVPNTLSRPLFIYVMDGYHLQQTVVQANAPVSVLNIRTHSPTFANFFS 1566
            HLRL +P      VP TL  PLF YV+D  HLQ + +Q+   VSV+     S  F++ FS
Sbjct: 2428 HLRLSVPEC----VPGTLLWPLFGYVVDCTHLQPSTMQSIFRVSVMKNVPPSLGFSSSFS 2483

Query: 1565 RVHSARTLQLSDIVGNS--SQRTLKAQVSASLSWNHTIDEELQVDFTSGCIDDMDVKADK 1392
            R+HS   LQ+S   G +  S    ++++ A  S  HT++  +Q+D  S   +       K
Sbjct: 2484 RLHSLGALQMSINAGETLDSDECGESKLGADSSKKHTLNGVVQLDSYSNSGEIYINDHCK 2543

Query: 1391 EIERRKKIGVANKGKAPWNKGRKHSAETRELIKQRTIEALKDPKVRKKMSEGHRPHSDVI 1212
            E +RR+KIG+ANKG+ PWNKGRKHSAETRE I+QRTI+AL+DPKVR+KMSE  R HS+  
Sbjct: 2544 ESQRRRKIGLANKGRVPWNKGRKHSAETREKIRQRTIQALRDPKVRQKMSECPRTHSEQS 2603

Query: 1211 KAKIGLGQRRVWRKRLKLKSIKEKFYHMWSESIAEAAKKGLFDQQELDWDSYXXXXXXXX 1032
            KAKI    RRVW KRLK K  +EKFY  W+ESIA+AAKKG  DQ+ELDWDSY        
Sbjct: 2604 KAKIRSSLRRVWGKRLKWKRSREKFYLSWAESIAKAAKKGGSDQEELDWDSYDKIKEEIA 2663

Query: 1031 XXXXXXXXXXEKAKEITKLLXXXXXXXXXXXXAL---QKKEKEERAKFEGEV---XXXXX 870
                      +KAKE+ K+             A+   +++E+E +A+  GE+        
Sbjct: 2664 LQQLQWAENKKKAKELAKMRAERAARARAEKMAMLAEKRRERERQAEARGEIKRETTRKS 2723

Query: 869  XXXXXQILISKGLKLKARITKIRQKKSIDGQVSVPGDVPTSRQPAIEKLDLEFIKREKSR 690
                 ++ ++KGLKLK R+TK+ +KKSI+GQV+   ++  S+ PA EKLDLEFIKRE+ +
Sbjct: 2724 KEDKEELAVAKGLKLKERLTKLHKKKSINGQVASLREMVISQIPACEKLDLEFIKRERMQ 2783

Query: 689  KELSLADQIR 660
            +E+SLADQIR
Sbjct: 2784 REVSLADQIR 2793


>emb|CBI20209.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  276 bits (706), Expect = 1e-71
 Identities = 169/370 (45%), Positives = 229/370 (61%), Gaps = 8/370 (2%)
 Frame = -1

Query: 1745 HLRLMLPASPHNYVPNTLSRPLFIYVMDGYHLQQTVVQANAPVSVLNIRTHSPTFANFFS 1566
            HLRL +P      VP TL  PLF YV+D  HLQ + +Q+   VSV+     S  F++ FS
Sbjct: 5    HLRLSVPEC----VPGTLLWPLFGYVVDCTHLQPSTMQSIFRVSVMKNVPPSLGFSSSFS 60

Query: 1565 RVHSARTLQLSDIVGNS--SQRTLKAQVSASLSWNHTIDEELQVDFTSGCIDDMDVKADK 1392
            R+HS   L +S   G +  S    ++++ A  S  HT++  +Q+D  S   +       K
Sbjct: 61   RLHSLGALPMSINAGETLDSDECGESKLGADSSKKHTLNGVVQLDSYSNSGEIYINDHCK 120

Query: 1391 EIERRKKIGVANKGKAPWNKGRKHSAETRELIKQRTIEALKDPKVRKKMSEGHRPHSDVI 1212
            E +RR+KIG+ANKG+ PWNKGRKHSAETRE I+QRTI+AL+DPKVR+KMSE  R HS+  
Sbjct: 121  ESQRRRKIGLANKGRVPWNKGRKHSAETREKIRQRTIQALRDPKVRQKMSECPRTHSEQS 180

Query: 1211 KAKIGLGQRRVWRKRLKLKSIKEKFYHMWSESIAEAAKKGLFDQQELDWDSYXXXXXXXX 1032
            KAKI    RRVW KRLK K  +EKFY  W+ESIA+AAKKG  DQ+ELDWDSY        
Sbjct: 181  KAKIRSSLRRVWGKRLKWKRSREKFYLSWAESIAKAAKKGGSDQEELDWDSYDKIKEEIA 240

