BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002722
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   269   6e-70
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   257   3e-66
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              256   6e-66
ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...   253   5e-65
ref|XP_002513764.1| conserved hypothetical protein [Ricinus comm...   249   7e-64

>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score =  269 bits (688), Expect = 6e-70
 Identities = 141/274 (51%), Positives = 182/274 (66%), Gaps = 17/274 (6%)
 Frame = +1

Query: 4   PLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGSVSDLNLSDFKSKKELYFRLCD 183
           P D C LS+VSS+FKSA +SD +WE+FLP +Y+ I+  S S + LS   SKKELY RLC+
Sbjct: 20  PRDACRLSIVSSLFKSAGESDAVWERFLPRDYQSIIFTSDSYVLLSSLSSKKELYLRLCE 79

Query: 184 DPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVCL 363
            PII++ G KSF L K++GKKC+ML A++L I WGDTP +W W S   SRF EVA L+ +
Sbjct: 80  KPIIIDDGKKSFSLVKKSGKKCYMLSARDLMIVWGDTPTYWRWNSDSSSRFGEVAELIGV 139

Query: 364 CVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTVY 543
           C L+I G+I+  MLSP T YAAYLVFK  + +YGLD    E  V  V   GS +G R VY
Sbjct: 140 CWLEICGKINATMLSPATLYAAYLVFKPKEGAYGLDYQPVEVGVGLV---GSENGKRNVY 196

Query: 544 LDPEFNRAP--HRPRRRSSV---------------TQYVGQLPSARGDRWMEIELGEFYN 672
           LD +  RA   H  RRR  +               ++  GQ P  RGD W+EIELGEF+ 
Sbjct: 197 LDSQRGRAHRYHLVRRRIGLHNRSRIVGMQEPVPASENNGQHPKERGDGWLEIELGEFFC 256

Query: 673 DQGEDGEVKMTLEEVKAGNWRTGLIVEGIEVRPK 774
            +GEDGE++M ++EVK+G+W+ GL VEGIE+RPK
Sbjct: 257 KEGEDGELEMRVQEVKSGDWKGGLTVEGIEIRPK 290


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  257 bits (656), Expect = 3e-66
 Identities = 136/275 (49%), Positives = 175/275 (63%), Gaps = 18/275 (6%)
 Frame = +1

Query: 4   PLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGS-VSDLNLSDFKSKKELYFRLC 180
           P D C LS+V S+FK+A +SD +WE+FLP +Y+ I+S S  S + L+   SKK LY  LC
Sbjct: 30  PRDACRLSMVCSLFKAAEESDFVWERFLPRDYQSIISKSDASSMLLASASSKKHLYLMLC 89

Query: 181 DDPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVC 360
           + P+I+EGG KS  LEK++GKKC+ML A++L I WGDTP +W+W S P SRF EVA L+ 
Sbjct: 90  EKPLIIEGGKKSISLEKKSGKKCYMLSARDLIIVWGDTPTYWKWNSDPSSRFGEVAELIS 149

Query: 361 LCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTV 540
           +C L+I G+I+  MLSP T Y AYLVF+ T   YGLD    E  V  V   GS  G R V
Sbjct: 150 VCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYGLDYQPVEVGVGLV---GSECGMRNV 206

Query: 541 YLDPEFNRAP--HRPRRR---------------SSVTQYVGQLPSARGDRWMEIELGEFY 669
           YLD E  R    H   RR                   +  GQ P  R D W+EIELGEF+
Sbjct: 207 YLDSERGRRQQYHFVSRRIGLFNRCRIVGMPASEPARENNGQYPKKREDGWLEIELGEFF 266

Query: 670 NDQGEDGEVKMTLEEVKAGNWRTGLIVEGIEVRPK 774
             +GED E++M+++EVK G+W+ GLIVEGIE+RPK
Sbjct: 267 CKEGEDRELEMSVQEVKGGDWKGGLIVEGIEIRPK 301


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  256 bits (654), Expect = 6e-66
 Identities = 133/263 (50%), Positives = 178/263 (67%), Gaps = 3/263 (1%)
 Frame = +1

Query: 1   SPLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGSVSDLNLSDFKSKKELYFRLC 180
           SP DVC +S V+S+F SAA+SD +WE+FLP++Y+EI++ S    +   F SKKELYF LC
Sbjct: 36  SPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESSSWRHFSSKKELYFTLC 95

Query: 181 DDPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVC 360
           D P++++ G KSF LEKR+GKKC+ML ++EL I WGDTP +WEW S P+SRF EVA L  
Sbjct: 96  DYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEWTSLPESRFPEVAYLQA 155

Query: 361 LCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTV 540
           +C  +I G+I+T MLSP T YAAYLVF    +S+G ++   E S++ V   G+ +  R +
Sbjct: 156 VCWFEIRGKINTCMLSPRTNYAAYLVFH-AGRSHGFEDVPVESSIEIV---GNETTTRVI 211

