BLASTX nr result

ID: Coptis21_contig00002687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002687
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransgluc...   450   e-124
ref|XP_002274858.1| PREDICTED: probable xyloglucan endotransgluc...   448   e-124
ref|XP_002273742.2| PREDICTED: probable xyloglucan endotransgluc...   445   e-123
emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera]   445   e-122
ref|XP_002274827.1| PREDICTED: probable xyloglucan endotransgluc...   444   e-122

>ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein
            23 [Vitis vinifera]
          Length = 296

 Score =  450 bits (1157), Expect = e-124
 Identities = 213/262 (81%), Positives = 229/262 (87%), Gaps = 4/262 (1%)
 Frame = -3

Query: 1055 VVTLGGNFYQDFDITWGDGRGKILNNGQLLTLSLDKASGSGFVSKNEYLFGKINMQLKLV 876
            VV   GN YQDFD+TWGDGR KILNNGQLLTLSLDKASGSGF SKNEYLFGKI+MQLKLV
Sbjct: 24   VVASVGNLYQDFDLTWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLFGKIDMQLKLV 83

Query: 875  PGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGDPYILHTNVFSQGKGNKEQQFYLWFDP 696
            PGNSAGTVTAYYLSSQGPTHDEIDFEFLGN+SGDPYILHTNVFSQGKGN+EQQFYLWFDP
Sbjct: 84   PGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDP 143

Query: 695  TADFHTYSLLWNPQSIIFSVDDTPIREFKNSESLGVPFPKSQPMKIHSSLWNADDWATRG 516
            TADFHTYS+LWNPQ IIFSVD TPIREFKNSES+GVPFPK+QPM+I+SSLWNADDWATRG
Sbjct: 144  TADFHTYSILWNPQRIIFSVDGTPIREFKNSESIGVPFPKNQPMRIYSSLWNADDWATRG 203

Query: 515  GLVKTDWTFVPFTASYRNFTADACV----PXXXXXXXXXXXXXXNAWFSQKLDSASQDKI 348
            GLVKTDWT  PFTASYRNF A+ACV                     W+SQ+LDS SQ+++
Sbjct: 204  GLVKTDWTQAPFTASYRNFNANACVWSSRSSSCSSTSPSSTSTNGGWYSQELDSTSQERM 263

Query: 347  RWVQKNYMIYNYCTDTKRFPQG 282
            +WVQKNYMIYNYCTDTKRFPQG
Sbjct: 264  KWVQKNYMIYNYCTDTKRFPQG 285


>ref|XP_002274858.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein
            23 [Vitis vinifera]
          Length = 296

 Score =  448 bits (1153), Expect = e-124
 Identities = 212/262 (80%), Positives = 230/262 (87%), Gaps = 4/262 (1%)
 Frame = -3

Query: 1055 VVTLGGNFYQDFDITWGDGRGKILNNGQLLTLSLDKASGSGFVSKNEYLFGKINMQLKLV 876
            VV   GN YQDFD+TWGDGR KILNNGQLLTLSLDKASGSGF SKNEYLFGKI+MQLKLV
Sbjct: 24   VVASVGNLYQDFDLTWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLFGKIDMQLKLV 83

Query: 875  PGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGDPYILHTNVFSQGKGNKEQQFYLWFDP 696
            PGNSAGTVTAYYLSSQGPTHDEIDFEFLGN+SGDPYILHTNVFSQGKGN+EQQFYLWFDP
Sbjct: 84   PGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDP 143

Query: 695  TADFHTYSLLWNPQSIIFSVDDTPIREFKNSESLGVPFPKSQPMKIHSSLWNADDWATRG 516
            TADFHTYS+LWNPQ IIFSVD TPIREFKNSES+GVPFPK+QPM+I+SSLWNADDWATRG
Sbjct: 144  TADFHTYSILWNPQRIIFSVDGTPIREFKNSESIGVPFPKNQPMRIYSSLWNADDWATRG 203

Query: 515  GLVKTDWTFVPFTASYRNFTADACV----PXXXXXXXXXXXXXXNAWFSQKLDSASQDKI 348
            GLVKTDW+  PFTASYRNF A+ACV                   + W+SQ+LDS SQ+++
Sbjct: 204  GLVKTDWSQAPFTASYRNFNANACVWSSGSSSCSSTSPSSTSTNSGWYSQELDSTSQERM 263

