BLASTX nr result

ID: Coptis21_contig00002707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002707
         (1599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU23086.1| unknown [Glycine max]                                  279   2e-72
ref|NP_001240959.1| uncharacterized protein LOC100806792 [Glycin...   279   2e-72
ref|XP_002282933.1| PREDICTED: thylakoid lumenal 15 kDa protein ...   277   5e-72
ref|NP_001236746.1| uncharacterized protein LOC100500352 [Glycin...   277   7e-72
emb|CAN74472.1| hypothetical protein VITISV_013914 [Vitis vinifera]   275   3e-71

>gb|ACU23086.1| unknown [Glycine max]
          Length = 222

 Score =  279 bits (713), Expect = 2e-72
 Identities = 150/210 (71%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
 Frame = -3

Query: 1150 SKPH---QPSSFQCTCSHLPLPLVYPTHKEN---SPVLQFPLHXXXXXXXXXXXXXXXXX 989
            SKPH     S+     S LPLP++    K++   S  L F L                  
Sbjct: 13   SKPHLSLSTSNPNKASSTLPLPILGLKTKQSLQPSQKLTFSLGESVAGATLVALLSASFI 72

Query: 988  FVDPSLAFKGGGPYGSEVTRGQDLTGKDFSGKTLIRQDFKTSILRQTNFKGAKLLGASFF 809
            FVDP+LAFKGGGPYG EVTRGQDLTGKDFSGKTLI+QDFKTSILRQ NFKGAKL+GASFF
Sbjct: 73   FVDPALAFKGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFF 132

Query: 808  DADLTGADLSDADLRGADFSLANVTKVNLSNANLEGALTTGNTSFKGSVINGADFTDVPL 629
            DADLTGADLSDADLR ADFSLANVTK NLSNANLEGAL TGNTSF+GS + GADFTDVPL
Sbjct: 133  DADLTGADLSDADLRNADFSLANVTKANLSNANLEGALVTGNTSFRGSNVTGADFTDVPL 192

Query: 628  REDQKGYLCKVADGVNPTTGNATRDTLLCN 539
            REDQ+ YLCKVADGVNPTTGNATRDTL CN
Sbjct: 193  REDQREYLCKVADGVNPTTGNATRDTLFCN 222


>ref|NP_001240959.1| uncharacterized protein LOC100806792 [Glycine max]
            gi|255626639|gb|ACU13664.1| unknown [Glycine max]
          Length = 222

 Score =  279 bits (713), Expect = 2e-72
 Identities = 150/210 (71%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
 Frame = -3

Query: 1150 SKPH---QPSSFQCTCSHLPLPLVYPTHKEN---SPVLQFPLHXXXXXXXXXXXXXXXXX 989
            SKPH     S+     S LPLP++    K++   S  L F L                  
Sbjct: 13   SKPHLSLSTSNPNKASSTLPLPILGLKTKQSLQPSQKLTFSLGESVAGATLVALLSASFI 72

Query: 988  FVDPSLAFKGGGPYGSEVTRGQDLTGKDFSGKTLIRQDFKTSILRQTNFKGAKLLGASFF 809
            FVDP+LAFKGGGPYG EVTRGQDLTGKDFSGKTLI+QDFKTSILRQ NFKGAKL+GASFF
Sbjct: 73   FVDPALAFKGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLIGASFF 132

Query: 808  DADLTGADLSDADLRGADFSLANVTKVNLSNANLEGALTTGNTSFKGSVINGADFTDVPL 629
            DADLTGADLSDADLR ADFSLANVTK NLSNANLEGAL TGNTSF+GS + GADFTDVPL
Sbjct: 133  DADLTGADLSDADLRNADFSLANVTKANLSNANLEGALATGNTSFRGSNVTGADFTDVPL 192

Query: 628  REDQKGYLCKVADGVNPTTGNATRDTLLCN 539
            REDQ+ YLCKVADGVNPTTGNATRDTL CN
Sbjct: 193  REDQREYLCKVADGVNPTTGNATRDTLFCN 222


>ref|XP_002282933.1| PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic [Vitis
           vinifera] gi|296086195|emb|CBI31636.3| unnamed protein
           product [Vitis vinifera]
          Length = 221

 Score =  277 bits (709), Expect = 5e-72
 Identities = 135/149 (90%), Positives = 143/149 (95%)
 Frame = -3

