BLASTX nr result
ID: Coptis21_contig00002706
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002706
(2220 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 476 e-131
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 474 e-131
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 474 e-131
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 469 e-129
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 469 e-129
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 476 bits (1225), Expect = e-131
Identities = 238/491 (48%), Positives = 312/491 (63%), Gaps = 6/491 (1%)
Frame = +2
Query: 764 STSKWKRGSKKPLRHVRCYNCKEKGHYLCDCXXXXXXXXXXXXL----ENEEVSEARLAS 931
S+S ++ SK R+ C CK GH + +C + EE +A + +
Sbjct: 128 SSSIYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVT 187
Query: 932 GIDGDDVSLSVSTQDDHMIDKWMLDSGCSYHMCSHRNWFATYENLSGGSVLMGNDVACKT 1111
D L D+W+LD+ C+YHMC +R+WFATYE + GG+VLMG+D C+
Sbjct: 188 DEKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEV 247
Query: 1112 VGIGTIRVKMHDGMVRTLTDVRHVPELKMNLISLGTLDSKGHKFEGNGGVLKIVSGSLVI 1291
GIGT+++KM DG +RTL DVRH+P LK +LISL TLD KG+K+ G G+LK+ GSLV+
Sbjct: 248 AGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVV 307
Query: 1292 MKGQ-RCGNLYTLLGSTVIGDVA-VGTCKDDSECTKKWHMRLGHMSEQGLSVLCKRGFLK 1465
MK + NLY L G+T++G+VA V +S+ T WHMRLGHMSE GL+ L KRG L
Sbjct: 308 MKADIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLD 367
Query: 1466 DLKKPSMGFCEHCAYGKQCRVKFSSSKHTTMGILDYVHTDVWGPSSVASKGGNWYCVSFI 1645
+ FCEHC +GK RVKF++S HTT GILDYVH+D+WGP+ S GG Y ++ +
Sbjct: 368 GQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIV 427
Query: 1646 DDHTRYVWVYMLKSKDEVFETFKQWKAMVENRTERKVKTLRSNNGTEYSCDAFQEFCAQH 1825
DD++R VW Y LK K + F+ FK+WK MVE +TERKVK LR++NG E F+ +C
Sbjct: 428 DDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSE 487
Query: 1826 DIARHWTVRDTPQHNGLAERMXXXXXXXXXXXXXXXXXGEEFWADALSMACYLYNRSPVP 2005
I RH+TV TPQ NG+AERM ++FWA+A+S ACYL NRSP
Sbjct: 488 GIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSY 547
Query: 2006 AIDCKTPYEVWSGEPADYSILRVFGSKAYYHMRESKLDPRAKKALFLGFASGVKGYRLWC 2185
AID KTP EVWSG PA+YS LRVFG AY H+ KL+PR K +FLG+ SGVKGY+LWC
Sbjct: 548 AIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWC 607
Query: 2186 LEDNKFLVSRD 2218
E K ++SR+
Sbjct: 608 PETKKVVISRN 618
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 474 bits (1220), Expect = e-131
Identities = 236/491 (48%), Positives = 313/491 (63%), Gaps = 6/491 (1%)
Frame = +2
Query: 764 STSKWKRGSKKPLRHVRCYNCKEKGHYLCDCXXXXXXXXXXXXL----ENEEVSEARLAS 931
S+S ++ SK R+ C CK GH + +C + EE +A + +
Sbjct: 426 SSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVT 485
Query: 932 GIDGDDVSLSVSTQDDHMIDKWMLDSGCSYHMCSHRNWFATYENLSGGSVLMGNDVACKT 1111
D L D+W+L++ C YHMC +R+WFATYE + G+VLMG+D C+
Sbjct: 486 DEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEV 545
Query: 1112 VGIGTIRVKMHDGMVRTLTDVRHVPELKMNLISLGTLDSKGHKFEGNGGVLKIVSGSLVI 1291
GIGT+++KM DG +RTL+DVRH+P LK +LISL TLD KG+K+ G G+LK+ GSLV+
Sbjct: 546 AGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVV 605
Query: 1292 MKGQ-RCGNLYTLLGSTVIGDVA-VGTCKDDSECTKKWHMRLGHMSEQGLSVLCKRGFLK 1465
MK + NLY L G+T++G+VA V +S+ T WHMRLGHM+E GL+ L KRG L
Sbjct: 606 MKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLD 665
