BLASTX nr result

ID: Coptis21_contig00002758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002758
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273999.2| PREDICTED: APO protein 4, mitochondrial-like...   437   e-120
ref|XP_002327942.1| predicted protein [Populus trichocarpa] gi|2...   419   e-114
ref|XP_002527241.1| APO protein 4, mitochondrial precursor, puta...   417   e-114
ref|XP_004151879.1| PREDICTED: APO protein 4, mitochondrial-like...   405   e-110
ref|XP_004158556.1| PREDICTED: APO protein 4, mitochondrial-like...   404   e-110

>ref|XP_002273999.2| PREDICTED: APO protein 4, mitochondrial-like [Vitis vinifera]
          Length = 329

 Score =  437 bits (1123), Expect = e-120
 Identities = 205/299 (68%), Positives = 245/299 (81%), Gaps = 3/299 (1%)
 Frame = +2

Query: 419  YYSSKINWSKLRPMIHKRIENRSSKYPLKSMVAYA--VLDARAILFQGVSTLLKYIPVKA 592
            +YS K++  KLRPMI KRIENR+ +YP+ SM+  A  VL AR++L QGVSTL+   PV A
Sbjct: 24   FYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQDVLKARSLLIQGVSTLMNVFPVMA 83

Query: 593  CKFCPPVFIGEKGHIIESCYGFRRRAKNQVHEWIDGSLNDILVPVEAFHLHNMFQDLIKH 772
            CKFCP V+IGE+GH+I++CYG++RR+KNQVHEWI GSLNDILVPVE FHL  MFQD+IKH
Sbjct: 84   CKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISGSLNDILVPVETFHLQKMFQDVIKH 143

Query: 773  DQRFDFDRIPAALELCCQAGANIYEENLHSCNWASDTNENGV-AADSRTHQELQSVAIET 949
             QRFDFDR+PA  ELC QAGA++ EENL S +W S++  +GV    S +  EL+ VA  T
Sbjct: 144  HQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSESTFSGVHGTKSLSPDELKFVATGT 203

Query: 950  LEAWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGHKARLCGVFKHESWWGSHIWKKAEV 1129
            L AWE LRSG++RLLLVYPAKVCK+CSEVHVGPSGHKARLCGVFK+ESW G+H WKKA+V
Sbjct: 204  LRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSGHKARLCGVFKYESWRGAHFWKKADV 263

Query: 1130 DDFIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVELCFQAGAFVPNKYHCMMKVNGLP 1306
            DD +PPK+VWR+RPQDP VL NEGRDFYGHAPAVV+LC +AGA  P +YH MMKV GLP
Sbjct: 264  DDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVVDLCTKAGAIAPARYHSMMKVQGLP 322


>ref|XP_002327942.1| predicted protein [Populus trichocarpa] gi|222837351|gb|EEE75730.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  419 bits (1076), Expect = e-114
 Identities = 197/298 (66%), Positives = 234/298 (78%), Gaps = 3/298 (1%)
 Frame = +2

Query: 419  YYSSKINWSKLRPMIHKRIENRSSKYPLKSMVAYA--VLDARAILFQGVSTLLKYIPVKA 592
            +YSS++++ KLRPMI KRI+NR+  YP+K MV  A  VL+ R +L QGVSTL++  PV A
Sbjct: 5    FYSSRVDFKKLRPMILKRIQNRAKDYPVKGMVPVAREVLEKRKLLIQGVSTLMEVFPVLA 64

Query: 593  CKFCPPVFIGEKGHIIESCYGFRRRAKNQVHEWIDGSLNDILVPVEAFHLHNMFQDLIKH 772
            CKFCP V+IGEKGH+I++CYG++R  + +VHEWI G LNDILVPVE F L NMFQD+I+H
Sbjct: 65   CKFCPEVYIGEKGHLIQTCYGYKRCGRKRVHEWIPGGLNDILVPVETFRLDNMFQDVIEH 124

Query: 773  DQRFDFDRIPAALELCCQAGANIYEENLHSCNWASDTNENGV-AADSRTHQELQSVAIET 949
            DQRFDFDR+PA +ELC QAGANI +ENLH      D     +   +  +   L  +A E 
Sbjct: 125  DQRFDFDRVPAVVELCRQAGANIDDENLHPGMLDLDGGIGHIDGGEPFSPSHLMYIAKEI 184

