BLASTX nr result

ID: Coptis21_contig00002806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002806
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosph...   268   9e-70
ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|2...   256   3e-66
tpg|DAA55957.1| TPA: hypothetical protein ZEAMMB73_316859 [Zea m...   256   4e-66
tpg|DAA55956.1| TPA: hypothetical protein ZEAMMB73_316859 [Zea m...   256   4e-66
ref|XP_003565020.1| PREDICTED: mitochondrial thiamine pyrophosph...   254   1e-65

>ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier [Vitis
           vinifera] gi|297736865|emb|CBI26066.3| unnamed protein
           product [Vitis vinifera]
          Length = 330

 Score =  268 bits (685), Expect = 9e-70
 Identities = 132/147 (89%), Positives = 139/147 (94%)
 Frame = +3

Query: 294 MEEPGQLKRTFIDTSAGAIAGGISRTVTSPLDVIKIRFQVQLEPTSSWPLLRKDVYGPSK 473
           MEEPGQLKR FID +AGAIAGGISRTVTSPLDVIKIRFQVQLEPT+SW LLR+DV+G SK
Sbjct: 1   MEEPGQLKRAFIDAAAGAIAGGISRTVTSPLDVIKIRFQVQLEPTTSWALLRRDVHGQSK 60

Query: 474 YTGMGQATKDIFREEGLKGFWRGNVPALLMVMPYTAIQFAVLHKLKAFASGSSKSEDHIH 653
           YTGM QATKDIFREEGL GFWRGNVPALLMVMPYTAIQF VLHKLK FA+GSSKSEDHIH
Sbjct: 61  YTGMLQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFTVLHKLKTFAAGSSKSEDHIH 120

Query: 654 LSPYLSYLSGALAGCAATVGSYPFDLL 734
           LSPYLS++SGALAGCAATVGSYPFDLL
Sbjct: 121 LSPYLSFVSGALAGCAATVGSYPFDLL 147


>ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|222871571|gb|EEF08702.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  256 bits (654), Expect = 3e-66
 Identities = 126/146 (86%), Positives = 134/146 (91%)
 Frame = +3

Query: 297 EEPGQLKRTFIDTSAGAIAGGISRTVTSPLDVIKIRFQVQLEPTSSWPLLRKDVYGPSKY 476
           E PGQLKR  ID +AGAIAGGISRTVTSPLDVIKIRFQVQLEPT SW L+R+++  PSKY
Sbjct: 1   EAPGQLKRALIDATAGAIAGGISRTVTSPLDVIKIRFQVQLEPTYSWDLVRRNMTAPSKY 60

Query: 477 TGMGQATKDIFREEGLKGFWRGNVPALLMVMPYTAIQFAVLHKLKAFASGSSKSEDHIHL 656
           TGM QATKDIFREEGL GFWRGNVPALLMVMPYTAIQFAVLHKLK FA+GSSK+EDHIHL
Sbjct: 61  TGMLQATKDIFREEGLPGFWRGNVPALLMVMPYTAIQFAVLHKLKTFAAGSSKTEDHIHL 120

Query: 657 SPYLSYLSGALAGCAATVGSYPFDLL 734
           SPYLSY+SGALAGC ATVGSYPFDLL
Sbjct: 121 SPYLSYISGALAGCTATVGSYPFDLL 146


>tpg|DAA55957.1| TPA: hypothetical protein ZEAMMB73_316859 [Zea mays]
          Length = 336

 Score =  256 bits (653), Expect = 4e-66
 Identities = 121/146 (82%), Positives = 135/146 (92%)
 Frame = +3

Query: 297 EEPGQLKRTFIDTSAGAIAGGISRTVTSPLDVIKIRFQVQLEPTSSWPLLRKDVYGPSKY 476
           EEP Q++R  +D+ AGAI+GGISRTVTSPLDVIKIRFQVQLEPT+SW +LR+D+YGPSKY
Sbjct: 5   EEPSQMRRALVDSLAGAISGGISRTVTSPLDVIKIRFQVQLEPTTSWGILRRDIYGPSKY 64

Query: 477 TGMGQATKDIFREEGLKGFWRGNVPALLMVMPYTAIQFAVLHKLKAFASGSSKSEDHIHL 656
           TG+ QATKDI REEGL GFWRGNVPALLM MPYTAIQF VLHKLK FASGSSK+EDH+HL
Sbjct: 65  TGLLQATKDILREEGLPGFWRGNVPALLMYMPYTAIQFTVLHKLKTFASGSSKTEDHLHL 124

Query: 657 SPYLSYLSGALAGCAATVGSYPFDLL 734
           SPYLSY+SGALAGCAAT+GSYPFDLL
Sbjct: 125 SPYLSYVSGALAGCAATIGSYPFDLL 150


>tpg|DAA55956.1| TPA: hypothetical protein ZEAMMB73_316859 [Zea mays]
          Length = 334

 Score =  256 bits (653), Expect = 4e-66
 Identities = 121/146 (82%), Positives = 135/146 (92%)
 Frame = +3

Query: 297 EEPGQLKRTFIDTSAGAIAGGISRTVTSPLDVIKIRFQVQLEPTSSWPLLRKDVYGPSKY 476
           EEP Q++R  +D+ AGAI+GGISRTVTSPLDVIKIRFQVQLEPT+SW +LR+D+YGPSKY
Sbjct: 5   EEPSQMRRALVDSLAGAISGGISRTVTSPLDVIKIRFQVQLEPTTSWGILRRDIYGPSKY 64

Query: 477 TGMGQATKDIFREEGLKGFWRGNVPALLMVMPYTAIQFAVLHKLKAFASGSSKSEDHIHL 656
           TG+ QATKDI REEGL GFWRGNVPALLM MPYTAIQF VLHKLK FASGSSK+EDH+HL
Sbjct: 65  TGLLQATKDILREEGLPGFWRGNVPALLMYMPYTAIQFTVLHKLKTFASGSSKTEDHLHL 124

Query: 657 SPYLSYLSGALAGCAATVGSYPFDLL 734
           SPYLSY+SGALAGCAAT+GSYPFDLL
Sbjct: 125 SPYLSYVSGALAGCAATIGSYPFDLL 150


>ref|XP_003565020.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like
           [Brachypodium distachyon]
          Length = 332

 Score =  254 bits (650), Expect = 1e-65
 Identities = 122/146 (83%), Positives = 133/146 (91%)
 Frame = +3

Query: 297 EEPGQLKRTFIDTSAGAIAGGISRTVTSPLDVIKIRFQVQLEPTSSWPLLRKDVYGPSKY 476
           EEP Q++R  +DT AGAI+GGISRTVTSPLDVIKIRFQVQLEPT+SW  LR+DVYGPSKY
Sbjct: 5   EEPSQMRRAMVDTLAGAISGGISRTVTSPLDVIKIRFQVQLEPTASWGALRRDVYGPSKY 64

Query: 477 TGMGQATKDIFREEGLKGFWRGNVPALLMVMPYTAIQFAVLHKLKAFASGSSKSEDHIHL 656
           TG+ QATKDI REEGL GFWRGNVPAL M MPYTAIQF VLHKLK FASGSS++EDH+HL
Sbjct: 65  TGLMQATKDILREEGLPGFWRGNVPALFMYMPYTAIQFTVLHKLKTFASGSSRTEDHLHL 124

Query: 657 SPYLSYLSGALAGCAATVGSYPFDLL 734
           SPYLSY+SGALAGCAATVGSYPFDLL
Sbjct: 125 SPYLSYVSGALAGCAATVGSYPFDLL 150


Top