BLASTX nr result

ID: Coptis21_contig00002824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002824
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322627.1| predicted protein [Populus trichocarpa] gi|2...    78   3e-12
ref|XP_003521143.1| PREDICTED: uncharacterized protein LOC100787...    70   6e-10
ref|XP_002876393.1| hypothetical protein ARALYDRAFT_907164 [Arab...    69   2e-09
ref|XP_003554135.1| PREDICTED: uncharacterized protein LOC100812...    68   3e-09
ref|XP_003625036.1| hypothetical protein MTR_7g090260 [Medicago ...    67   5e-09

>ref|XP_002322627.1| predicted protein [Populus trichocarpa] gi|222867257|gb|EEF04388.1|
           predicted protein [Populus trichocarpa]
          Length = 74

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = +3

Query: 282 MVMPWGMTLWMTKMVWVALCGWISSCLTVAHEISLAIRNGDVGPFHV 422
           M  PW M LWM  MVWVAL GW+SSCLTVA E++ ++R GD+GPFH+
Sbjct: 1   MAFPWSMALWMANMVWVALIGWVSSCLTVADELASSLRTGDIGPFHI 47


>ref|XP_003521143.1| PREDICTED: uncharacterized protein LOC100787011 [Glycine max]
          Length = 48

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +3

Query: 282 MVMPWGMTLWMTKMVWVALCGWISSCLTVAHEISLAIRNGDVGPFHVG 425
           M M     LW+ KM W+AL GWISSCLTVA E + ++R+GD+GPFHVG
Sbjct: 1   MAMALDAALWIVKMTWIALSGWISSCLTVADEFASSLRSGDIGPFHVG 48


>ref|XP_002876393.1| hypothetical protein ARALYDRAFT_907164 [Arabidopsis lyrata subsp.
           lyrata] gi|297322231|gb|EFH52652.1| hypothetical protein
           ARALYDRAFT_907164 [Arabidopsis lyrata subsp. lyrata]
          Length = 83

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 25/51 (49%), Positives = 40/51 (78%)
 Frame = +3

Query: 273 NLDMVMPWGMTLWMTKMVWVALCGWISSCLTVAHEISLAIRNGDVGPFHVG 425
           + +M MP GM +++ +MVW +L GW+ +C+ +A EI+ ++RNGD+GPFHVG
Sbjct: 33  SFEMAMPLGMAMYLMRMVWFSLSGWVFTCVAIADEIAGSLRNGDIGPFHVG 83


>ref|XP_003554135.1| PREDICTED: uncharacterized protein LOC100812895 [Glycine max]
          Length = 48

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +3

Query: 282 MVMPWGMTLWMTKMVWVALCGWISSCLTVAHEISLAIRNGDVGPFHVG 425
           M M     LW+ KM W+AL GWISSCL VA E + ++R+GD+GPFHVG
Sbjct: 1   MAMALDAALWIVKMTWIALSGWISSCLIVADEFASSLRSGDIGPFHVG 48


>ref|XP_003625036.1| hypothetical protein MTR_7g090260 [Medicago truncatula]
           gi|355500051|gb|AES81254.1| hypothetical protein
           MTR_7g090260 [Medicago truncatula]
          Length = 82

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 27/53 (50%), Positives = 38/53 (71%)
 Frame = +3

Query: 282 MVMPWGMTLWMTKMVWVALCGWISSCLTVAHEISLAIRNGDVGPFHVG*SFHQ 440
           M M     L++ KM W+AL GWI+SCLT+A E + ++R+GD+GPFHVG   H+
Sbjct: 1   MAMALNSALYIAKMAWIALSGWITSCLTIADEFATSLRSGDIGPFHVGPPHHK 53


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