BLASTX nr result

ID: Coptis21_contig00002717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002717
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633146.1| PREDICTED: uncharacterized protein LOC100852...   173   8e-41
ref|XP_002331008.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40
ref|XP_002285428.1| PREDICTED: uncharacterized protein LOC100266...   164   3e-38
emb|CAN72752.1| hypothetical protein VITISV_030561 [Vitis vinifera]   164   3e-38
ref|XP_002271365.1| PREDICTED: uncharacterized protein LOC100242...   160   5e-37

>ref|XP_003633146.1| PREDICTED: uncharacterized protein LOC100852953 [Vitis vinifera]
          Length = 201

 Score =  173 bits (438), Expect = 8e-41
 Identities = 97/145 (66%), Positives = 108/145 (74%), Gaps = 2/145 (1%)
 Frame = +3

Query: 342 SRVNMCGTTRSSSPSVRFXXXXXXXXXXXXXXXXXXXNQIVKKQNNPLS--STPQKRTCM 515
           ++VN+ G+   SSPSVRF                    Q+VKK  NPLS  STP KR+CM
Sbjct: 57  TKVNLYGSA-PSSPSVRFSLDRPISPSRSISATPR--TQVVKKHTNPLSAPSTP-KRSCM 112

Query: 516 CSPTNHPGSFRCSLHKNMSFSNSHYSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAALI 695
           CSPT HPGSFRCSLHK  +  ++ YSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAALI
Sbjct: 113 CSPTTHPGSFRCSLHKGFNNHSAPYSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAALI 172

Query: 696 RPSSHHQRRRAAFQPRPSRLSSMSK 770
           RPSSH QRRR+ FQPRPSRLS+MSK
Sbjct: 173 RPSSHQQRRRSGFQPRPSRLSNMSK 197


>ref|XP_002331008.1| predicted protein [Populus trichocarpa] gi|222872938|gb|EEF10069.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  172 bits (436), Expect = 1e-40
 Identities = 98/151 (64%), Positives = 110/151 (72%), Gaps = 7/151 (4%)
 Frame = +3

Query: 339 PSRVNMCG-TTRSSSPSVRFXXXXXXXXXXXXXXXXXXXNQIVKKQNNPLSSTPQKRTCM 515
           P+RVNM G T++SSSPSVR                    +Q+VKKQ+ P      KRTCM
Sbjct: 65  PTRVNMYGHTSQSSSPSVRLNAISPNRSISTVNPSRSHHHQVVKKQSTP------KRTCM 118

Query: 516 CSPTNHPGSFRCSLHKNMSF----SNSHYSSN--RLNARRSAMTNSLVRIGTVEGDLVKR 677
           CSPT HPGSFRCSLHK + F    S+S+YSSN  RLNARRSAMTNSLVRIG VEGDLV+R
Sbjct: 119 CSPTTHPGSFRCSLHKGVGFGGSPSSSNYSSNNNRLNARRSAMTNSLVRIGGVEGDLVRR 178

Query: 678 ALAALIRPSSHHQRRRAAFQPRPSRLSSMSK 770
           ALA+LIRPSSH QRRR+AFQPRPSRLS MSK
Sbjct: 179 ALASLIRPSSHQQRRRSAFQPRPSRLSVMSK 209


>ref|XP_002285428.1| PREDICTED: uncharacterized protein LOC100266438 [Vitis vinifera]
          Length = 207

 Score =  164 bits (416), Expect = 3e-38
 Identities = 99/147 (67%), Positives = 109/147 (74%), Gaps = 3/147 (2%)
 Frame = +3

Query: 339 PSRVNMCGTTRSSSPSVRFXXXXXXXXXXXXXXXXXXXNQIVKKQNNPLSSTPQKRTCMC 518
           P+RVN+ G+T  +S SVRF                   +QIV+K      STP+KR CMC
Sbjct: 68  PTRVNLYGSTPLAS-SVRFSIDRSISPSRSIAVPRR--DQIVRK------STPKKR-CMC 117

Query: 519 SPTNHPGSFRCSLHKNMSFSNSH---YSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAA 689
           SPT HPGSFRCSLHKN + ++SH   YSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAA
Sbjct: 118 SPTTHPGSFRCSLHKNFN-NSSHTISYSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAA 176

Query: 690 LIRPSSHHQRRRAAFQPRPSRLSSMSK 770
           LIRPSSH QRRRAAFQPRPSRLS MSK
Sbjct: 177 LIRPSSHQQRRRAAFQPRPSRLSIMSK 203


>emb|CAN72752.1| hypothetical protein VITISV_030561 [Vitis vinifera]
          Length = 269

 Score =  164 bits (416), Expect = 3e-38
 Identities = 99/147 (67%), Positives = 109/147 (74%), Gaps = 3/147 (2%)
 Frame = +3

Query: 339 PSRVNMCGTTRSSSPSVRFXXXXXXXXXXXXXXXXXXXNQIVKKQNNPLSSTPQKRTCMC 518
           P+RVN+ G+T  +S SVRF                   +QIV+K      STP+KR CMC
Sbjct: 68  PTRVNLYGSTPLAS-SVRFSIDRSISPSRSIAVPRR--DQIVRK------STPKKR-CMC 117

Query: 519 SPTNHPGSFRCSLHKNMSFSNSH---YSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAA 689
           SPT HPGSFRCSLHKN + ++SH   YSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAA
Sbjct: 118 SPTTHPGSFRCSLHKNFN-NSSHTISYSSNRLNARRSAMTNSLVRIGTVEGDLVKRALAA 176

Query: 690 LIRPSSHHQRRRAAFQPRPSRLSSMSK 770
           LIRPSSH QRRRAAFQPRPSRLS MSK
Sbjct: 177 LIRPSSHQQRRRAAFQPRPSRLSIMSK 203


>ref|XP_002271365.1| PREDICTED: uncharacterized protein LOC100242170 [Vitis vinifera]
          Length = 203

 Score =  160 bits (405), Expect = 5e-37
 Identities = 93/149 (62%), Positives = 104/149 (69%), Gaps = 6/149 (4%)
 Frame = +3

Query: 339 PSRVNMC-GTTRSSSPSVRFXXXXXXXXXXXXXXXXXXXNQIVKKQNNPLSSTPQKRTCM 515
           P+RVN+  G + S SPSVRF                   +Q+V+KQN    S+ QKRTC+
Sbjct: 52  PTRVNLYRGVSSSPSPSVRFSIEPQTSPRRSISVSPR--DQVVRKQNT--GSSRQKRTCL 107

Query: 516 CSPTNHPGSFRCSLHKNM-----SFSNSHYSSNRLNARRSAMTNSLVRIGTVEGDLVKRA 680
           CSPT HPGSFRCS+HKN      S S   Y SNRLNARRSAMTNSLVRIG VEGDLVKRA
Sbjct: 108 CSPTTHPGSFRCSMHKNANTGAGSGSGGAYQSNRLNARRSAMTNSLVRIGGVEGDLVKRA 167

Query: 681 LAALIRPSSHHQRRRAAFQPRPSRLSSMS 767
           L+ALIRPSSH QRRRAAF+PR SRLS MS
Sbjct: 168 LSALIRPSSHQQRRRAAFEPRLSRLSIMS 196


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