Query: 1031 XXXXXXXXXXEKAKEITKLLXXXXXXXXXXXXAL---QKKEKEERAKFEGEV---XXXXX 870
                      +KAKE+ K+             A+   +++E+E +A+  GE+        
Sbjct: 241  LQQLQWAENKKKAKELAKMRAERAARARAEKMAMLAEKRRERERQAEARGEIKRETTRKS 300

Query: 869  XXXXXQILISKGLKLKARITKIRQKKSIDGQVSVPGDVPTSRQPAIEKLDLEFIKREKSR 690
                 ++ ++KGLKLK R+TK+ +KKSI+GQV+   ++  S+ PA EKLDLEFIKRE+ +
Sbjct: 301  KEDKEELAVAKGLKLKERLTKLHKKKSINGQVASLREMVISQIPACEKLDLEFIKRERMQ 360

Query: 689  KELSLADQIR 660
            +E+SLADQIR
Sbjct: 361  REVSLADQIR 370


>ref|XP_002283052.1| PREDICTED: uncharacterized protein LOC100264054 [Vitis vinifera]
          Length = 470

 Score =  272 bits (695), Expect = 2e-70
 Identities = 164/357 (45%), Positives = 223/357 (62%), Gaps = 8/357 (2%)
 Frame = -1

Query: 1706 VPNTLSRPLFIYVMDGYHLQQTVVQANAPVSVLNIRTHSPTFANFFSRVHSARTLQLSDI 1527
            VP TL  PLF YV+D  HLQ + +Q+   VSV+     S  F++ FSR+HS   L +S  
Sbjct: 85   VPGTLLWPLFGYVVDCTHLQPSTMQSIFRVSVMKNVPPSLGFSSSFSRLHSLGALPMSIN 144

Query: 1526 VGNS--SQRTLKAQVSASLSWNHTIDEELQVDFTSGCIDDMDVKADKEIERRKKIGVANK 1353
             G +  S    ++++ A  S  HT++  +Q+D  S   +       KE +RR+KIG+ANK
Sbjct: 145  AGETLDSDECGESKLGADSSKKHTLNGVVQLDSYSNSGEIYINDHCKESQRRRKIGLANK 204

Query: 1352 GKAPWNKGRKHSAETRELIKQRTIEALKDPKVRKKMSEGHRPHSDVIKAKIGLGQRRVWR 1173
            G+ PWNKGRKHSAETRE I+QRTI+AL+DPKVR+KMSE  R HS+  KAKI    RRVW 
Sbjct: 205  GRVPWNKGRKHSAETREKIRQRTIQALRDPKVRQKMSECPRTHSEQSKAKIRSSLRRVWG 264

Query: 1172 KRLKLKSIKEKFYHMWSESIAEAAKKGLFDQQELDWDSYXXXXXXXXXXXXXXXXXXEKA 993
            KRLK K  +EKFY  W+ESIA+AAKKG  DQ+ELDWDSY                  +KA
Sbjct: 265  KRLKWKRSREKFYLSWAESIAKAAKKGGSDQEELDWDSYDKIKEEIALQQLQWAENKKKA 324

Query: 992  KEITKLLXXXXXXXXXXXXAL---QKKEKEERAKFEGEV---XXXXXXXXXXQILISKGL 831
            KE+ K+             A+   +++E+E +A+  GE+             ++ ++KGL
Sbjct: 325  KELAKMRAERAARARAEKMAMLAEKRRERERQAEARGEIKRETTRKSKEDKEELAVAKGL 384

Query: 830  KLKARITKIRQKKSIDGQVSVPGDVPTSRQPAIEKLDLEFIKREKSRKELSLADQIR 660
            KLK R+TK+ +KKSI+GQV+   ++  S+ PA EKLDLEFIKRE+ ++E+SLADQIR
Sbjct: 385  KLKERLTKLHKKKSINGQVASLREMVISQIPACEKLDLEFIKRERMQREVSLADQIR 441


>ref|XP_002317468.1| predicted protein [Populus trichocarpa] gi|222860533|gb|EEE98080.1|
            predicted protein [Populus trichocarpa]
          Length = 404

 Score =  207 bits (526), Expect = 9e-51
 Identities = 141/371 (38%), Positives = 200/371 (53%), Gaps = 12/371 (3%)
 Frame = -1

Query: 1736 LMLPASPHNYVPNTLSRPLFIYVMDGYHLQQTVVQANAPVSVLNIRTHSPTFANFFSRVH 1557
            L +P  P N+V N L  P   YV++  H Q  V Q+N   S++          + F RV+
Sbjct: 14   LSVPHLPCNHVSNNLLWPTLGYVLEHTHFQPNVQQSNHRNSIVMNTCPICASISTFPRVY 73

Query: 1556 SARTLQLSDIVGNS--SQRTLKAQVSASLSWNHTIDEELQVDF---TSGCIDDMDVKADK 1392
             +  LQ+S  V  +  S +   +++S   +   T+ +E+Q+D    T+  I+D+  K   
Sbjct: 74   DSAALQISVSVRETTGSSKHFHSKISLDSAEKQTLIKEVQLDGYRDTAESINDLPKKG-- 131