Query: 1466 DLKKPSMGFCEHCAYGKQCRVKFSSSKHTTMGILDYVHTDVWGPSSVASKGGNWYCVSFI 1645
+ FCEHC +GK RVKF++S HTT GILDYVH+D+WGP+ S GG Y ++ +
Sbjct: 666 GQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIV 725
Query: 1646 DDHTRYVWVYMLKSKDEVFETFKQWKAMVENRTERKVKTLRSNNGTEYSCDAFQEFCAQH 1825
DD++R VW Y LK K + F+ FK+WK MVE +TERKVK LR++NG E+ F+ +C
Sbjct: 726 DDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSE 785
Query: 1826 DIARHWTVRDTPQHNGLAERMXXXXXXXXXXXXXXXXXGEEFWADALSMACYLYNRSPVP 2005
I RH+TV TPQ NG+AERM ++FWA+A+S ACYL NRSP
Sbjct: 786 GIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSY 845
Query: 2006 AIDCKTPYEVWSGEPADYSILRVFGSKAYYHMRESKLDPRAKKALFLGFASGVKGYRLWC 2185
AID KTP EVWSG PA+YS LRVFG AY H+ KL+PRA K +FLG+ SGVKGY+LWC
Sbjct: 846 AIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 905
Query: 2186 LEDNKFLVSRD 2218
E K ++SR+
Sbjct: 906 PETKKVVISRN 916
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 474 bits (1220), Expect = e-131
Identities = 236/491 (48%), Positives = 313/491 (63%), Gaps = 6/491 (1%)
Frame = +2
Query: 764 STSKWKRGSKKPLRHVRCYNCKEKGHYLCDCXXXXXXXXXXXXL----ENEEVSEARLAS 931
S+S ++ SK R+ C CK GH + +C + EE +A + +
Sbjct: 219 SSSSYRGRSKSRGRYKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVT 278
Query: 932 GIDGDDVSLSVSTQDDHMIDKWMLDSGCSYHMCSHRNWFATYENLSGGSVLMGNDVACKT 1111
D L D+W+L++ C YHMC +R+WFATYE + G+VLMG+D C+
Sbjct: 279 DEKSDAELLVAYAGCAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEV 338
Query: 1112 VGIGTIRVKMHDGMVRTLTDVRHVPELKMNLISLGTLDSKGHKFEGNGGVLKIVSGSLVI 1291
GIGT+++KM DG +RTL+DVRH+P LK +LISL TLD KG+K+ G G+LK+ GSLV+
Sbjct: 339 AGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVV 398
Query: 1292 MKGQ-RCGNLYTLLGSTVIGDVA-VGTCKDDSECTKKWHMRLGHMSEQGLSVLCKRGFLK 1465
MK + NLY L G+T++G+VA V +S+ T WHMRLGHM+E GL+ L KRG L
Sbjct: 399 MKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLD 458
Query: 1466 DLKKPSMGFCEHCAYGKQCRVKFSSSKHTTMGILDYVHTDVWGPSSVASKGGNWYCVSFI 1645
+ FCEHC +GK RVKF++S HTT GILDYVH+D+WGP+ S GG Y ++ +
Sbjct: 459 GQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFGGTRYMMTIV 518
Query: 1646 DDHTRYVWVYMLKSKDEVFETFKQWKAMVENRTERKVKTLRSNNGTEYSCDAFQEFCAQH 1825
DD++R VW Y LK K + F+ FK+WK MVE +TERKVK LR++NG E+ F+ +C
Sbjct: 519 DDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSE 578
Query: 1826 DIARHWTVRDTPQHNGLAERMXXXXXXXXXXXXXXXXXGEEFWADALSMACYLYNRSPVP 2005
I RH+TV TPQ NG+AERM ++FWA+A+S ACYL NRSP
Sbjct: 579 GIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSY 638
Query: 2006 AIDCKTPYEVWSGEPADYSILRVFGSKAYYHMRESKLDPRAKKALFLGFASGVKGYRLWC 2185
AID KTP EVWSG PA+YS LRVFG AY H+ KL+PRA K +FLG+ SGVKGY+LWC
Sbjct: 639 AIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 698
Query: 2186 LEDNKFLVSRD 2218
E K ++SR+
Sbjct: 699 PETKKVVISRN 709
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 469 bits (1207), Expect = e-129
Identities = 234/491 (47%), Positives = 310/491 (63%), Gaps = 6/491 (1%)
Frame = +2
Query: 764 STSKWKRGSKKPLRHVRCYNCKEKGHYLCDCXXXXXXXXXXXXL----ENEEVSEARLAS 931
S+S ++ SK R+ C CK GH + +C + EE +A + +
Sbjct: 254 SSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVT 313
Query: 932 GIDGDDVSLSVSTQDDHMIDKWMLDSGCSYHMCSHRNWFATYENLSGGSVLMGNDVACKT 1111
D L D+W+LD+ +YHMC +R+WFATYE L GG+VLMG+D C+
