BLASTX nr result

ID: Coptis21_contig00002793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002793
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT76903.1| IAA type protein [Elaeis guineensis]                   244   2e-62
ref|XP_002517529.1| Auxin-responsive protein IAA1, putative [Ric...   236   1e-59
gb|ABG81096.1| AUX/IAA-like protein [Pelargonium x hortorum]          234   3e-59
ref|XP_002280524.2| PREDICTED: auxin-responsive protein IAA17-li...   233   5e-59
emb|CBI36192.3| unnamed protein product [Vitis vinifera]              233   5e-59

>gb|AAT76903.1| IAA type protein [Elaeis guineensis]
          Length = 211

 Score =  244 bits (624), Expect = 2e-62
 Identities = 123/182 (67%), Positives = 142/182 (78%), Gaps = 3/182 (1%)
 Frame = +2

Query: 77  ETELTLGLPGDTRIIHEGKSSVKRGFSQTVDLKLGHKEPTDDHSDTEVTSVGNF---PPA 247
           ETEL LGLPG +R     ++  KRGF++TVDL LG +  + D  D      G+    PPA
Sbjct: 21  ETELKLGLPGGSRTAGS-ETEKKRGFAETVDLSLGAESRSGDLGDRSTGDFGSGAGKPPA 79

Query: 248 PKTQVVGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTC 427
            K QVVGWPPVRS R+N   K CTYVKVAVDGAPYLRKVDLEM+GGY Q L+A+E+MF+C
Sbjct: 80  VKAQVVGWPPVRSFRKNA-LKSCTYVKVAVDGAPYLRKVDLEMYGGYQQFLTAIEDMFSC 138

Query: 428 FTIRNYVNESKLMDPVNGTEYVPTYEDKDGDWMLVGDVPWKMFIESCKRLRLMKSSEAVG 607
           FT+RN  NE +L+DPVNGTEYVPTYEDKDGDWMLVGDVPWKMF+ SCKRLRLMKSSEA+ 
Sbjct: 139 FTVRNCPNERRLVDPVNGTEYVPTYEDKDGDWMLVGDVPWKMFVASCKRLRLMKSSEAIN 198

Query: 608 LA 613
           LA
Sbjct: 199 LA 200


>ref|XP_002517529.1| Auxin-responsive protein IAA1, putative [Ricinus communis]
           gi|223543161|gb|EEF44693.1| Auxin-responsive protein
           IAA1, putative [Ricinus communis]
          Length = 217

 Score =  236 bits (601), Expect = 1e-59
 Identities = 120/186 (64%), Positives = 139/186 (74%), Gaps = 7/186 (3%)
 Frame = +2

Query: 77  ETELTLGLPGDTRIIHEG--KSSVKRGFSQTVDLKLGHKEPTDDHSD-----TEVTSVGN 235
           ETELTL LPG++R+  +   K   KRG+ QTVDL LG       + D      +V+S   
Sbjct: 21  ETELTLALPGESRVSADNGAKIGTKRGYLQTVDLNLGSCSSDCGNKDCNMPENDVSSAPK 80

Query: 236 FPPAPKTQVVGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEE 415
            PP  K QVVGWPPVR+ R+N   K   +VKVAVDGAPYLRKVDLEM+  Y QLL+ALE+
Sbjct: 81  KPPVSKAQVVGWPPVRAYRKNA-MKSSKFVKVAVDGAPYLRKVDLEMYNSYQQLLTALED 139

Query: 416 MFTCFTIRNYVNESKLMDPVNGTEYVPTYEDKDGDWMLVGDVPWKMFIESCKRLRLMKSS 595
           MF+CFTIRNY+NE K+MD VNG EYVPTYEDKDGDWM+VGDVPW MF+ESCKRLRLMKSS
Sbjct: 140 MFSCFTIRNYLNERKIMDQVNGVEYVPTYEDKDGDWMMVGDVPWTMFVESCKRLRLMKSS 199

Query: 596 EAVGLA 613
           EA GLA
Sbjct: 200 EATGLA 205


>gb|ABG81096.1| AUX/IAA-like protein [Pelargonium x hortorum]
          Length = 192

 Score =  234 bits (597), Expect = 3e-59
 Identities = 116/179 (64%), Positives = 138/179 (77%)
 Frame = +2