Query: 1391 EIERRKKIGVANKGKAPWNKGRKHSAETRELIKQRTIEALKDPKVRKKMSEGHRPHSDVI 1212
              + +KK G  NKG+ PWNKGRKH++ETR LIKQRTIEAL +P+VRKKMS     HS+ I
Sbjct: 132  --KGKKKHG--NKGRIPWNKGRKHTSETRALIKQRTIEALTNPQVRKKMSGHPHAHSEAI 187

Query: 1211 KAKIGLGQRRVWRKRLKLKSIKEKFYHMWSESIAEAAKKGLFDQQELDWDSYXXXXXXXX 1032
            +AKI    R++W KRLK K ++EKF+  WS+SIA AAK+G  DQQELDWD Y        
Sbjct: 188  RAKISSSLRQIWGKRLKWKRLREKFFLSWSKSIARAAKEGGIDQQELDWDGYDKIEEEIT 247

Query: 1031 XXXXXXXXXXEKAKEITK--LLXXXXXXXXXXXXALQKKEKEE-----RAKFEGEVXXXX 873
                       KA+E  K  +               QK+EK E     R + + +     
Sbjct: 248  LKQLQGAIEKAKAEERAKRTVEREAKEREEKMARVAQKREKREEKVKAREEAKRKAHRES 307

Query: 872  XXXXXXQILISKGLKLKARITKIRQKKSIDGQVSVPGDVPTSRQPAIEKLDLEFIKREKS 693
                     +++ L LK R+TKIR++KSI+ Q+   G   TS   A EK+D+E  K EK 
Sbjct: 308  KRKTEESSSVARKLTLKRRLTKIRKRKSINDQMIRQGASLTSHSRAWEKIDVEIKKSEKI 367

Query: 692  RKELSLADQIR 660
            ++E SLA+QIR
Sbjct: 368  QREGSLAEQIR 378


>ref|XP_002330741.1| predicted protein [Populus trichocarpa] gi|222872517|gb|EEF09648.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  206 bits (523), Expect = 2e-50
 Identities = 143/373 (38%), Positives = 201/373 (53%), Gaps = 13/373 (3%)
 Frame = -1

Query: 1739 RLMLPASPHNYVPNTLSRPLFIYVMDGYHLQQTVVQANAPVSVLNIRTHSPTFANF--FS 1566
            RL +P    ++VPN L  P   YV++  H Q  V Q+N   S+   +   P +A+   F 
Sbjct: 22   RLSVPHLTCSHVPNNLLWPTLGYVLEYTHFQPNVRQSNNCTSIG--KKICPAYASISTFP 79

Query: 1565 RVHSARTLQLSDIVGNS--SQRTLKAQVSASLSWNHTIDEELQVD---FTSGCIDDMDVK 1401
            R+     LQ+SD VG +  S +  ++++    +   T+ EE+Q D   +++  I+D+  K
Sbjct: 80   RIDDFVALQISDDVGETTGSSKHYQSKIPLDPAEKQTMSEEVQPDGCQYSAEIINDLPRK 139

Query: 1400 ADKEIERRKKIGVANKGKAPWNKGRKHSAETRELIKQRTIEALKDPKVRKKMSEGHRPHS 1221
              K   R+KK G  NKG+ PWNKGRKH+AETR LIKQRTIEAL +P+VRKKMS   R H+
Sbjct: 140  RRK---RKKKHG--NKGRIPWNKGRKHTAETRALIKQRTIEALTNPQVRKKMSGHPRAHN 194

Query: 1220 DVIKAKIGLGQRRVWRKRLKLKSIKEKFYHMWSESIAEAAKKGLFDQQELDWDSYXXXXX 1041
            + I+AKI    R++W KRL+ K ++E F+  W++ IA AAK+G  DQQELDWD Y     
Sbjct: 195  EAIRAKISSSLRQLWGKRLRWKRLRENFFLSWTKRIAIAAKEGSIDQQELDWDGYEKIKK 254

Query: 1040 XXXXXXXXXXXXXEKAKEITKL---LXXXXXXXXXXXXALQKKEKEERAKFEGEVXXXXX 870
                          K +EI K                 A ++KE+EE+A    E      
Sbjct: 255  EITLKQLQGAMEKAKGEEIAKRKVEREKKEKEEKMERVAQKRKEREEKAMEREETKRKAH 314

Query: 869  XXXXXQI---LISKGLKLKARITKIRQKKSIDGQVSVPGDVPTSRQPAIEKLDLEFIKRE 699
                 +     +++ L LK R+TKIR+KK  D Q+   G    S   A EKL+ E  KRE
Sbjct: 315  RQSKKKTEESSVARKLTLKKRLTKIRKKKPTDDQMISQGASSPSLSRAWEKLNAEISKRE 374

Query: 698  KSRKELSLADQIR 660
            K  +E SLADQI+
Sbjct: 375  KVPRETSLADQIQ 387


Top