Query: 985 VDPSLAFKGGGPYGSEVTRGQDLTGKDFSGKTLIRQDFKTSILRQTNFKGAKLLGASFFD 806
           VDP+LAFKGGGPYG+EVTRGQDLTGKDFSGK+LI+QDFKTSILRQ NFKGA LLGASFFD
Sbjct: 73  VDPALAFKGGGPYGAEVTRGQDLTGKDFSGKSLIKQDFKTSILRQANFKGANLLGASFFD 132

Query: 805 ADLTGADLSDADLRGADFSLANVTKVNLSNANLEGALTTGNTSFKGSVINGADFTDVPLR 626
           ADLTGADLSDADLRGADFSLANVTK NLSNANLEGAL TGNTSF+GS+I GADFTDVPLR
Sbjct: 133 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIITGADFTDVPLR 192

Query: 625 EDQKGYLCKVADGVNPTTGNATRDTLLCN 539
           EDQ+ YLCKVADGVNPTTGNATR+TLLCN
Sbjct: 193 EDQREYLCKVADGVNPTTGNATRETLLCN 221


>ref|NP_001236746.1| uncharacterized protein LOC100500352 [Glycine max]
            gi|255630103|gb|ACU15405.1| unknown [Glycine max]
          Length = 224

 Score =  277 bits (708), Expect = 7e-72
 Identities = 157/230 (68%), Positives = 169/230 (73%), Gaps = 3/230 (1%)
 Frame = -3

Query: 1219 MALVNVSPFFSSTKITPNHAALYSKPHQPSSFQCTCSHLPLPLVYPTHKEN---SPVLQF 1049
            MALV      S+ K  P+ +   S P++ SS       LPLPL+    K++   S  L F
Sbjct: 1    MALVLNVSLCSTCK--PHLSLSTSNPNKASS----TFPLPLPLLGLNIKKSLQPSQKLTF 54

Query: 1048 PLHXXXXXXXXXXXXXXXXXFVDPSLAFKGGGPYGSEVTRGQDLTGKDFSGKTLIRQDFK 869
             L                  FVDP+LAFKGGGPYG EVTRGQDLTGKDFSGKTLI+QDFK
Sbjct: 55   SLGESVSGATLVALLSASFIFVDPALAFKGGGPYGQEVTRGQDLTGKDFSGKTLIKQDFK 114

Query: 868  TSILRQTNFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKVNLSNANLEGALTT 689
            TSILRQ NFKGAKL+GASFFDADLTGADLSDADLR ADFSLANVTK NLSNANLEGAL T
Sbjct: 115  TSILRQANFKGAKLIGASFFDADLTGADLSDADLRNADFSLANVTKANLSNANLEGALAT 174

Query: 688  GNTSFKGSVINGADFTDVPLREDQKGYLCKVADGVNPTTGNATRDTLLCN 539
            GNTSFKGS I GADFTDVPLREDQ+ YLCKVADGVNPTTGNATRD L CN
Sbjct: 175  GNTSFKGSNITGADFTDVPLREDQREYLCKVADGVNPTTGNATRDALFCN 224


>emb|CAN74472.1| hypothetical protein VITISV_013914 [Vitis vinifera]
          Length = 221

 Score =  275 bits (702), Expect = 3e-71
 Identities = 134/149 (89%), Positives = 142/149 (95%)
 Frame = -3

Query: 985 VDPSLAFKGGGPYGSEVTRGQDLTGKDFSGKTLIRQDFKTSILRQTNFKGAKLLGASFFD 806
           VDP+LAFKGGGPYG+EVTRGQDLTGKDFSGK+LI+QDFKTSILRQ NFK A LLGASFFD
Sbjct: 73  VDPALAFKGGGPYGAEVTRGQDLTGKDFSGKSLIKQDFKTSILRQANFKXANLLGASFFD 132

Query: 805 ADLTGADLSDADLRGADFSLANVTKVNLSNANLEGALTTGNTSFKGSVINGADFTDVPLR 626
           ADLTGADLSDADLRGADFSLANVTK NLSNANLEGAL TGNTSF+GS+I GADFTDVPLR
Sbjct: 133 ADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSIITGADFTDVPLR 192

Query: 625 EDQKGYLCKVADGVNPTTGNATRDTLLCN 539
           EDQ+ YLCKVADGVNPTTGNATR+TLLCN
Sbjct: 193 EDQREYLCKVADGVNPTTGNATRETLLCN 221


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