Query: 541 YLDPEFNRAPHRPRRRSSVTQYVGQ---LPSARGDRWMEIELGEFYNDQGEDGEVKMTLE 711
           YL         R R+    T  +      P  R D W EIELGEF+ + GED E+++TL 
Sbjct: 212 YL--------ARYRKNEEPTSSIRSDLPYPKKREDSWFEIELGEFFIEGGEDTELEITLM 263

Query: 712 EVKAGNWRTGLIVEGIEVRPKRD 780
           EVKAG+W+ GLIVEGIE+RPK D
Sbjct: 264 EVKAGHWKDGLIVEGIEIRPKGD 286


>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
           gi|223546849|gb|EEF48346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  253 bits (646), Expect = 5e-65
 Identities = 133/280 (47%), Positives = 171/280 (61%), Gaps = 21/280 (7%)
 Frame = +1

Query: 4   PLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGSVSDLNLSDFKSKKELYFRLCD 183
           P D C LS VSS F+ AA+SD +WEKFLP +Y  I+S S     L  F SKK+LYF LCD
Sbjct: 29  PFDACRLSTVSSTFRDAANSDTVWEKFLPQDYHSIISRSSDSFLLDRFSSKKQLYFSLCD 88

Query: 184 DPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVCL 363
           +PI+++ G KSF LEK +GKKC+ML A++L I W DTP +W W   PDSRF EVA L+ +
Sbjct: 89  NPILIDDGKKSFALEKWSGKKCYMLSARDLKIVWSDTPTYWRWICLPDSRFPEVAELISV 148

Query: 364 CVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTVY 543
           C L+I  +I+  MLSP+T Y AY VFK T  +YG +    E  V  V   GS +    VY
Sbjct: 149 CWLEISARINISMLSPSTLYTAYFVFKSTTGAYGFEYQPAEAVVGLV---GSETCKHNVY 205

Query: 544 LDPEFNRAPHRPRRRSSVTQYVGQL---------------------PSARGDRWMEIELG 660
           LD E  R     RR   V + +G L                     P  RGD W+EIELG
Sbjct: 206 LDAERGRR----RRSQIVRRRIGLLNRGRIFGLQASLRNGESDCKYPKERGDGWLEIELG 261

Query: 661 EFYNDQGEDGEVKMTLEEVKAGNWRTGLIVEGIEVRPKRD 780
           EF+  +GEDGE+++++ EVK G+W+ GL V+GIE+RPK D
Sbjct: 262 EFFKKKGEDGELELSVLEVKGGHWKGGLAVQGIEIRPKVD 301


>ref|XP_002513764.1| conserved hypothetical protein [Ricinus communis]
           gi|223546850|gb|EEF48347.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score =  249 bits (636), Expect = 7e-64
 Identities = 131/282 (46%), Positives = 171/282 (60%), Gaps = 24/282 (8%)
 Frame = +1

Query: 1   SPLDVCVLSLVSSMFKSAADSDVIWEKFLPSNYKEIVSGSVSDLNLSDFKSKKELYFRLC 180
           +P D C LS VSS FK+A+ SD +WE FLP +Y  I+S S     LS   SKK L+  LC
Sbjct: 24  TPRDACNLSTVSSKFKNASLSDTVWESFLPQDYNSIISQSSHPSLLSSCSSKKHLFLSLC 83

Query: 181 DDPIILEGGTKSFQLEKRNGKKCFMLGAKELGIAWGDTPQHWEWKSQPDSRFAEVAGLVC 360
             PII++ G KSF L+KRNGKKC+ML A++L I+WG TP +W W S PDSRF EVA L+ 
Sbjct: 84  QKPIIIDNGKKSFSLDKRNGKKCYMLSARDLKISWGGTPTYWRWISDPDSRFGEVAELIS 143

Query: 361 LCVLKIDGQIDTEMLSPNTTYAAYLVFKVTDKSYGLDNPTTEGSVQFVLGGGSASGYRTV 540
           +C L+I G I T +LSP+T Y+AYLVFK+ +++YGL +P  E  V+   G GS    R +
Sbjct: 144 VCWLEISGTISTSLLSPSTMYSAYLVFKLNERAYGLHDPPVEAIVR--AGDGSEINKRII 201

Query: 541 YLDPEFN-----------RAPH-------------RPRRRSSVTQYVGQLPSARGDRWME 648
           YLD + N           R  H              P    +  Q  G     RGD W+E
Sbjct: 202 YLDADTNLRGVRQEPLLLRTRHGLFGPSDIAEESETPEHSGNDGQQSGS--KERGDGWLE 259

Query: 649 IELGEFYNDQGEDGEVKMTLEEVKAGNWRTGLIVEGIEVRPK 774
           +ELGEF+N  G   E++M++ EVK G W+ GLIV+GIE+RPK
Sbjct: 260 VELGEFFNRDGNGEELEMSVLEVKGGKWKGGLIVQGIEIRPK 301