BLASTX nr result

ID: Coptis21_contig00002703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002703
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36072.1| unknown [Lotus japonicus]                               89   4e-16
ref|XP_003537804.1| PREDICTED: actin-depolymerizing factor 5-lik...    89   4e-16
ref|XP_004147035.1| PREDICTED: actin-depolymerizing factor 5-lik...    88   6e-16
ref|XP_004147034.1| PREDICTED: actin-depolymerizing factor 5-lik...    88   6e-16
ref|XP_003526978.1| PREDICTED: actin-depolymerizing factor 5-lik...    87   1e-15

>gb|AFK36072.1| unknown [Lotus japonicus]
          Length = 173

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -3

Query: 491 APTASRIRAKILYATSKDGLRRVLDGISYEVQATDPTEMGIEVIRDRAK 345
           +PTASRIRAKILYATSKDGLRR LDGISYE+QATDPTEMG +VI+DRAK
Sbjct: 125 SPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIQDRAK 173


>ref|XP_003537804.1| PREDICTED: actin-depolymerizing factor 5-like [Glycine max]
          Length = 132

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -3

Query: 491 APTASRIRAKILYATSKDGLRRVLDGISYEVQATDPTEMGIEVIRDRAK 345
           +PTASRIRAK+LYATSKDGLRR LDGISYEVQATDPTEMG +VI+DRAK
Sbjct: 84  SPTASRIRAKMLYATSKDGLRRALDGISYEVQATDPTEMGFDVIQDRAK 132


>ref|XP_004147035.1| PREDICTED: actin-depolymerizing factor 5-like isoform 2 [Cucumis
           sativus]
          Length = 143

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -3

Query: 491 APTASRIRAKILYATSKDGLRRVLDGISYEVQATDPTEMGIEVIRDRAK 345
           +PT SRIRAKILYATSKDGLRRVL+GI YEVQATDPTEMGI+VI+DRAK
Sbjct: 95  SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK 143


>ref|XP_004147034.1| PREDICTED: actin-depolymerizing factor 5-like isoform 1 [Cucumis
           sativus]
          Length = 168

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -3

Query: 491 APTASRIRAKILYATSKDGLRRVLDGISYEVQATDPTEMGIEVIRDRAK 345
           +PT SRIRAKILYATSKDGLRRVL+GI YEVQATDPTEMGI+VI+DRAK
Sbjct: 120 SPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK 168


>ref|XP_003526978.1| PREDICTED: actin-depolymerizing factor 5-like [Glycine max]
          Length = 143

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/49 (87%), Positives = 46/49 (93%)
 Frame = -3

Query: 491 APTASRIRAKILYATSKDGLRRVLDGISYEVQATDPTEMGIEVIRDRAK 345
           +PTASRIRAKILYATSKDGLRR LDGISYE+QATDPTEMG +VIRD AK
Sbjct: 95  SPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK 143


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