BLASTX nr result

ID: Coptis21_contig00002763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002763
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32643.3| unnamed protein product [Vitis vinifera]              160   7e-37
ref|XP_002525212.1| conserved hypothetical protein [Ricinus comm...   151   3e-34
ref|XP_002309441.1| predicted protein [Populus trichocarpa] gi|2...   144   5e-32
ref|XP_004142098.1| PREDICTED: uncharacterized protein LOC101220...   142   2e-31
ref|XP_003564555.1| PREDICTED: uncharacterized protein LOC100832...   130   6e-28

>emb|CBI32643.3| unnamed protein product [Vitis vinifera]
          Length = 1400

 Score =  160 bits (405), Expect = 7e-37
 Identities = 79/135 (58%), Positives = 99/135 (73%)
 Frame = +3

Query: 372 VSG*MESTCETLECGSPLANVYEIPGEPAIVIDGVPNVDSSSHFQPHTVTANDAQSKRDP 551
           + G ME+  +  E  +    V+EI GEPAIVI+GVP+V S+     H  T +D  S ++ 
Sbjct: 5   LGGTMENQSKEQEFETLPTGVFEISGEPAIVINGVPDVSSNDGSLVHCDTISDTGSHQET 64

Query: 552 GFGEWLEGRVVEKSFGEQLYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLDV 731
            FGEWLEGR V K FG Q YSG VT+F++E  WYRVVYEDGDFEDLEWHELEE+LVPLDV
Sbjct: 65  VFGEWLEGREVRKLFGGQYYSGVVTQFDKEAGWYRVVYEDGDFEDLEWHELEEVLVPLDV 124

Query: 732 AIPLKTLALKRLRKN 776
           ++PLK+LA+K +RKN
Sbjct: 125 SVPLKSLAMKIIRKN 139


>ref|XP_002525212.1| conserved hypothetical protein [Ricinus communis]
           gi|223535509|gb|EEF37178.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  151 bits (382), Expect = 3e-34
 Identities = 79/141 (56%), Positives = 103/141 (73%), Gaps = 10/141 (7%)
 Frame = +3

Query: 399 ETLECGSPLANVYEIPGEPAIVIDGVPNVDSSSHFQPHTVTANDAQSKRDPG-------- 554
           E+L+ G     V E+PGEPAIVI+GVP+++ S      + TAND +S+R+          
Sbjct: 11  ESLQTG-----VLELPGEPAIVINGVPDINKSDGSLVVSSTANDTESQRNTSPDTEILGN 65

Query: 555 --FGEWLEGRVVEKSFGEQLYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLD 728
             FGEWLEGR V+K FGE++Y+G VT+F++ET WYRVVYEDGDFEDLEW ELE  LVPLD
Sbjct: 66  ASFGEWLEGREVQKWFGEKMYTGTVTEFDKETGWYRVVYEDGDFEDLEWQELEGFLVPLD 125

Query: 729 VAIPLKTLALKRLRKNAQKSS 791
           + IPLK+LALK ++K +QKS+
Sbjct: 126 ITIPLKSLALKIIKK-SQKST 145


>ref|XP_002309441.1| predicted protein [Populus trichocarpa] gi|222855417|gb|EEE92964.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  144 bits (363), Expect = 5e-32
 Identities = 70/135 (51%), Positives = 96/135 (71%), Gaps = 4/135 (2%)
 Frame = +3

Query: 384 MESTCETLECGSPLANVYEIPGEPAIVIDGVPNVDSSSHFQPHT----VTANDAQSKRDP 551
           M++T + LE  S    V+E+PGEPAIVI+GVP++  S      +    +T+ +A   RD 
Sbjct: 1   MDNTSKELELESLPTGVFELPGEPAIVINGVPDISPSDAALVLSSTCGITSQNADFFRDS 60

Query: 552 GFGEWLEGRVVEKSFGEQLYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLDV 731
            FGEWLEGR V K FGE  +SG V+ F++ET WYRVVYEDGD E+L+W EL+E+L+PLD+
Sbjct: 61  SFGEWLEGREVRKLFGESYFSGTVSLFDKETGWYRVVYEDGDSEELDWKELQEVLLPLDI 120

Query: 732 AIPLKTLALKRLRKN 776
            +PLK+LA K ++KN
Sbjct: 121 TVPLKSLAQKIIKKN 135


>ref|XP_004142098.1| PREDICTED: uncharacterized protein LOC101220913 isoform 1 [Cucumis
           sativus] gi|449448691|ref|XP_004142099.1| PREDICTED:
           uncharacterized protein LOC101220913 isoform 2 [Cucumis
           sativus] gi|449502593|ref|XP_004161687.1| PREDICTED:
           uncharacterized LOC101220913 isoform 1 [Cucumis sativus]
           gi|449502597|ref|XP_004161688.1| PREDICTED:
           uncharacterized LOC101220913 isoform 2 [Cucumis sativus]
          Length = 172

 Score =  142 bits (357), Expect = 2e-31
 Identities = 70/143 (48%), Positives = 99/143 (69%), Gaps = 2/143 (1%)
 Frame = +3

Query: 426 ANVYEIPGEPAIVIDGVPNVDSSSHFQPHTVTANDAQSKRDPGFGEWLEGRVVEKSFGEQ 605
           +NVYE+PGEPAIVI+GVP++ +  +        +D + +   GFGEWLEGRVV K F ++
Sbjct: 15  SNVYELPGEPAIVINGVPDIPACDNALALCNPLDDEKLRGSTGFGEWLEGRVVNKLFVDR 74

Query: 606 LYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLDVAIPLKTLALKRLRKN--A 779
            Y G + +F++ T WYRV YEDGDFEDL+WH LE++L+P+D+ IPLK LALK L+++  A
Sbjct: 75  YYYGVIIEFDKVTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITIPLKALALKTLKRSRKA 134

Query: 780 QKSSGNHPTSRRLHRPADVKRRR 848
           QK+  N  T      P +++ RR
Sbjct: 135 QKNRKN-KTGNGRGDPKEMEGRR 156


>ref|XP_003564555.1| PREDICTED: uncharacterized protein LOC100832846 [Brachypodium
           distachyon]
          Length = 246

 Score =  130 bits (328), Expect = 6e-28
 Identities = 67/152 (44%), Positives = 96/152 (63%)
 Frame = +3

Query: 417 SPLANVYEIPGEPAIVIDGVPNVDSSSHFQPHTVTANDAQSKRDPGFGEWLEGRVVEKSF 596
           S  A+V ++  EPAI+I+GVP++ S           +   S+ DP FGEWLEGR V+K F
Sbjct: 10  SETASVVKVSREPAIIINGVPDLPSDCTSGLQLAVRDAPGSQVDPRFGEWLEGRKVKKRF 69

Query: 597 GEQLYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLDVAIPLKTLALKRLRKN 776
           G++ Y G V K++ E+ WY VVYEDGD EDLEW ELEE+L+PLD++IPLKTL + +  K 
Sbjct: 70  GDKYYVGNVVKYDSESNWYNVVYEDGDREDLEWQELEEVLLPLDISIPLKTLVMDKC-KL 128

Query: 777 AQKSSGNHPTSRRLHRPADVKRRRANQ*FKVI 872
             + SG  P + +  +   ++  + N+   VI
Sbjct: 129 QSRVSGYRPKASKPKKVYAIREAKRNKKSDVI 160


Top