BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002733
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853...    85   3e-14
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...    80   8e-13
emb|CAA15421.1| HMR1 protein [Antirrhinum majus]                       74   8e-11
gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]                 72   2e-10
ref|XP_002894121.1| hypothetical protein ARALYDRAFT_474000 [Arab...    70   1e-09

>ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera]
           gi|147815426|emb|CAN74749.1| hypothetical protein
           VITISV_021497 [Vitis vinifera]
           gi|297734307|emb|CBI15554.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 48/110 (43%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
 Frame = +2

Query: 35  MDPSVASVIPP---------AQAHMAHAL--TQPLKPSSNHPPYAEMIVSAXXXXXXXXX 181
           MDP+    +PP         ++AH+AHA   T    P  NHPPYAEMI +A         
Sbjct: 1   MDPAPPPPLPPPPPPQPPAASEAHVAHAANPTPSHGPPHNHPPYAEMITTAIGALNERTG 60

Query: 182 XXXXXXXXXXDSTYVNLPQSHSALLTHHLKRLKKNGMVLMVKHSYKLPTS 331
                     + T+ +LP SH ALLTHHLKRL+ +G V+MVKHSY LP S
Sbjct: 61  SSKKAIAKYIERTFGDLPPSHPALLTHHLKRLRSSGQVVMVKHSYMLPRS 110


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
 Frame = +2

Query: 5   KLPLFSLSSHMDPSVAS--VIPPAQ-------------AHMAHALTQPLKPSSNHPPYAE 139
           +LP  ++++   PS AS  +IPP+              AH A+A    +  S NHPPY +
Sbjct: 15  QLPPATITAAAVPSAASTQIIPPSPPVTAEAAAAHNHVAHAANATAPTVAQSFNHPPYTD 74

Query: 140 MIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSHSALLTHHLKRLKKNGMVLMVKHSYK 319
           MI +A                   +  Y  LP +HSALLTHHLKRLK  G+++MVK SYK
Sbjct: 75  MIYAAITALKERDGSSKRAIAKYIERVYPGLPPTHSALLTHHLKRLKNTGLLVMVKKSYK 134

Query: 320 LPTS 331
           LP S
Sbjct: 135 LPRS 138


>emb|CAA15421.1| HMR1 protein [Antirrhinum majus]
          Length = 400

 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
 Frame = +2

Query: 41  PSVASVIPP--AQAHMAHALTQPLK---PSSNHPPYAEMIVSAXXXXXXXXXXXXXXXXX 205
           P V   +P   A+A + + +  P     P+ NHPPYAEMI SA                 
Sbjct: 19  PPVPVPVPTTTAEAPIPNPVANPTPKRAPAHNHPPYAEMITSAISALNERNGSSKRAIAK 78

Query: 206 XXDSTYVNLPQSHSALLTHHLKRLKKNGMVLMVKHSYKLPTSS 334
             +S +  LP +H++LL  HLKRLK  G +LMVKHSYKLP S+
Sbjct: 79  YVESNFTGLPATHASLLATHLKRLKDTGDILMVKHSYKLPRSA 121


>gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
          Length = 546

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 36/70 (51%), Positives = 40/70 (57%)
 Frame = +2

Query: 113 SSNHPPYAEMIVSAXXXXXXXXXXXXXXXXXXXDSTYVNLPQSHSALLTHHLKRLKKNGM 292
           S  HPPYAEMI +A                   D  Y NLP +HSALLTHHLKRLK +G 
Sbjct: 41  SPTHPPYAEMITAAITALKERDGSSRIAIAKYIDRVYTNLPPNHSALLTHHLKRLKNSGY 100

Query: 293 VLMVKHSYKL 322
           + MVKHSY L
Sbjct: 101 LAMVKHSYML 110


>ref|XP_002894121.1| hypothetical protein ARALYDRAFT_474000 [Arabidopsis lyrata subsp.
           lyrata] gi|297339963|gb|EFH70380.1| hypothetical protein
           ARALYDRAFT_474000 [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
 Frame = +2

Query: 11  PLFSLSSHMDPSVASVIPPAQAHMAHALTQ-------PLKPSSNHPPYAEMIVSAXXXXX 169
           P  S +        +V PP   H+  A          P  PS +HPPY++MI +A     
Sbjct: 29  PFASQNHPFFTGATAVAPPNNIHLYQAAPPQPQTSPVPPHPSISHPPYSDMICTAIAALN 88

Query: 170 XXXXXXXXXXXXXXDSTYVNLPQSHSALLTHHLKRLKKNGMVLMVKHSYKL-----PTSS 334
                         +  Y  +P +H ALLTHHLK LK +G+++MVK SYKL     PTS 
Sbjct: 89  EPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGILMMVKKSYKLAATPPPTSV 148

Query: 335 VGADGV 352
             A G+
Sbjct: 149 DAASGL 154