Query: 950  LEAWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGHKARLCGVFKHESWWGSHIWKKAEV 1129
            L+AWE LRSGVQRLLLVYP+KVCKHCSEVH+GPSGHKARLCGVFK ESW G H WKKAEV
Sbjct: 185  LDAWEKLRSGVQRLLLVYPSKVCKHCSEVHIGPSGHKARLCGVFKFESWHGKHFWKKAEV 244

Query: 1130 DDFIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVELCFQAGAFVPNKYHCMMKVNGL 1303
            DD +PPK+VWRRRPQDPLVL NEGRDFYGHAPAVV+LC + G  VP KY CMMK+ GL
Sbjct: 245  DDLVPPKIVWRRRPQDPLVLVNEGRDFYGHAPAVVDLCTKTGIIVPTKYSCMMKIQGL 302


>ref|XP_002527241.1| APO protein 4, mitochondrial precursor, putative [Ricinus communis]
            gi|223533417|gb|EEF35167.1| APO protein 4, mitochondrial
            precursor, putative [Ricinus communis]
          Length = 325

 Score =  417 bits (1072), Expect = e-114
 Identities = 199/318 (62%), Positives = 251/318 (78%), Gaps = 3/318 (0%)
 Frame = +2

Query: 359  QRVSRDLLKELNAHLLQSKCYYSSKINWSKLRPMIHKRIENRSSKYPLKSMV--AYAVLD 532
            +++ +D  +    H+   + +YSS+++W KLRPMI KRIENR+  YP++ +V  A+ VL 
Sbjct: 5    KKIWQDFARFYGNHITHFR-FYSSQVDWKKLRPMILKRIENRAKDYPVRDLVPVAHEVLQ 63

Query: 533  ARAILFQGVSTLLKYIPVKACKFCPPVFIGEKGHIIESCYGFRRRAKNQVHEWIDGSLND 712
            AR +L QGVSTL++ IPV ACKFCP V IGE+GH+I++C+G+RR AKN+VHEWI G LND
Sbjct: 64   ARMLLIQGVSTLIQVIPVVACKFCPEVHIGERGHLIQTCWGYRRGAKNRVHEWIGGGLND 123

Query: 713  ILVPVEAFHLHNMFQDLIKHDQRFDFDRIPAALELCCQAGANIYEENLHSCNWASDTNEN 892
            ILVPVE F L++ FQ +IKHDQRFDFDR+PA +ELC QAGA + +ENL+    +SD   N
Sbjct: 124  ILVPVETFRLNSTFQKVIKHDQRFDFDRVPAIVELCRQAGAYVTDENLYYGLRSSDNVIN 183

Query: 893  GV-AADSRTHQELQSVAIETLEAWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGHKARL 1069
            GV  A+S + ++LQ VA  TL AWE LRSGVQRLLLVY AKVCK+CSE+HVGPSGHKAR 
Sbjct: 184  GVDKAESLSAEDLQFVANGTLRAWETLRSGVQRLLLVYQAKVCKYCSEIHVGPSGHKARH 243

Query: 1070 CGVFKHESWWGSHIWKKAEVDDFIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVELCFQ 1249
            CG+FK+ESW GSH W++A VDD +PPK+VWRRRPQDP VL NEGR+FYGHAPA+V+LC +
Sbjct: 244  CGIFKYESWRGSHFWERARVDDLVPPKIVWRRRPQDPPVLLNEGRNFYGHAPAIVDLCTK 303

Query: 1250 AGAFVPNKYHCMMKVNGL 1303
            AGA  P KY+CMMK  GL
Sbjct: 304  AGAIAPTKYYCMMKNQGL 321


>ref|XP_004151879.1| PREDICTED: APO protein 4, mitochondrial-like [Cucumis sativus]
          Length = 330

 Score =  405 bits (1042), Expect = e-110
 Identities = 189/298 (63%), Positives = 232/298 (77%), Gaps = 2/298 (0%)
 Frame = +2

