BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002690
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|1...   256   7e-66
ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapte...   248   2e-63
ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|2...   246   4e-63
ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arab...   236   5e-60
ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS...   235   1e-59

>ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|118481362|gb|ABK92624.1|
           unknown [Populus trichocarpa]
           gi|222851266|gb|EEE88813.1| predicted protein [Populus
           trichocarpa]
          Length = 158

 Score =  256 bits (653), Expect = 7e-66
 Identities = 127/177 (71%), Positives = 141/177 (79%)
 Frame = -2

Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVSAAGPGKGGGLLDRPTIEK 710
           M+TAICGR++LSPNHVFN KPGDK SV RG C NRGI M +S    GKGGGLL++P IE+
Sbjct: 1   METAICGRIALSPNHVFNPKPGDKNSVCRGPCANRGILMAISTTCSGKGGGLLEKPVIER 60

Query: 709 TTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVVQVLM 530
           TTPGRESE+D+RKS+K +PPYRVMLH                    DNYNKREYVVQVLM
Sbjct: 61  TTPGRESEFDLRKSKKMAPPYRVMLH-------------------NDNYNKREYVVQVLM 101

Query: 529 KVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 359
           KVIPGMT+D AVN+MQEAH NGL+VVIICAQADAEEHC QLRGNGLLSSIEPASGGC
Sbjct: 102 KVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEEHCMQLRGNGLLSSIEPASGGC 158


>ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS [Vitis
           vinifera] gi|147853628|emb|CAN80233.1| hypothetical
           protein VITISV_037190 [Vitis vinifera]
          Length = 157

 Score =  248 bits (632), Expect = 2e-63
 Identities = 124/177 (70%), Positives = 141/177 (79%)
 Frame = -2

Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVSAAGPGKGGGLLDRPTIEK 710
           M+ AICGR++LSPNHVFN+K GDK S+ +G CTNR   M +SA+GPGKGG LL+RP IEK
Sbjct: 1   MENAICGRLALSPNHVFNSKSGDKHSLLKGPCTNRSFLMAISASGPGKGG-LLERPVIEK 59

Query: 709 TTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVVQVLM 530
            TPGRESE+D+RKSRK +PPYRV+LH                    DNYNKREYVVQVLM
Sbjct: 60  VTPGRESEFDLRKSRKIAPPYRVILHN-------------------DNYNKREYVVQVLM 100

Query: 529 KVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 359
           KVIPGMT+D AVN+MQEAH NGL+VVIICAQADAE+HC QLRGNGLLSSIEPASGGC
Sbjct: 101 KVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC 157


>ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|222864995|gb|EEF02126.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  246 bits (629), Expect = 4e-63
 Identities = 124/181 (68%), Positives = 142/181 (78%), Gaps = 4/181 (2%)
 Frame = -2

Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVSAA----GPGKGGGLLDRP 722
           M+TAICGR++LSPNHVFN KPGDK SV RG C +RGI M++SA     G G GGG+L++P
Sbjct: 1   METAICGRIALSPNHVFNPKPGDKNSVCRGPCASRGILMSISATVSGKGGGGGGGILEKP 60

Query: 721 TIEKTTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVV 542
            IE+TTPGRESE+D+RKS+K +PPYRV+LH                    DNYNKREYVV
Sbjct: 61  VIERTTPGRESEFDLRKSKKMAPPYRVILHN-------------------DNYNKREYVV 101

Query: 541 QVLMKVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGG 362
           QVLMKVIPGMT+D AVN+MQEAH NGL+VVIIC QADAEEHC QLRGNGLLSSIEPASGG
Sbjct: 102 QVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIICTQADAEEHCMQLRGNGLLSSIEPASGG 161

Query: 361 C 359
           C
Sbjct: 162 C 162


>ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp.
           lyrata] gi|297334517|gb|EFH64935.1| hypothetical protein
           ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score =  236 bits (603), Expect = 5e-60
 Identities = 118/178 (66%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
 Frame = -2

Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVSA-AGPGKGGGLLDRPTIE 713
           M+TAICGR++L+P+ +FN+K GDK  V +G C NRG+ MT+S  A  GKGGG+LD+P IE
Sbjct: 1   METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRGVLMTLSTYAALGKGGGVLDKPIIE 60

Query: 712 KTTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVVQVL 533
           KTTPGRESE+D+RKS+K +PPYRV+LH                    DN+NKREYVVQVL
Sbjct: 61  KTTPGRESEFDLRKSKKMAPPYRVILHN-------------------DNFNKREYVVQVL 101

Query: 532 MKVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 359
           MKVIPGMTVD AVN+MQEAHINGLAVVI+CAQADAE+HC QLRGNGLLSS+EP  GGC
Sbjct: 102 MKVIPGMTVDNAVNIMQEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159


>ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis
           thaliana] gi|5734712|gb|AAD49977.1|AC008075_10 ESTs
           gb|T41781 and gb|AA586096 come from this gene
           [Arabidopsis thaliana]
           gi|12484207|gb|AAG54002.1|AF336921_1 unknown protein
           [Arabidopsis thaliana] gi|15010628|gb|AAK73973.1|
           At1g68660/F24J5_4 [Arabidopsis thaliana]
           gi|21464569|gb|AAM52239.1| At1g68660/F24J5_4
           [Arabidopsis thaliana] gi|21553930|gb|AAM63011.1|
           unknown [Arabidopsis thaliana]
           gi|332196703|gb|AEE34824.1| ATP-dependent Clp protease
           adaptor protein ClpS [Arabidopsis thaliana]
          Length = 159

 Score =  235 bits (599), Expect = 1e-59
 Identities = 118/178 (66%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
 Frame = -2

Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVS-AAGPGKGGGLLDRPTIE 713
           M+TAICGR++L+P+ +FN+K GDK  V +G C NR I MT+S +A  GKGGG+LD+P IE
Sbjct: 1   METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPIIE 60

Query: 712 KTTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVVQVL 533
           KTTPGRESE+D+RKS+K +PPYRV+LH                    DN+NKREYVVQVL
Sbjct: 61  KTTPGRESEFDLRKSKKIAPPYRVILHN-------------------DNFNKREYVVQVL 101

Query: 532 MKVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 359
           MKVIPGMTVD AVN+MQEAHINGLAVVI+CAQADAE+HC QLRGNGLLSS+EP  GGC
Sbjct: 102 MKVIPGMTVDNAVNIMQEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159