BLASTX nr result

ID: Coptis21_contig00002765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002765
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23666.3| unnamed protein product [Vitis vinifera]              244   2e-62
emb|CBI25584.3| unnamed protein product [Vitis vinifera]              243   3e-62
ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like ...   239   4e-61
ref|XP_002307658.1| predicted protein [Populus trichocarpa] gi|1...   239   4e-61
ref|XP_002267370.1| PREDICTED: 60S ribosomal protein L14-2-like ...   239   6e-61

>emb|CBI23666.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  244 bits (622), Expect = 2e-62
 Identities = 122/144 (84%), Positives = 131/144 (90%)
 Frame = -2

Query: 763 PLSLSTRRSSKMPFKRYVEIGRVALVNYGKDYGRLVVIVDVLDQNRALVDAPDMVRSQMN 584
           PL   +R  + MPFKRYVE+GRVALVNYGKDYGRLVVIVDV+DQNRALVDAPDMVR QMN
Sbjct: 76  PLPAVSRALANMPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRCQMN 135

Query: 583 FKRLSLTDIKIDIGRVPKKKSLIEAMEAGDVKNKWEKSSWGRKLIVQKRRASLNDFDRFK 404
           FKRLSLTDIKIDI RVPKKK+LIEAM A DVKNKWE SSWGRKLIVQKRRASLNDFDRFK
Sbjct: 136 FKRLSLTDIKIDIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLIVQKRRASLNDFDRFK 195

Query: 403 LMVAKIKKAGAVRQELAKLKKQTA 332
           +M+AKIK+ G +RQELAKLKKQTA
Sbjct: 196 IMLAKIKRGGVIRQELAKLKKQTA 219


>emb|CBI25584.3| unnamed protein product [Vitis vinifera]
          Length = 179

 Score =  243 bits (620), Expect = 3e-62
 Identities = 122/143 (85%), Positives = 131/143 (91%)
 Frame = -2

Query: 760 LSLSTRRSSKMPFKRYVEIGRVALVNYGKDYGRLVVIVDVLDQNRALVDAPDMVRSQMNF 581
           LS  +   +KMPFKRYVEIGRVALVNYGK+YGRLVVIVDV+DQNRALVDAPDMVR QMNF
Sbjct: 36  LSALSHAQAKMPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRCQMNF 95

Query: 580 KRLSLTDIKIDIGRVPKKKSLIEAMEAGDVKNKWEKSSWGRKLIVQKRRASLNDFDRFKL 401
           KRLSLTDIKIDI RVPKKK+LIEAM A DVKNKWE SSWGRKLIVQKRRASLNDFDRFK+
Sbjct: 96  KRLSLTDIKIDIKRVPKKKTLIEAMNAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKI 155

Query: 400 MVAKIKKAGAVRQELAKLKKQTA 332
           M+AKIK+ G +RQELAKLKKQTA
Sbjct: 156 MLAKIKRGGVIRQELAKLKKQTA 178


>ref|XP_002285313.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera]
          Length = 134

 Score =  239 bits (611), Expect = 4e-61
 Identities = 119/133 (89%), Positives = 126/133 (94%)
 Frame = -2

Query: 730 MPFKRYVEIGRVALVNYGKDYGRLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKI 551
           MPFKRYVE+GRVALVNYGKDYGRLVVIVDV+DQNRALVDAPDMVR QMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEVGRVALVNYGKDYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDIKI 60

Query: 550 DIGRVPKKKSLIEAMEAGDVKNKWEKSSWGRKLIVQKRRASLNDFDRFKLMVAKIKKAGA 371
           DI RVPKKK+LIEAM A DVKNKWE SSWGRKLIVQKRRASLNDFDRFK+M+AKIK+ G 
Sbjct: 61  DIKRVPKKKTLIEAMTAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGV 120

Query: 370 VRQELAKLKKQTA 332
           +RQELAKLKKQTA
Sbjct: 121 IRQELAKLKKQTA 133


>ref|XP_002307658.1| predicted protein [Populus trichocarpa] gi|118485504|gb|ABK94606.1|
           unknown [Populus trichocarpa]
           gi|222857107|gb|EEE94654.1| predicted protein [Populus
           trichocarpa]
          Length = 133

 Score =  239 bits (611), Expect = 4e-61
 Identities = 120/133 (90%), Positives = 127/133 (95%)
 Frame = -2

Query: 730 MPFKRYVEIGRVALVNYGKDYGRLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKI 551
           MPFKRYVEIGRVALVNYGKDYG+LVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGKDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 550 DIGRVPKKKSLIEAMEAGDVKNKWEKSSWGRKLIVQKRRASLNDFDRFKLMVAKIKKAGA 371
           +I RVPKKK+LIEAME  DVKNKWE SSWGR+L VQKRRASLNDFDRFKLM+AKIKKAG 
Sbjct: 61  EINRVPKKKALIEAMEKADVKNKWENSSWGRRLTVQKRRASLNDFDRFKLMLAKIKKAGI 120

Query: 370 VRQELAKLKKQTA 332
           VRQELAKLKK+TA
Sbjct: 121 VRQELAKLKKETA 133


>ref|XP_002267370.1| PREDICTED: 60S ribosomal protein L14-2-like [Vitis vinifera]
          Length = 134

 Score =  239 bits (609), Expect = 6e-61
 Identities = 119/133 (89%), Positives = 126/133 (94%)
 Frame = -2

Query: 730 MPFKRYVEIGRVALVNYGKDYGRLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKI 551
           MPFKRYVEIGRVALVNYGK+YGRLVVIVDV+DQNRALVDAPDMVR QMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGKEYGRLVVIVDVIDQNRALVDAPDMVRCQMNFKRLSLTDIKI 60

Query: 550 DIGRVPKKKSLIEAMEAGDVKNKWEKSSWGRKLIVQKRRASLNDFDRFKLMVAKIKKAGA 371
           DI RVPKKK+LIEAM A DVKNKWE SSWGRKLIVQKRRASLNDFDRFK+M+AKIK+ G 
Sbjct: 61  DIKRVPKKKTLIEAMNAADVKNKWENSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRGGV 120

Query: 370 VRQELAKLKKQTA 332
           +RQELAKLKKQTA
Sbjct: 121 IRQELAKLKKQTA 133


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