Query: 422  YSSKINWSKLRPMIHKRIENRSSKYPLKSM--VAYAVLDARAILFQGVSTLLKYIPVKAC 595
            YSSK+N  KLRPMI KRI++R+  YP+K M  VA  VL+ARA+L  GVSTLLK  PV +C
Sbjct: 27   YSSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVAQQVLEARAMLIHGVSTLLKSFPVLSC 86

Query: 596  KFCPPVFIGEKGHIIESCYGFRRRAKNQVHEWIDGSLNDILVPVEAFHLHNMFQDLIKHD 775
            KFCP V++GE+GH+I SC G++R AKNQVH+WI G L DI+VPVEAFHLH+MFQD+IKHD
Sbjct: 87   KFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIRGDLKDIIVPVEAFHLHHMFQDVIKHD 146

Query: 776  QRFDFDRIPAALELCCQAGANIYEENLHSCNWASDTNENGVAADSRTHQELQSVAIETLE 955
            +RF+F+R+PA +ELC QAGAN  ++NL S    S         +  +  E+  +A ET+ 
Sbjct: 147  ERFNFERVPAVVELCSQAGANPDDKNLASSTQNSAEGGGSGMDEPLSDHEMMLLATETIR 206

Query: 956  AWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGHKARLCGVFKHESWWGSHIWKKAEVDD 1135
            AWE LR+GVQ+LL+VYP KVCK+CSEVHVGPSGHKARLCGVF +ESW GSH W+KA+VDD
Sbjct: 207  AWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSGHKARLCGVFTYESWRGSHFWEKADVDD 266

Query: 1136 FIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVELCFQAGAFVPNKYHCMMKVNGLPP 1309
             +PPK+VW RR QDP VL ++G+D+YGHAPAVV LC QAG   P KYHCMMKV GL P
Sbjct: 267  LVPPKIVWHRRQQDPPVLVDKGKDYYGHAPAVVALCTQAGVIAPFKYHCMMKVQGLSP 324


>ref|XP_004158556.1| PREDICTED: APO protein 4, mitochondrial-like [Cucumis sativus]
          Length = 330

 Score =  404 bits (1037), Expect = e-110
 Identities = 188/298 (63%), Positives = 232/298 (77%), Gaps = 2/298 (0%)
 Frame = +2

Query: 422  YSSKINWSKLRPMIHKRIENRSSKYPLKSM--VAYAVLDARAILFQGVSTLLKYIPVKAC 595
            YSSK+N  KLRPMI KRI++R+  YP+K M  VA  VL+ARA+L  GVSTLLK  PV +C
Sbjct: 27   YSSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVAQQVLEARAMLIHGVSTLLKSFPVLSC 86

Query: 596  KFCPPVFIGEKGHIIESCYGFRRRAKNQVHEWIDGSLNDILVPVEAFHLHNMFQDLIKHD 775
            KFCP V++GE+GH+I SC G++R AKNQVH+WI G L DI+VPVEAFHLH+MFQD+IKHD
Sbjct: 87   KFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIRGDLKDIIVPVEAFHLHHMFQDVIKHD 146

Query: 776  QRFDFDRIPAALELCCQAGANIYEENLHSCNWASDTNENGVAADSRTHQELQSVAIETLE 955
            +RF+F+R+PA +ELC QAGAN  +++L S    S         +  +  E+  +A ET+ 
Sbjct: 147  ERFNFERVPAVVELCSQAGANPDDKDLASSTQNSAEGGGSGMDEPLSDHEMMLLATETIR 206

Query: 956  AWENLRSGVQRLLLVYPAKVCKHCSEVHVGPSGHKARLCGVFKHESWWGSHIWKKAEVDD 1135
            AWE LR+GVQ+LL+VYP KVCK+CSEVHVGPSGHKARLCGVF +ESW GSH W+KA+VDD
Sbjct: 207  AWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSGHKARLCGVFTYESWRGSHFWEKADVDD 266

Query: 1136 FIPPKVVWRRRPQDPLVLCNEGRDFYGHAPAVVELCFQAGAFVPNKYHCMMKVNGLPP 1309
             +PPK+VW RR QDP VL ++G+D+YGHAPAVV LC QAG   P KYHCMMKV GL P
Sbjct: 267  LVPPKIVWHRRQQDPPVLVDKGKDYYGHAPAVVALCTQAGVIAPFKYHCMMKVQGLSP 324


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