BLASTX nr result

ID: Coptis21_contig00002702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002702
         (1615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis...   300   6e-79
emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]   290   7e-76
ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [...   282   2e-73
emb|CBI34158.3| unnamed protein product [Vitis vinifera]              282   2e-73
ref|XP_002531293.1| conserved hypothetical protein [Ricinus comm...   276   1e-71

>ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
            gi|297737150|emb|CBI26351.3| unnamed protein product
            [Vitis vinifera]
          Length = 313

 Score =  300 bits (769), Expect = 6e-79
 Identities = 160/239 (66%), Positives = 172/239 (71%)
 Frame = -3

Query: 1601 GSGKRFYDDHHDDDLNKASVNNERDSVHLTSLFPAFGHVQTQSLRPAAPQAHQPFHGHPT 1422
            GSG+RF DD    D   +S  +ER+SVHL  LFPA+GHVQ+ S+RPA PQ HQ FHG PT
Sbjct: 78   GSGERFRDDV---DARGSSGRSERESVHLDGLFPAYGHVQSLSVRPAVPQVHQAFHGQPT 134

Query: 1421 PGAVAVVPHPPTIRPRVRARRGQATDPHSXXXXXXXXXXXXRMKALQELVPSSNKTDRAA 1242
            P  +   PHPP IRPRVRARRGQATDPHS            RMKALQELVPSSNKTDRAA
Sbjct: 135  PVPITAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAA 194

Query: 1241 MLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXXXXADIPLXXXXXXXXXXXSNHLAWEKWS 1062
            MLDEIVDYVKFLRLQVKVLSMSR           ADIPL           SN  AW+KWS
Sbjct: 195  MLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLPAVEGETGEGGSNQQAWDKWS 254

Query: 1061 TDGTEHEVAKLMEEDVGAAMQFLQSKALCIMPISLASAIYHNHQPDASTMIKPEPNGPT 885
             DGTE EVAKLMEEDVGAAMQFLQSKALCIMPISLA+AIY  HQ D  T+IKPEPN P+
Sbjct: 255  NDGTEREVAKLMEEDVGAAMQFLQSKALCIMPISLAAAIYPAHQTDTPTLIKPEPNAPS 313


>emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
          Length = 337

 Score =  290 bits (742), Expect = 7e-76
 Identities = 151/217 (69%), Positives = 160/217 (73%)
 Frame = -3

Query: 1535 ERDSVHLTSLFPAFGHVQTQSLRPAAPQAHQPFHGHPTPGAVAVVPHPPTIRPRVRARRG 1356
            ER+SVHL  LFPA+GHVQ+ S+RPA PQ HQ FHG PTP  +   PHPP IRPRVRARRG
Sbjct: 121  ERESVHLDGLFPAYGHVQSLSVRPAVPQVHQAFHGQPTPVPITAAPHPPAIRPRVRARRG 180

Query: 1355 QATDPHSXXXXXXXXXXXXRMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 1176
            QATDPHS            RMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMS
Sbjct: 181  QATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMS 240

Query: 1175 RXXXXXXXXXXXADIPLXXXXXXXXXXXSNHLAWEKWSTDGTEHEVAKLMEEDVGAAMQF 996
            R           ADIPL           SN  AW+KWS DGTE EVAKLMEEDVGAAMQF
Sbjct: 241  RLGGAGAVAQLVADIPLPAVEGETGEGGSNQQAWDKWSNDGTEREVAKLMEEDVGAAMQF 300

Query: 995  LQSKALCIMPISLASAIYHNHQPDASTMIKPEPNGPT 885
            LQSKALCIMPISLA+AIY  HQ D  T+IKPEPN P+
Sbjct: 301  LQSKALCIMPISLAAAIYPAHQTDTPTLIKPEPNAPS 337


>ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
          Length = 331

 Score =  282 bits (721), Expect = 2e-73
 Identities = 152/224 (67%), Positives = 164/224 (73%), Gaps = 7/224 (3%)
 Frame = -3

Query: 1535 ERDSVHLTSLFPAFGHVQTQSLRP-----AAPQAH--QPFHGHPTPGAVAVVPHPPTIRP 1377
            ER+SVHLT+LFPAFG +Q QSLRP     A P  H  QPFHG PT  AVA  PHPP IRP
Sbjct: 108  ERESVHLTNLFPAFGQLQPQSLRPSPPAPAPPPPHLPQPFHGQPTSSAVAAQPHPPAIRP 167

Query: 1376 RVRARRGQATDPHSXXXXXXXXXXXXRMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQ 1197
            RVRARRGQATDPHS            RMKALQELVPS+NKTDRAAMLDEIVDYVKFLRLQ
Sbjct: 168  RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQ 227

