BLASTX nr result

ID: Coptis21_contig00002724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002724
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93893.1| unknown [Populus trichocarpa]                          149   3e-34
ref|XP_002310845.1| predicted protein [Populus trichocarpa] gi|2...   148   8e-34
ref|XP_002328706.1| predicted protein [Populus trichocarpa] gi|1...   148   8e-34
ref|XP_002327674.1| predicted protein [Populus trichocarpa] gi|2...   147   2e-33
ref|XP_002331140.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33

>gb|ABK93893.1| unknown [Populus trichocarpa]
          Length = 209

 Score =  149 bits (377), Expect = 3e-34
 Identities = 78/131 (59%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   GIGIHLLQRNSITDDAKPKPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEGG 182
           GIGIHLL+    +D A  K S INPKDNHISFQC+D+ LV +KL E  ++YV A+VEEGG
Sbjct: 73  GIGIHLLE----SDKAPTKKSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGG 128

Query: 183 ITVDQLFFHDPDGYMIEICNCENLPVLPLSACPL-KKPQPLVDSNKIKNESSFPSSKVLR 359
           ITVDQLFFHDPDGYM+EICNC+NLPVLPLS+CPL K P+P        +     S ++  
Sbjct: 129 ITVDQLFFHDPDGYMVEICNCQNLPVLPLSSCPLIKAPKPSASLASSPSLYGKQSWELRC 188

Query: 360 AADVETRMMDN 392
            A+V + MMDN
Sbjct: 189 FAEVASVMMDN 199


>ref|XP_002310845.1| predicted protein [Populus trichocarpa] gi|222853748|gb|EEE91295.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  148 bits (374), Expect = 8e-34
 Identities = 67/96 (69%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
 Frame = +3

Query: 3   GIGIHLLQRNSITD-DAKPKPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEG 179
           GIGIHL++  SI + D+  +P  INPKDNH+SFQCTD+ LVKRKL EMGM+YV A+VEE 
Sbjct: 62  GIGIHLIENPSIDEFDSIVEPRPINPKDNHMSFQCTDVGLVKRKLQEMGMRYVTAVVEED 121

Query: 180 GITVDQLFFHDPDGYMIEICNCENLPVLPLSACPLK 287
           GI VDQ+FFHDPDGYM+EICNC+N+P+LPLS+CP K
Sbjct: 122 GIKVDQVFFHDPDGYMVEICNCDNIPILPLSSCPFK 157


>ref|XP_002328706.1| predicted protein [Populus trichocarpa] gi|118483150|gb|ABK93481.1|
           unknown [Populus trichocarpa]
           gi|222839004|gb|EEE77355.1| predicted protein [Populus
           trichocarpa]
          Length = 213

 Score =  148 bits (374), Expect = 8e-34
 Identities = 80/136 (58%), Positives = 97/136 (71%), Gaps = 6/136 (4%)
 Frame = +3

Query: 3   GIGIHLLQRNSITDDAKPKPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEGG 182
           GIGIHLL+    +D A  K S INPKDNHISFQC+D+ LV +KL E  ++YV A+VEEGG
Sbjct: 77  GIGIHLLE----SDKAPAKKSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGG 132

Query: 183 ITVDQLFFHDPDGYMIEICNCENLPVLPLSACPLKKPQPLVDSNKIKNESSFPSS----- 347
           ITVDQLFFHDPDG+M+EICNC+NLPVLPLSACP+K P+        K  SS PS      
Sbjct: 133 ITVDQLFFHDPDGHMVEICNCQNLPVLPLSACPIKLPK-----TNGKLASSVPSLCGKQS 187

Query: 348 -KVLRAADVETRMMDN 392
            ++   A+V + MMDN
Sbjct: 188 WELQCFAEVASLMMDN 203


>ref|XP_002327674.1| predicted protein [Populus trichocarpa] gi|222836759|gb|EEE75152.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  147 bits (370), Expect = 2e-33
 Identities = 67/97 (69%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
 Frame = +3

Query: 3   GIGIHLLQRNSITD--DAKPKPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEE 176
           GIGIHL++  SI    D   +P  INPKDNH+SFQCTD+ LVKR+L EMGM+YV A+VEE
Sbjct: 62  GIGIHLIENPSIDHEFDTIVEPRPINPKDNHMSFQCTDVGLVKRRLQEMGMRYVTAVVEE 121

Query: 177 GGITVDQLFFHDPDGYMIEICNCENLPVLPLSACPLK 287
            GI VDQ+FFHDPDGYM+EICNC+N+P+LPLS+CPLK
Sbjct: 122 DGIMVDQVFFHDPDGYMVEICNCDNIPILPLSSCPLK 158


>ref|XP_002331140.1| predicted protein [Populus trichocarpa] gi|222872868|gb|EEF09999.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  146 bits (369), Expect = 3e-33
 Identities = 71/100 (71%), Positives = 83/100 (83%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   GIGIHLLQRNSITDDAKPKPSVINPKDNHISFQCTDIELVKRKLGEMGMKYVDAIVEEGG 182
           GIGIHLL+    +D A  K S INPKDNHISFQC+D+ LV +KL E  ++YV A+VEEGG
Sbjct: 48  GIGIHLLE----SDKAPTKKSKINPKDNHISFQCSDMNLVIKKLEEKNIEYVTAVVEEGG 103

Query: 183 ITVDQLFFHDPDGYMIEICNCENLPVLPLSACPL-KKPQP 299
           ITVDQLFFHDPDGYM+EICNC+NLPVLPLS+CPL K P+P
Sbjct: 104 ITVDQLFFHDPDGYMVEICNCQNLPVLPLSSCPLIKAPKP 143


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