BLASTX nr result

ID: Coptis21_contig00002750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002750
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282805.1| PREDICTED: uncharacterized protein LOC100244...    69   4e-10
ref|XP_003531907.1| PREDICTED: uncharacterized protein LOC100802...    66   3e-09
ref|XP_002329255.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
emb|CAN65241.1| hypothetical protein VITISV_025050 [Vitis vinifera]    60   1e-07
ref|XP_003551793.1| PREDICTED: uncharacterized protein LOC100783...    57   1e-06

>ref|XP_002282805.1| PREDICTED: uncharacterized protein LOC100244706 [Vitis vinifera]
           gi|298204399|emb|CBI16879.3| unnamed protein product
           [Vitis vinifera]
          Length = 421

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/57 (61%), Positives = 36/57 (63%)
 Frame = +1

Query: 61  QRGPVYDPSRGPGYDASVRGPGYDAPPRTAAGPQGQMVAPANTAQYGSVTPPTRAGG 231
           QRGP YD  RGP YDA  RG  YDAP R A GP GQ V   N   YGS TPP R+GG
Sbjct: 353 QRGPAYDGQRGPVYDAP-RGTNYDAPTRAAPGPHGQ-VPSGNNVPYGSATPPARSGG 407


>ref|XP_003531907.1| PREDICTED: uncharacterized protein LOC100802139 [Glycine max]
          Length = 418

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/57 (59%), Positives = 35/57 (61%)
 Frame = +1

Query: 61  QRGPVYDPSRGPGYDASVRGPGYDAPPRTAAGPQGQMVAPANTAQYGSVTPPTRAGG 231
           QRGP YD  RGP YDA  R  GYDA  R AAGP G    P N   YGS TPP R+GG
Sbjct: 351 QRGPGYDMQRGPAYDAP-RADGYDAQSRGAAGPHGH-APPMNNMPYGSTTPPARSGG 405


>ref|XP_002329255.1| predicted protein [Populus trichocarpa] gi|222870709|gb|EEF07840.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/64 (54%), Positives = 38/64 (59%), Gaps = 8/64 (12%)
 Frame = +1

Query: 61  QRGPVYDPSRGPGYDA-------SVRGPGYDAPP-RTAAGPQGQMVAPANTAQYGSVTPP 216
           QRG  YD  RG GYDA       + RG GYDA   R AAGPQG +  PAN   YGS TPP
Sbjct: 369 QRGHAYDAQRGQGYDAQRLPNYHASRGAGYDAAASRGAAGPQGHVAPPANNMPYGSATPP 428

Query: 217 TRAG 228
           T +G
Sbjct: 429 THSG 432


>emb|CAN65241.1| hypothetical protein VITISV_025050 [Vitis vinifera]
          Length = 562

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 15/70 (21%)
 Frame = +1

Query: 61  QRGPVYDPSRGPGYDA---------------SVRGPGYDAPPRTAAGPQGQMVAPANTAQ 195
           QRGP YD  +GPGYDA               + RG  YDAP R A GP GQ V   N   
Sbjct: 337 QRGPGYDAQKGPGYDAQRGPAYDGQRGPVYDAPRGTNYDAPTRAAPGPHGQ-VPSGNNVP 395

Query: 196 YGSVTPPTRA 225
           YGS TPP R+
Sbjct: 396 YGSATPPARS 405


>ref|XP_003551793.1| PREDICTED: uncharacterized protein LOC100783811 [Glycine max]
          Length = 404

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/57 (52%), Positives = 32/57 (56%)
 Frame = +1

Query: 61  QRGPVYDPSRGPGYDASVRGPGYDAPPRTAAGPQGQMVAPANTAQYGSVTPPTRAGG 231
           +RG  YD  R P YDA  R  GYDA  R  AGP G    P N   YGS TPP R+GG
Sbjct: 337 KRGSGYDMQRAPAYDAP-RAAGYDAQSRGVAGPHGH-ARPMNNMPYGSTTPPARSGG 391


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