Query: 1196 VKVLSMSRXXXXXXXXXXXADIPLXXXXXXXXXXXSNHLAWEKWSTDGTEHEVAKLMEED 1017
            VKVLSMSR           AD+PL           SN  AWEKWSTDGTE +VAKLMEED
Sbjct: 228  VKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEED 287

Query: 1016 VGAAMQFLQSKALCIMPISLASAIYHNHQPDASTMIKPEPNGPT 885
            VGAAMQFLQSKALCIMPISLASAI+  HQP+ ST++KPE + P+
Sbjct: 288  VGAAMQFLQSKALCIMPISLASAIFRTHQPEPSTLVKPESDAPS 331


>emb|CBI34158.3| unnamed protein product [Vitis vinifera]
          Length = 261

 Score =  282 bits (721), Expect = 2e-73
 Identities = 152/224 (67%), Positives = 164/224 (73%), Gaps = 7/224 (3%)
 Frame = -3

Query: 1535 ERDSVHLTSLFPAFGHVQTQSLRP-----AAPQAH--QPFHGHPTPGAVAVVPHPPTIRP 1377
            ER+SVHLT+LFPAFG +Q QSLRP     A P  H  QPFHG PT  AVA  PHPP IRP
Sbjct: 38   ERESVHLTNLFPAFGQLQPQSLRPSPPAPAPPPPHLPQPFHGQPTSSAVAAQPHPPAIRP 97

Query: 1376 RVRARRGQATDPHSXXXXXXXXXXXXRMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQ 1197
            RVRARRGQATDPHS            RMKALQELVPS+NKTDRAAMLDEIVDYVKFLRLQ
Sbjct: 98   RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQ 157

Query: 1196 VKVLSMSRXXXXXXXXXXXADIPLXXXXXXXXXXXSNHLAWEKWSTDGTEHEVAKLMEED 1017
            VKVLSMSR           AD+PL           SN  AWEKWSTDGTE +VAKLMEED
Sbjct: 158  VKVLSMSRLGGAGAVAQLVADVPLLSIEGDGTEGGSNQQAWEKWSTDGTEQQVAKLMEED 217

Query: 1016 VGAAMQFLQSKALCIMPISLASAIYHNHQPDASTMIKPEPNGPT 885
            VGAAMQFLQSKALCIMPISLASAI+  HQP+ ST++KPE + P+
Sbjct: 218  VGAAMQFLQSKALCIMPISLASAIFRTHQPEPSTLVKPESDAPS 261


>ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
            gi|223529126|gb|EEF31106.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 326

 Score =  276 bits (706), Expect = 1e-71
 Identities = 150/246 (60%), Positives = 170/246 (69%), Gaps = 7/246 (2%)
 Frame = -3

Query: 1601 GSGKRFYDDHHDDDLNKAS-----VNNERDSVHLTSLFPAFGHVQTQSLRPAAP-QAHQP 1440
            GSG    ++H +++ N  S     V N+RDSVH+ SLFP FG +QTQ+LRP  P   HQP
Sbjct: 81   GSGALDNNNHTNNNNNNVSSSTTSVINDRDSVHMASLFPTFGQLQTQTLRPPPPPHLHQP 140

Query: 1439 FHGHPTPGAVAVVPHPPTIRPRVRARRGQATDPHSXXXXXXXXXXXXRMKALQELVPSSN 1260
            FHG PTPG V+    PP IRPRVRARRGQATDPHS            RMKALQELVP++N
Sbjct: 141  FHGQPTPGVVSAASQPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTAN 200

Query: 1259 KTDRAAMLDEIVDYVKFLRLQVKVLSMSRXXXXXXXXXXXADIPL-XXXXXXXXXXXSNH 1083
            KTDRAAM+DEIVDYVKFLRLQVKVLSMSR           AD+PL            +N 
Sbjct: 201  KTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGAAGAVAQLVADVPLASVEGESIDGAAANQ 260

Query: 1082 LAWEKWSTDGTEHEVAKLMEEDVGAAMQFLQSKALCIMPISLASAIYHNHQPDASTMIKP 903
              WEKWS DGTE +VAKLMEED+GAAMQFLQSKALCIMPISLASAI   H PDA ++IKP
Sbjct: 261  QTWEKWSNDGTEQQVAKLMEEDIGAAMQFLQSKALCIMPISLASAILRTHPPDAPSIIKP 320

Query: 902  EPNGPT 885
            E N P+
Sbjct: 321  ESNTPS 326


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