BLASTX nr result

ID: Coptis21_contig00002748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002748
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264202.1| PREDICTED: uncharacterized protein LOC100265...   123   7e-26
gb|ABF93757.1| expressed protein [Oryza sativa Japonica Group] g...   115   2e-23
ref|XP_002526980.1| S-adenosylmethionine-dependent methyltransfe...   114   4e-23
ref|XP_002297904.1| predicted protein [Populus trichocarpa] gi|2...   113   7e-23
gb|EEC74431.1| hypothetical protein OsI_09810 [Oryza sativa Indi...   113   9e-23

>ref|XP_002264202.1| PREDICTED: uncharacterized protein LOC100265576 [Vitis vinifera]
           gi|296087558|emb|CBI34147.3| unnamed protein product
           [Vitis vinifera]
          Length = 328

 Score =  123 bits (309), Expect = 7e-26
 Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 3/102 (2%)
 Frame = +3

Query: 402 TWLELSNKLMSHGRIMVNCGGA--HAKTVESRDGITHQNSWDKNSTIRALCGVFAGNLCW 575
           TWL L +KLM++GR+MVNCGGA  ++  + S +G+     W KNST++ALC  F G L W
Sbjct: 228 TWLILKDKLMANGRLMVNCGGADYNSAQISSINGV-----WVKNSTLKALCRAFPGQLSW 282

Query: 576 KKM-EGDGENYLALTGPFPDLDAWSALVPEQLSLNVKEWRPC 698
           KKM E +GENYLALTGPFPDL +WSA VP  LS NV++WRPC
Sbjct: 283 KKMSEREGENYLALTGPFPDLKSWSATVPGWLSSNVEQWRPC 324


>gb|ABF93757.1| expressed protein [Oryza sativa Japonica Group]
           gi|215692845|dbj|BAG88183.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 335

 Score =  115 bits (287), Expect = 2e-23
 Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = +3

Query: 384 RLDLVTTWLELSNKLMSHGRIMVNCGGAHAKTVESRDGITHQNSWDKNSTIRALCGVFAG 563
           +L  V TWLE++ KLM  GRI+VNCGGA A    + D  T  +SW +NSTI+ALC  F G
Sbjct: 229 QLQEVETWLEIAKKLMPDGRIIVNCGGADAAVSLAND--TGLSSWVQNSTIKALCAAFPG 286

Query: 564 NLCWKKM-EGDGENYLALTGPFPDLDAWSALVPEQLSLNVKEWRPCHFS 707
            L WK++ E +  NY+ALTGP P+LD WS  VP ++S  VK+W PC  +
Sbjct: 287 QLNWKRLSEKESVNYVALTGPLPNLDEWSTSVPSEMSTKVKQWVPCELA 335


>ref|XP_002526980.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus
           communis] gi|223533671|gb|EEF35407.1|
           S-adenosylmethionine-dependent methyltransferase,
           putative [Ricinus communis]
          Length = 353

 Score =  114 bits (285), Expect = 4e-23
 Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
 Frame = +3

Query: 384 RLDLVTTWLELSNKLMSHGRIMVNCGGAHAKTVESRDGITHQNS----WDKNSTIRALCG 551
           +L  V TWL+L+ +LM++GRIM NCGG + K+ ++ DG  H  S    W +NSTI+ L  
Sbjct: 241 QLQEVATWLKLNGRLMANGRIMANCGGINEKS-DNADGTIHPESIDGTWIENSTIKTLSE 299

Query: 552 VFAGNLCWKKM-EGDGENYLALTGPFPDLDAWSALVPEQLSLNVKEWRPC 698
            F G + WK+M E  G NYLALTGP PDL  WS+ VP+ LS NV+ WRPC
Sbjct: 300 AFPGQVNWKRMPETQGANYLALTGPLPDLTLWSSKVPDPLSENVRRWRPC 349


>ref|XP_002297904.1| predicted protein [Populus trichocarpa] gi|222845162|gb|EEE82709.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  113 bits (283), Expect = 7e-23
 Identities = 56/113 (49%), Positives = 72/113 (63%), Gaps = 8/113 (7%)
 Frame = +3

Query: 384 RLDLVTTWLELSNKLMSHGRIMVNCGGAHAKTVESRDGITHQ-------NSWDKNSTIRA 542
           +L  V TWLEL  +L+ +GR+MVNCGG     +E  D I  +       N+W +N TI+ 
Sbjct: 246 QLQEVATWLELKGRLIPNGRLMVNCGG-----IEESDAINERISTKSVDNAWVENPTIKV 300

Query: 543 LCGVFAGNLCWKKM-EGDGENYLALTGPFPDLDAWSALVPEQLSLNVKEWRPC 698
           LC  F G L WK++ E +G NYLALTGP PDL +WSA+VP  LS  V +WRPC
Sbjct: 301 LCEAFPGQLSWKRVPESEGANYLALTGPLPDLTSWSAMVPVHLSAAVSKWRPC 353


>gb|EEC74431.1| hypothetical protein OsI_09810 [Oryza sativa Indica Group]
          Length = 337

 Score =  113 bits (282), Expect = 9e-23
 Identities = 56/109 (51%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
 Frame = +3

Query: 384 RLDLVTTWLELSNKLMSHGRIMVNCGGAHAKTVESRDGITHQNSWDKNSTIRALCGVFAG 563
           +L  V TWLE++ KLM  GRIMVNCGGA A    + D     +SW +N TI+ALC  F G
Sbjct: 231 QLQEVETWLEIAKKLMPDGRIMVNCGGADAAVSLADD--MGLSSWVQNPTIKALCAAFPG 288

Query: 564 NLCWKKM-EGDGENYLALTGPFPDLDAWSALVPEQLSLNVKEWRPCHFS 707
            L WK++ E +  NY+ALTGP PDLD WS  VP ++S  VK+W PC  +
Sbjct: 289 QLNWKRLSEKESVNYVALTGPLPDLDEWSTSVPSEMSSKVKQWVPCELA 337


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