BLASTX nr result

ID: Coptis21_contig00002762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002762
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236537.1| uncharacterized protein LOC100500082 [Glycin...   226   6e-57
ref|XP_002523210.1| elongation factor 1-beta, putative [Ricinus ...   226   8e-57
ref|XP_003545453.1| PREDICTED: elongation factor 1-beta 1-like [...   223   7e-56
gb|ACU23742.1| unknown [Glycine max]                                  221   2e-55
gb|AEO32729.1| hypothetical protein [Amblyomma maculatum]             216   8e-54

>ref|NP_001236537.1| uncharacterized protein LOC100500082 [Glycine max]
           gi|255629025|gb|ACU14857.1| unknown [Glycine max]
          Length = 223

 Score =  226 bits (577), Expect = 6e-57
 Identities = 128/224 (57%), Positives = 139/224 (62%)
 Frame = -1

Query: 977 VTFADLYTEAGVKCLDEYLAGKTYISGDQLTKDDIKVYAAVPVKPDASLSNATAWYETVS 798
           VTF+DL+TE G+K LD++L+GKTYISGDQLTKDDIKVYAAV  KP  +  NA  WY+ VS
Sbjct: 3   VTFSDLHTEEGIKSLDQFLSGKTYISGDQLTKDDIKVYAAVVEKPGDTFPNAAKWYDAVS 62

Query: 797 SALSKSFPGKALGVSVAVKAEPDEQVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 618
           S L+ SFPG A GV  +  A P E  P                                 
Sbjct: 63  SQLAPSFPGHAQGVRFSGAAAPAEAAPAKAAATAEEDDDDLDLFGDETEEDKKAAEEREA 122

Query: 617 XXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEETVRSIEMPGLLWGASKLVAVGYGI 438
                            VLLDVKPWDDETDMKKLEETVRSIEMPGLLWGASKLV VGYGI
Sbjct: 123 AKKPAKKKESGKSS---VLLDVKPWDDETDMKKLEETVRSIEMPGLLWGASKLVPVGYGI 179

Query: 437 KKLQIMMTIXXXXXXXXXXVEERLTVEPANEFIQSCDIVAFNKI 306
           KKLQIMMTI          VEERLTVEP NE+IQSCDIVAFNKI
Sbjct: 180 KKLQIMMTIVDDLVSVDTLVEERLTVEPCNEYIQSCDIVAFNKI 223


>ref|XP_002523210.1| elongation factor 1-beta, putative [Ricinus communis]
           gi|223537506|gb|EEF39131.1| elongation factor 1-beta,
           putative [Ricinus communis]
          Length = 226

 Score =  226 bits (576), Expect = 8e-57
 Identities = 127/224 (56%), Positives = 141/224 (62%)
 Frame = -1

Query: 977 VTFADLYTEAGVKCLDEYLAGKTYISGDQLTKDDIKVYAAVPVKPDASLSNATAWYETVS 798
           VTF+DL+TE+G+K LDE+LAGK+YISGDQLTKDDIKVYAAV  KP AS  NA+ WYE+VS
Sbjct: 3   VTFSDLHTESGLKSLDEFLAGKSYISGDQLTKDDIKVYAAVLEKPGASFPNASKWYESVS 62

Query: 797 SALSKSFPGKALGVSVAVKAEPDEQVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 618
           S L+ SFPGKA+GV V  K                                         
Sbjct: 63  SHLATSFPGKAVGVRVGGKVAAAPAEAAAPAKEAAAAGDDDDDLDLFGDETEEDKKAAEE 122

Query: 617 XXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEETVRSIEMPGLLWGASKLVAVGYGI 438
                           SVL+DVKPWDDETDMKKLEE VRSIEMPGLLWGASKLV VGYGI
Sbjct: 123 REAAKKSAKKKESGKSSVLMDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGI 182

Query: 437 KKLQIMMTIXXXXXXXXXXVEERLTVEPANEFIQSCDIVAFNKI 306
           KKLQIMMTI          +EE LTVEP NE++QSCDIVAFNKI
Sbjct: 183 KKLQIMMTIVDDLVSVDSLIEEYLTVEPYNEYVQSCDIVAFNKI 226


>ref|XP_003545453.1| PREDICTED: elongation factor 1-beta 1-like [Glycine max]
          Length = 223

 Score =  223 bits (568), Expect = 7e-56
 Identities = 127/224 (56%), Positives = 137/224 (61%)
 Frame = -1

Query: 977 VTFADLYTEAGVKCLDEYLAGKTYISGDQLTKDDIKVYAAVPVKPDASLSNATAWYETVS 798
           VTF+D +TE G+K LD++L+GKTYISGDQLTKDDIKVYAAV  KP  S  NA  WY+ VS
Sbjct: 3   VTFSDPHTEEGIKSLDQFLSGKTYISGDQLTKDDIKVYAAVVEKPGDSFPNAAKWYDAVS 62