Query: 77  ETELTLGLPGDTRIIHEGKSSVKRGFSQTVDLKLGHKEPTDDHSDTEVTSVGNFPPAPKT 256
           +TELTLGLPGD+R         KRGFS+ +D+         D + T ++     PP  KT
Sbjct: 21  DTELTLGLPGDSR-------GTKRGFSEAIDI---------DKTKTSISGSAKSPP--KT 62

Query: 257 QVVGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTCFTI 436
           QVVGWPPV+++R+++  + C YVKVAVDGAPYLRKVDLEM+G Y QLL ALEE+F+C TI
Sbjct: 63  QVVGWPPVKASRKSVVARNCKYVKVAVDGAPYLRKVDLEMYGSYQQLLEALEELFSCLTI 122

Query: 437 RNYVNESKLMDPVNGTEYVPTYEDKDGDWMLVGDVPWKMFIESCKRLRLMKSSEAVGLA 613
           RN +NE KLMD VNG EYVPTYEDKDGDWMLVGDVPWKMF+ESCKR+RLMKSS+AVGLA
Sbjct: 123 RNCLNERKLMDLVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSDAVGLA 181


>ref|XP_002280524.2| PREDICTED: auxin-responsive protein IAA17-like [Vitis vinifera]
          Length = 210

 Score =  233 bits (595), Expect = 5e-59
 Identities = 119/181 (65%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
 Frame = +2

Query: 77  ETELTLGLPGDTRIIHEGKSSVKRGFSQTVDLKLGHKEPTDDHSDTEVTSVG--NFPPAP 250
           +TELTLGLPG T      KS  KRGFS TV L L     TD  S+     V   + PP  
Sbjct: 21  DTELTLGLPGAT------KSGTKRGFSDTVGLNLRGPCNTDHASNPSENDVSGDSKPPPA 74

Query: 251 KTQVVGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTCF 430
           KTQ+VGWPPV+++R+N+  K   YVKVAVDGAPYLRKVDLEM+G Y QLL +LE+MF+CF
Sbjct: 75  KTQIVGWPPVKASRKNVA-KISKYVKVAVDGAPYLRKVDLEMYGSYQQLLGSLEDMFSCF 133

Query: 431 TIRNYVNESKLMDPVNGTEYVPTYEDKDGDWMLVGDVPWKMFIESCKRLRLMKSSEAVGL 610
            IRNY+NE KLMDPV G++Y+PTYED+DGDWMLVGDVPWKMF+ESCKRLRLMKS EA+GL
Sbjct: 134 PIRNYLNERKLMDPVKGSDYMPTYEDRDGDWMLVGDVPWKMFVESCKRLRLMKSIEAIGL 193

Query: 611 A 613
           A
Sbjct: 194 A 194


>emb|CBI36192.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  233 bits (595), Expect = 5e-59
 Identities = 119/181 (65%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
 Frame = +2

Query: 77  ETELTLGLPGDTRIIHEGKSSVKRGFSQTVDLKLGHKEPTDDHSDTEVTSVG--NFPPAP 250
           +TELTLGLPG T      KS  KRGFS TV L L     TD  S+     V   + PP  
Sbjct: 105 DTELTLGLPGAT------KSGTKRGFSDTVGLNLRGPCNTDHASNPSENDVSGDSKPPPA 158

Query: 251 KTQVVGWPPVRSTRRNLPRKKCTYVKVAVDGAPYLRKVDLEMHGGYTQLLSALEEMFTCF 430
           KTQ+VGWPPV+++R+N+  K   YVKVAVDGAPYLRKVDLEM+G Y QLL +LE+MF+CF
Sbjct: 159 KTQIVGWPPVKASRKNVA-KISKYVKVAVDGAPYLRKVDLEMYGSYQQLLGSLEDMFSCF 217

Query: 431 TIRNYVNESKLMDPVNGTEYVPTYEDKDGDWMLVGDVPWKMFIESCKRLRLMKSSEAVGL 610
            IRNY+NE KLMDPV G++Y+PTYED+DGDWMLVGDVPWKMF+ESCKRLRLMKS EA+GL
Sbjct: 218 PIRNYLNERKLMDPVKGSDYMPTYEDRDGDWMLVGDVPWKMFVESCKRLRLMKSIEAIGL 277

Query: 611 A 613
           A
Sbjct: 278 A 278


Top