BLASTX nr result
ID: Coptis21_contig00002690
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002690 (953 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|1... 256 7e-66 ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapte... 248 2e-63 ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|2... 246 4e-63 ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arab... 236 5e-60 ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS... 235 1e-59 >ref|XP_002311446.1| predicted protein [Populus trichocarpa] gi|118481362|gb|ABK92624.1| unknown [Populus trichocarpa] gi|222851266|gb|EEE88813.1| predicted protein [Populus trichocarpa] Length = 158 Score = 256 bits (653), Expect = 7e-66 Identities = 127/177 (71%), Positives = 141/177 (79%) Frame = -2 Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVSAAGPGKGGGLLDRPTIEK 710 M+TAICGR++LSPNHVFN KPGDK SV RG C NRGI M +S GKGGGLL++P IE+ Sbjct: 1 METAICGRIALSPNHVFNPKPGDKNSVCRGPCANRGILMAISTTCSGKGGGLLEKPVIER 60 Query: 709 TTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVVQVLM 530 TTPGRESE+D+RKS+K +PPYRVMLH DNYNKREYVVQVLM Sbjct: 61 TTPGRESEFDLRKSKKMAPPYRVMLH-------------------NDNYNKREYVVQVLM 101 Query: 529 KVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 359 KVIPGMT+D AVN+MQEAH NGL+VVIICAQADAEEHC QLRGNGLLSSIEPASGGC Sbjct: 102 KVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEEHCMQLRGNGLLSSIEPASGGC 158 >ref|XP_002281884.1| PREDICTED: ATP-dependent Clp protease adapter protein ClpS [Vitis vinifera] gi|147853628|emb|CAN80233.1| hypothetical protein VITISV_037190 [Vitis vinifera] Length = 157 Score = 248 bits (632), Expect = 2e-63 Identities = 124/177 (70%), Positives = 141/177 (79%) Frame = -2 Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVSAAGPGKGGGLLDRPTIEK 710 M+ AICGR++LSPNHVFN+K GDK S+ +G CTNR M +SA+GPGKGG LL+RP IEK Sbjct: 1 MENAICGRLALSPNHVFNSKSGDKHSLLKGPCTNRSFLMAISASGPGKGG-LLERPVIEK 59 Query: 709 TTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVVQVLM 530 TPGRESE+D+RKSRK +PPYRV+LH DNYNKREYVVQVLM Sbjct: 60 VTPGRESEFDLRKSRKIAPPYRVILHN-------------------DNYNKREYVVQVLM 100 Query: 529 KVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 359 KVIPGMT+D AVN+MQEAH NGL+VVIICAQADAE+HC QLRGNGLLSSIEPASGGC Sbjct: 101 KVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC 157 >ref|XP_002315955.1| predicted protein [Populus trichocarpa] gi|222864995|gb|EEF02126.1| predicted protein [Populus trichocarpa] Length = 162 Score = 246 bits (629), Expect = 4e-63 Identities = 124/181 (68%), Positives = 142/181 (78%), Gaps = 4/181 (2%) Frame = -2 Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVSAA----GPGKGGGLLDRP 722 M+TAICGR++LSPNHVFN KPGDK SV RG C +RGI M++SA G G GGG+L++P Sbjct: 1 METAICGRIALSPNHVFNPKPGDKNSVCRGPCASRGILMSISATVSGKGGGGGGGILEKP 60 Query: 721 TIEKTTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVV 542 IE+TTPGRESE+D+RKS+K +PPYRV+LH DNYNKREYVV Sbjct: 61 VIERTTPGRESEFDLRKSKKMAPPYRVILHN-------------------DNYNKREYVV 101 Query: 541 QVLMKVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGG 362 QVLMKVIPGMT+D AVN+MQEAH NGL+VVIIC QADAEEHC QLRGNGLLSSIEPASGG Sbjct: 102 QVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIICTQADAEEHCMQLRGNGLLSSIEPASGG 161 Query: 361 C 359 C Sbjct: 162 C 162 >ref|XP_002888676.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata] gi|297334517|gb|EFH64935.1| hypothetical protein ARALYDRAFT_894639 [Arabidopsis lyrata subsp. lyrata] Length = 159 Score = 236 bits (603), Expect = 5e-60 Identities = 118/178 (66%), Positives = 140/178 (78%), Gaps = 1/178 (0%) Frame = -2 Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVSA-AGPGKGGGLLDRPTIE 713 M+TAICGR++L+P+ +FN+K GDK V +G C NRG+ MT+S A GKGGG+LD+P IE Sbjct: 1 METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRGVLMTLSTYAALGKGGGVLDKPIIE 60 Query: 712 KTTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVVQVL 533 KTTPGRESE+D+RKS+K +PPYRV+LH DN+NKREYVVQVL Sbjct: 61 KTTPGRESEFDLRKSKKMAPPYRVILHN-------------------DNFNKREYVVQVL 101 Query: 532 MKVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 359 MKVIPGMTVD AVN+MQEAHINGLAVVI+CAQADAE+HC QLRGNGLLSS+EP GGC Sbjct: 102 MKVIPGMTVDNAVNIMQEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159 >ref|NP_564937.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis thaliana] gi|5734712|gb|AAD49977.1|AC008075_10 ESTs gb|T41781 and gb|AA586096 come from this gene [Arabidopsis thaliana] gi|12484207|gb|AAG54002.1|AF336921_1 unknown protein [Arabidopsis thaliana] gi|15010628|gb|AAK73973.1| At1g68660/F24J5_4 [Arabidopsis thaliana] gi|21464569|gb|AAM52239.1| At1g68660/F24J5_4 [Arabidopsis thaliana] gi|21553930|gb|AAM63011.1| unknown [Arabidopsis thaliana] gi|332196703|gb|AEE34824.1| ATP-dependent Clp protease adaptor protein ClpS [Arabidopsis thaliana] Length = 159 Score = 235 bits (599), Expect = 1e-59 Identities = 118/178 (66%), Positives = 140/178 (78%), Gaps = 1/178 (0%) Frame = -2 Query: 889 MDTAICGRVSLSPNHVFNNKPGDKQSVYRGLCTNRGIPMTVS-AAGPGKGGGLLDRPTIE 713 M+TAICGR++L+P+ +FN+K GDK V +G C NR I MT+S +A GKGGG+LD+P IE Sbjct: 1 METAICGRLALAPSSLFNSKSGDKHLVSKGPCVNRSILMTLSTSAALGKGGGVLDKPIIE 60 Query: 712 KTTPGRESEYDVRKSRKTSPPYRVMLHXXXXXXXXXXXXXXXXXXXXDNYNKREYVVQVL 533 KTTPGRESE+D+RKS+K +PPYRV+LH DN+NKREYVVQVL Sbjct: 61 KTTPGRESEFDLRKSKKIAPPYRVILHN-------------------DNFNKREYVVQVL 101 Query: 532 MKVIPGMTVDIAVNVMQEAHINGLAVVIICAQADAEEHCTQLRGNGLLSSIEPASGGC 359 MKVIPGMTVD AVN+MQEAHINGLAVVI+CAQADAE+HC QLRGNGLLSS+EP GGC Sbjct: 102 MKVIPGMTVDNAVNIMQEAHINGLAVVIVCAQADAEQHCMQLRGNGLLSSVEPDGGGC 159