Query: 797 SALSKSFPGKALGVSVAVKAEPDEQVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 618
           S L+ SFPG A GV  +  A P E  P                                 
Sbjct: 63  SQLAPSFPGHAQGVRFSGAAAPAEAAPAKAAATAEEDDDDLDLFGDETEEDKKAAEEREA 122

Query: 617 XXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEETVRSIEMPGLLWGASKLVAVGYGI 438
                            VLLDVKPWDDETDMKKLEE VRSIEMPGLLWGASKLV VGYGI
Sbjct: 123 AKKPAKKKESGKSS---VLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGI 179

Query: 437 KKLQIMMTIXXXXXXXXXXVEERLTVEPANEFIQSCDIVAFNKI 306
           KKLQIMMTI          VEERLTVEP NE+IQSCDIVAFNKI
Sbjct: 180 KKLQIMMTIVDDLVSVDTLVEERLTVEPCNEYIQSCDIVAFNKI 223


>gb|ACU23742.1| unknown [Glycine max]
          Length = 223

 Score =  221 bits (564), Expect = 2e-55
 Identities = 126/224 (56%), Positives = 137/224 (61%)
 Frame = -1

Query: 977 VTFADLYTEAGVKCLDEYLAGKTYISGDQLTKDDIKVYAAVPVKPDASLSNATAWYETVS 798
           VTF+D +TE G+K LD++L+GKTYISGDQLTKDDIKVYAAV  KP  S  NA  WY+ VS
Sbjct: 3   VTFSDPHTEEGIKSLDQFLSGKTYISGDQLTKDDIKVYAAVVEKPGDSFPNAAKWYDAVS 62

Query: 797 SALSKSFPGKALGVSVAVKAEPDEQVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 618
           S L+ SFPG A GV  +  A P E  P                                 
Sbjct: 63  SQLAPSFPGHAQGVRFSGAAAPAEAAPAKAAATAEEDDDDLDLFGDETEEDKKAAEEREA 122

Query: 617 XXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKKLEETVRSIEMPGLLWGASKLVAVGYGI 438
                            VLLDVKPWDDETDMKKLEE VRSIEMPGLLWGASKLV VGYGI
Sbjct: 123 AKKPAKKKESGKFS---VLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGI 179

Query: 437 KKLQIMMTIXXXXXXXXXXVEERLTVEPANEFIQSCDIVAFNKI 306
           KKL+IMMTI          VEERLTVEP NE+IQSCDIVAFNKI
Sbjct: 180 KKLRIMMTIVDDLVSVDTLVEERLTVEPCNEYIQSCDIVAFNKI 223


>gb|AEO32729.1| hypothetical protein [Amblyomma maculatum]
          Length = 257

 Score =  216 bits (550), Expect = 8e-54
 Identities = 122/251 (48%), Positives = 148/251 (58%)
 Frame = -1

Query: 1058 TPLCYIRF*GLQNPHIPQPPS*V*MAVVTFADLYTEAGVKCLDEYLAGKTYISGDQLTKD 879
            +P+C+ R  G     +    S +    VTF+DL+TEAG+K L+ YL+GK+YISGD+++KD
Sbjct: 11   SPICFSRVCGF----LLASTSKLLQMAVTFSDLHTEAGIKTLEVYLSGKSYISGDKISKD 66

Query: 878  DIKVYAAVPVKPDASLSNATAWYETVSSALSKSFPGKALGVSVAVKAEPDEQVPXXXXXX 699
            D+KV+ +VP +P     NA  WY++VS AL+  FPG+A+GV    +              
Sbjct: 67   DVKVFGSVPQRPGNDSPNACKWYDSVSKALASRFPGEAVGVKYVSQPSSAPAPAAAAPQA 126

Query: 698  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLLDVKPWDDETDMKK 519
                                                       SVLLDVKPWDDETDMKK
Sbjct: 127  AAEEDDDDDLGLFEDETEEEKKVAEERAAAAKASTKKKESGKSSVLLDVKPWDDETDMKK 186

Query: 518  LEETVRSIEMPGLLWGASKLVAVGYGIKKLQIMMTIXXXXXXXXXXVEERLTVEPANEFI 339
            LEE VRSIEMPGLLWGASKLVAVGYGIKKLQIMMTI          +EERLTVEPANE+I
Sbjct: 187  LEEAVRSIEMPGLLWGASKLVAVGYGIKKLQIMMTIVDDLVSVDDLIEERLTVEPANEYI 246

Query: 338  QSCDIVAFNKI 306
            QSCDIVAFNKI
Sbjct: 247  QSCDIVAFNKI 257


Top