BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002810
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278186.1| PREDICTED: 60S ribosomal protein L23a-like [...   209   6e-52
ref|XP_003547452.1| PREDICTED: 60S ribosomal protein L23A-like [...   209   8e-52
sp|O22644.1|RL23A_FRIAG RecName: Full=60S ribosomal protein L23A...   209   8e-52
gb|ABB97038.1| unknown [Brassica rapa]                                208   1e-51
emb|CAA63107.1| ribosomal protein L23 [Spinacia oleracea]             208   1e-51

>ref|XP_002278186.1| PREDICTED: 60S ribosomal protein L23a-like [Vitis vinifera]
          Length = 155

 Score =  209 bits (532), Expect = 6e-52
 Identities = 111/147 (75%), Positives = 113/147 (76%)
 Frame = -3

Query: 763 TKKGDPXXXXXXXXXXXKSGASTLKKKAKKIRTSVTFHRPKTLKKARDPKYPRISATPRN 584
           TKK DP           KSG  T KKKAKKIRTSVTFHRP+TLKK R+PKYPRISA PRN
Sbjct: 9   TKKTDPKAQAQKAAKTVKSGGGTFKKKAKKIRTSVTFHRPRTLKKERNPKYPRISAPPRN 68

Query: 583 KLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXKMYDIQTKKVNTLIR 404
           KLD YQILKYPLTTESAMKKIEDNNTLVF                KMYDIQTKKVNTLIR
Sbjct: 69  KLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAMKKMYDIQTKKVNTLIR 128

Query: 403 PDGTKKAYVRLTPDYDALDVANKIGII 323
           PDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 129 PDGTKKAYVRLTPDYDALDVANKIGII 155


>ref|XP_003547452.1| PREDICTED: 60S ribosomal protein L23A-like [Glycine max]
          Length = 153

 Score =  209 bits (531), Expect = 8e-52
 Identities = 113/146 (77%), Positives = 114/146 (78%)
 Frame = -3

Query: 760 KKGDPXXXXXXXXXXXKSGASTLKKKAKKIRTSVTFHRPKTLKKARDPKYPRISATPRNK 581
           KK DP           KSGA TLKKK KKIRTSVTFHRPKTLKK R+PKYPRISA PRNK
Sbjct: 9   KKADPKAQALKTAKAVKSGA-TLKKKTKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNK 67

Query: 580 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXKMYDIQTKKVNTLIRP 401
           LDHYQILKYPLTTESAMKKIEDNNTLVF                KMYDIQTKKVNTLIRP
Sbjct: 68  LDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQTKKVNTLIRP 127

Query: 400 DGTKKAYVRLTPDYDALDVANKIGII 323
           DGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 128 DGTKKAYVRLTPDYDALDVANKIGII 153


>sp|O22644.1|RL23A_FRIAG RecName: Full=60S ribosomal protein L23A gi|2641201|gb|AAB86852.1|
           ribosomal protein L23a [Fritillaria agrestis]
          Length = 154

 Score =  209 bits (531), Expect = 8e-52
 Identities = 107/129 (82%), Positives = 110/129 (85%)
 Frame = -3

Query: 709 SGASTLKKKAKKIRTSVTFHRPKTLKKARDPKYPRISATPRNKLDHYQILKYPLTTESAM 530
           SG STL+KKAKKIRTSVTFHRPKTLKK R+PKYPRISA PRNKLDHYQILKYPLTTESAM
Sbjct: 26  SGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAM 85

Query: 529 KKIEDNNTLVFXXXXXXXXXXXXXXXXKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDAL 350
           KKIEDNNTLVF                KMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDAL
Sbjct: 86  KKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDAL 145

Query: 349 DVANKIGII 323
           D+ANKIGII
Sbjct: 146 DIANKIGII 154


>gb|ABB97038.1| unknown [Brassica rapa]
          Length = 154

 Score =  208 bits (529), Expect = 1e-51
 Identities = 112/147 (76%), Positives = 113/147 (76%)
 Frame = -3

Query: 763 TKKGDPXXXXXXXXXXXKSGASTLKKKAKKIRTSVTFHRPKTLKKARDPKYPRISATPRN 584
           TKK DP           KSG   +KKKAKKIRT VTFHRPKTL KARDPKYPRISATPRN
Sbjct: 9   TKKADPKAKALKAAKAVKSG-QVIKKKAKKIRTKVTFHRPKTLTKARDPKYPRISATPRN 67

Query: 583 KLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXKMYDIQTKKVNTLIR 404
           KLDHY ILKYPLTTESAMKKIEDNNTLVF                KMYDIQTKKVNTLIR
Sbjct: 68  KLDHYGILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIR 127

Query: 403 PDGTKKAYVRLTPDYDALDVANKIGII 323
           PDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 128 PDGTKKAYVRLTPDYDALDVANKIGII 154


>emb|CAA63107.1| ribosomal protein L23 [Spinacia oleracea]
          Length = 155

 Score =  208 bits (529), Expect = 1e-51
 Identities = 112/147 (76%), Positives = 114/147 (77%), Gaps = 1/147 (0%)
 Frame = -3

Query: 760 KKGDPXXXXXXXXXXXKSGASTLKKKA-KKIRTSVTFHRPKTLKKARDPKYPRISATPRN 584
           KK DP           KSGASTLKKKA KKIRT VTFHRPKT KK R+PKYPRISATPRN
Sbjct: 9   KKADPKAQALKAAKAVKSGASTLKKKASKKIRTKVTFHRPKTFKKERNPKYPRISATPRN 68

Query: 583 KLDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXKMYDIQTKKVNTLIR 404
           KLDHYQILK+PLTTESAMKKIEDNNTLVF                KMYDIQ KKVNTLIR
Sbjct: 69  KLDHYQILKFPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQAKKVNTLIR 128

Query: 403 PDGTKKAYVRLTPDYDALDVANKIGII 323
           PDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 129 PDGTKKAYVRLTPDYDALDVANKIGII 155