Sbjct: 314 DEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEV 373
Query: 1112 VGIGTIRVKMHDGMVRTLTDVRHVPELKMNLISLGTLDSKGHKFEGNGGVLKIVSGSLVI 1291
GIGT+++KM DG +RTL+DVRH+P LK +LISL TLD KG+K+ G G+LK+ GSLV+
Sbjct: 374 AGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVV 433
Query: 1292 MKGQ-RCGNLYTLLGSTVIGDVA-VGTCKDDSECTKKWHMRLGHMSEQGLSVLCKRGFLK 1465
MK + NLY L G+T++G+VA V +S+ T WHMRLGHMSE GL+ L KR L
Sbjct: 434 MKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLD 493
Query: 1466 DLKKPSMGFCEHCAYGKQCRVKFSSSKHTTMGILDYVHTDVWGPSSVASKGGNWYCVSFI 1645
+ FCEHC +GK RVKF++S HTT GILDYVH+D+WGP+ S GG Y ++ +
Sbjct: 494 GQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIV 553
Query: 1646 DDHTRYVWVYMLKSKDEVFETFKQWKAMVENRTERKVKTLRSNNGTEYSCDAFQEFCAQH 1825
DD++R VW Y LK K + F+ FK+WK MVE +TE+KVK LR++NG E+ F+ +C
Sbjct: 554 DDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSE 613
Query: 1826 DIARHWTVRDTPQHNGLAERMXXXXXXXXXXXXXXXXXGEEFWADALSMACYLYNRSPVP 2005
I H+TV TPQ NG+AERM ++FWA+A+S CYL NRSP
Sbjct: 614 GIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSY 673
Query: 2006 AIDCKTPYEVWSGEPADYSILRVFGSKAYYHMRESKLDPRAKKALFLGFASGVKGYRLWC 2185
A D KTP EVWSG PA+YS LRVFG AY H+ KL+PRA K +FLG+ SGVKGY+LWC
Sbjct: 674 ATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 733
Query: 2186 LEDNKFLVSRD 2218
E K ++SR+
Sbjct: 734 PETKKVVISRN 744
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 469 bits (1207), Expect = e-129
Identities = 234/491 (47%), Positives = 310/491 (63%), Gaps = 6/491 (1%)
Frame = +2
Query: 764 STSKWKRGSKKPLRHVRCYNCKEKGHYLCDCXXXXXXXXXXXXL----ENEEVSEARLAS 931
S+S ++ SK R+ C CK GH + +C + EE +A + +
Sbjct: 254 SSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVT 313
Query: 932 GIDGDDVSLSVSTQDDHMIDKWMLDSGCSYHMCSHRNWFATYENLSGGSVLMGNDVACKT 1111
D L D+W+LD+ +YHMC +R+WFATYE L GG+VLMG+D C+
Sbjct: 314 DEKSDTELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEV 373
Query: 1112 VGIGTIRVKMHDGMVRTLTDVRHVPELKMNLISLGTLDSKGHKFEGNGGVLKIVSGSLVI 1291
GIGT+++KM DG +RTL+DVRH+P LK +LISL TLD KG+K+ G G+LK+ GSLV+
Sbjct: 374 AGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVV 433
Query: 1292 MKGQ-RCGNLYTLLGSTVIGDVA-VGTCKDDSECTKKWHMRLGHMSEQGLSVLCKRGFLK 1465
MK + NLY L G+T++G+VA V +S+ T WHMRLGHMSE GL+ L KR L
Sbjct: 434 MKADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLD 493
Query: 1466 DLKKPSMGFCEHCAYGKQCRVKFSSSKHTTMGILDYVHTDVWGPSSVASKGGNWYCVSFI 1645
+ FCEHC +GK RVKF++S HTT GILDYVH+D+WGP+ S GG Y ++ +
Sbjct: 494 GQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPACKTSFGGARYMMTIV 553
Query: 1646 DDHTRYVWVYMLKSKDEVFETFKQWKAMVENRTERKVKTLRSNNGTEYSCDAFQEFCAQH 1825
DD++R VW Y LK K + F+ FK+WK MVE +TE+KVK LR++NG E+ F+ +C
Sbjct: 554 DDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSE 613
Query: 1826 DIARHWTVRDTPQHNGLAERMXXXXXXXXXXXXXXXXXGEEFWADALSMACYLYNRSPVP 2005
I H+TV TPQ NG+AERM ++FWA+A+S CYL NRSP
Sbjct: 614 GIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSY 673
Query: 2006 AIDCKTPYEVWSGEPADYSILRVFGSKAYYHMRESKLDPRAKKALFLGFASGVKGYRLWC 2185
A D KTP EVWSG PA+YS LRVFG AY H+ KL+PRA K +FLG+ SGVKGY+LWC
Sbjct: 674 ATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWC 733
Query: 2186 LEDNKFLVSRD 2218
E K ++SR+
Sbjct: 734 PETKKVVISRN 744