BLASTX nr result
ID: Coptis21_contig00002722
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002722 (962 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g... 269 6e-70 ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2... 257 3e-66 emb|CBI38318.3| unnamed protein product [Vitis vinifera] 256 6e-66 ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm... 253 5e-65 ref|XP_002513764.1| conserved hypothetical protein [Ricinus comm... 249 7e-64 >ref|XP_002308717.1| f-box family protein [Populus trichocarpa] gi|222854693|gb|EEE92240.1| f-box family protein [Populus trichocarpa] Length = 292 Score = 269 bits (688), Expect = 6e-70 Identities = 141/274 (51%), Positives = 182/274 (66%), Gaps = 17/274 (6%) Frame = +1 Query: 4 PLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGSVSDLNLSDFKSKKELYFRLCD 183 P D C LS+VSS+FKSA +SD +WE+FLP +Y+ I+ S S + LS SKKELY RLC+ Sbjct: 20 PRDACRLSIVSSLFKSAGESDAVWERFLPRDYQSIIFTSDSYVLLSSLSSKKELYLRLCE 79 Query: 184 DPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVCL 363 PII++ G KSF L K++GKKC+ML A++L I WGDTP +W W S SRF EVA L+ + Sbjct: 80 KPIIIDDGKKSFSLVKKSGKKCYMLSARDLMIVWGDTPTYWRWNSDSSSRFGEVAELIGV 139 Query: 364 CVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTVY 543 C L+I G+I+ MLSP T YAAYLVFK + +YGLD E V V GS +G R VY Sbjct: 140 CWLEICGKINATMLSPATLYAAYLVFKPKEGAYGLDYQPVEVGVGLV---GSENGKRNVY 196 Query: 544 LDPEFNRAP--HRPRRRSSV---------------TQYVGQLPSARGDRWMEIELGEFYN 672 LD + RA H RRR + ++ GQ P RGD W+EIELGEF+ Sbjct: 197 LDSQRGRAHRYHLVRRRIGLHNRSRIVGMQEPVPASENNGQHPKERGDGWLEIELGEFFC 256 Query: 673 DQGEDGEVKMTLEEVKAGNWRTGLIVEGIEVRPK 774 +GEDGE++M ++EVK+G+W+ GL VEGIE+RPK Sbjct: 257 KEGEDGELEMRVQEVKSGDWKGGLTVEGIEIRPK 290 >ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1| predicted protein [Populus trichocarpa] Length = 304 Score = 257 bits (656), Expect = 3e-66 Identities = 136/275 (49%), Positives = 175/275 (63%), Gaps = 18/275 (6%) Frame = +1 Query: 4 PLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGS-VSDLNLSDFKSKKELYFRLC 180 P D C LS+V S+FK+A +SD +WE+FLP +Y+ I+S S S + L+ SKK LY LC Sbjct: 30 PRDACRLSMVCSLFKAAEESDFVWERFLPRDYQSIISKSDASSMLLASASSKKHLYLMLC 89 Query: 181 DDPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVC 360 + P+I+EGG KS LEK++GKKC+ML A++L I WGDTP +W+W S P SRF EVA L+ Sbjct: 90 EKPLIIEGGKKSISLEKKSGKKCYMLSARDLIIVWGDTPTYWKWNSDPSSRFGEVAELIS 149 Query: 361 LCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTV 540 +C L+I G+I+ MLSP T Y AYLVF+ T YGLD E V V GS G R V Sbjct: 150 VCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYGLDYQPVEVGVGLV---GSECGMRNV 206 Query: 541 YLDPEFNRAP--HRPRRR---------------SSVTQYVGQLPSARGDRWMEIELGEFY 669 YLD E R H RR + GQ P R D W+EIELGEF+ Sbjct: 207 YLDSERGRRQQYHFVSRRIGLFNRCRIVGMPASEPARENNGQYPKKREDGWLEIELGEFF 266 Query: 670 NDQGEDGEVKMTLEEVKAGNWRTGLIVEGIEVRPK 774 +GED E++M+++EVK G+W+ GLIVEGIE+RPK Sbjct: 267 CKEGEDRELEMSVQEVKGGDWKGGLIVEGIEIRPK 301 >emb|CBI38318.3| unnamed protein product [Vitis vinifera] Length = 287 Score = 256 bits (654), Expect = 6e-66 Identities = 133/263 (50%), Positives = 178/263 (67%), Gaps = 3/263 (1%) Frame = +1 Query: 1 SPLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGSVSDLNLSDFKSKKELYFRLC 180 SP DVC +S V+S+F SAA+SD +WE+FLP++Y+EI++ S + F SKKELYF LC Sbjct: 36 SPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESSSWRHFSSKKELYFTLC 95 Query: 181 DDPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVC 360 D P++++ G KSF LEKR+GKKC+ML ++EL I WGDTP +WEW S P+SRF EVA L Sbjct: 96 DYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQA 155 Query: 361 LCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTV 540 +C +I G+I+T MLSP T YAAYLVF +S+G ++ E S++ V G+ + R + Sbjct: 156 VCWFEIRGKINTCMLSPRTNYAAYLVFH-AGRSHGFEDVPVESSIEIV---GNETTTRVI 211 Query: 541 YLDPEFNRAPHRPRRRSSVTQYVGQ---LPSARGDRWMEIELGEFYNDQGEDGEVKMTLE 711 YL R R+ T + P R D W EIELGEF+ + GED E+++TL Sbjct: 212 YL--------ARYRKNEEPTSSIRSDLPYPKKREDSWFEIELGEFFIEGGEDTELEITLM 263 Query: 712 EVKAGNWRTGLIVEGIEVRPKRD 780 EVKAG+W+ GLIVEGIE+RPK D Sbjct: 264 EVKAGHWKDGLIVEGIEIRPKGD 286 >ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis] gi|223546849|gb|EEF48346.1| conserved hypothetical protein [Ricinus communis] Length = 301 Score = 253 bits (646), Expect = 5e-65 Identities = 133/280 (47%), Positives = 171/280 (61%), Gaps = 21/280 (7%) Frame = +1 Query: 4 PLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGSVSDLNLSDFKSKKELYFRLCD 183 P D C LS VSS F+ AA+SD +WEKFLP +Y I+S S L F SKK+LYF LCD Sbjct: 29 PFDACRLSTVSSTFRDAANSDTVWEKFLPQDYHSIISRSSDSFLLDRFSSKKQLYFSLCD 88 Query: 184 DPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVCL 363 +PI+++ G KSF LEK +GKKC+ML A++L I W DTP +W W PDSRF EVA L+ + Sbjct: 89 NPILIDDGKKSFALEKWSGKKCYMLSARDLKIVWSDTPTYWRWICLPDSRFPEVAELISV 148 Query: 364 CVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTVY 543 C L+I +I+ MLSP+T Y AY VFK T +YG + E V V GS + VY Sbjct: 149 CWLEISARINISMLSPSTLYTAYFVFKSTTGAYGFEYQPAEAVVGLV---GSETCKHNVY 205 Query: 544 LDPEFNRAPHRPRRRSSVTQYVGQL---------------------PSARGDRWMEIELG 660 LD E R RR V + +G L P RGD W+EIELG Sbjct: 206 LDAERGRR----RRSQIVRRRIGLLNRGRIFGLQASLRNGESDCKYPKERGDGWLEIELG 261 Query: 661 EFYNDQGEDGEVKMTLEEVKAGNWRTGLIVEGIEVRPKRD 780 EF+ +GEDGE+++++ EVK G+W+ GL V+GIE+RPK D Sbjct: 262 EFFKKKGEDGELELSVLEVKGGHWKGGLAVQGIEIRPKVD 301 >ref|XP_002513764.1| conserved hypothetical protein [Ricinus communis] gi|223546850|gb|EEF48347.1| conserved hypothetical protein [Ricinus communis] Length = 301 Score = 249 bits (636), Expect = 7e-64 Identities = 131/282 (46%), Positives = 171/282 (60%), Gaps = 24/282 (8%) Frame = +1 Query: 1 SPLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGSVSDLNLSDFKSKKELYFRLC 180 +P D C LS VSS FK+A+ SD +WE FLP +Y I+S S LS SKK L+ LC Sbjct: 24 TPRDACNLSTVSSKFKNASLSDTVWESFLPQDYNSIISQSSHPSLLSSCSSKKHLFLSLC 83 Query: 181 DDPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVC 360 PII++ G KSF L+KRNGKKC+ML A++L I+WG TP +W W S PDSRF EVA L+ Sbjct: 84 QKPIIIDNGKKSFSLDKRNGKKCYMLSARDLKISWGGTPTYWRWISDPDSRFGEVAELIS 143 Query: 361 LCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTV 540 +C L+I G I T +LSP+T Y+AYLVFK+ +++YGL +P E V+ G GS R + Sbjct: 144 VCWLEISGTISTSLLSPSTMYSAYLVFKLNERAYGLHDPPVEAIVR--AGDGSEINKRII 201 Query: 541 YLDPEFN-----------RAPH-------------RPRRRSSVTQYVGQLPSARGDRWME 648 YLD + N R H P + Q G RGD W+E Sbjct: 202 YLDADTNLRGVRQEPLLLRTRHGLFGPSDIAEESETPEHSGNDGQQSGS--KERGDGWLE 259 Query: 649 IELGEFYNDQGEDGEVKMTLEEVKAGNWRTGLIVEGIEVRPK 774 +ELGEF+N G E++M++ EVK G W+ GLIV+GIE+RPK Sbjct: 260 VELGEFFNRDGNGEELEMSVLEVKGGKWKGGLIVQGIEIRPK 301