Query: 347  RWVQKNYMIYNYCTDTKRFPQG 282
            +WVQKNYMIYNYCTDTKRFPQG
Sbjct: 264  KWVQKNYMIYNYCTDTKRFPQG 285


>ref|XP_002273742.2| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein
            23-like [Vitis vinifera]
          Length = 297

 Score =  445 bits (1145), Expect = e-123
 Identities = 208/257 (80%), Positives = 227/257 (88%), Gaps = 4/257 (1%)
 Frame = -3

Query: 1040 GNFYQDFDITWGDGRGKILNNGQLLTLSLDKASGSGFVSKNEYLFGKINMQLKLVPGNSA 861
            GNFYQDFDITWGDGRGKILNNG+LLTLSLDK SGSGF SKNEYLFGKI+MQLKLVPGNSA
Sbjct: 30   GNFYQDFDITWGDGRGKILNNGELLTLSLDKPSGSGFQSKNEYLFGKIDMQLKLVPGNSA 89

Query: 860  GTVTAYYLSSQGPTHDEIDFEFLGNVSGDPYILHTNVFSQGKGNKEQQFYLWFDPTADFH 681
            GTVTAYYLSSQGPTHDEIDFEFLGN+SGDPYILHTNVFSQGKGN+EQQFYLWFDPTADFH
Sbjct: 90   GTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDPTADFH 149

Query: 680  TYSLLWNPQSIIFSVDDTPIREFKNSESLGVPFPKSQPMKIHSSLWNADDWATRGGLVKT 501
            TYS+LWNPQ IIFSVD TPIREFKNSES+GVP+PK+QPM+I+SSLWNADDWATRGGLVKT
Sbjct: 150  TYSILWNPQRIIFSVDGTPIREFKNSESIGVPYPKNQPMRIYSSLWNADDWATRGGLVKT 209

Query: 500  DWTFVPFTASYRNFTADACV----PXXXXXXXXXXXXXXNAWFSQKLDSASQDKIRWVQK 333
            DW+  PFTASYRNF A+AC+                     W+SQ+LDS SQ++++WVQK
Sbjct: 210  DWSQAPFTASYRNFNANACLWSSGSSSCSSTSPSSTSTNGGWYSQELDSTSQERMKWVQK 269

Query: 332  NYMIYNYCTDTKRFPQG 282
            NYMIYNYC DTKRFPQG
Sbjct: 270  NYMIYNYCADTKRFPQG 286


>emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera]
          Length = 287

 Score =  445 bits (1144), Expect = e-122
 Identities = 210/262 (80%), Positives = 228/262 (87%), Gaps = 4/262 (1%)
 Frame = -3

Query: 1055 VVTLGGNFYQDFDITWGDGRGKILNNGQLLTLSLDKASGSGFVSKNEYLFGKINMQLKLV 876
            VV   GNF QDFDITWGDGR KILNNGQLLTLSLDKASGSGF S+NEYLFGKI+MQLKLV
Sbjct: 15   VVASAGNFNQDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSRNEYLFGKIDMQLKLV 74

Query: 875  PGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGDPYILHTNVFSQGKGNKEQQFYLWFDP 696
            PGNSAGTVTAYYLSSQGPTHDEIDFEFLGN+SGDPYILHTNVFSQGKGN+EQQFYLWFDP
Sbjct: 75   PGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDP 134

Query: 695  TADFHTYSLLWNPQSIIFSVDDTPIREFKNSESLGVPFPKSQPMKIHSSLWNADDWATRG 516
            TADFHTYS+LWNPQ IIFSVD TPIREFKNSES+GV +PK+QPM+I+SSLWNADDWATRG
Sbjct: 135  TADFHTYSILWNPQRIIFSVDGTPIREFKNSESIGVSYPKNQPMRIYSSLWNADDWATRG 194

Query: 515  GLVKTDWTFVPFTASYRNFTADACV----PXXXXXXXXXXXXXXNAWFSQKLDSASQDKI 348
            GLVKTDW+  PFTASYRNF ADAC+                     W+SQ+LDS SQ+++
Sbjct: 195  GLVKTDWSQAPFTASYRNFNADACIWSSGASSCSSTTPSSTSTSGQWYSQELDSTSQERM 254

Query: 347  RWVQKNYMIYNYCTDTKRFPQG 282
            +WVQKNYMIYNYCTDTKRFPQG
Sbjct: 255  KWVQKNYMIYNYCTDTKRFPQG 276


>ref|XP_002274827.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein
            23 [Vitis vinifera] gi|147802595|emb|CAN77531.1|
            hypothetical protein VITISV_019831 [Vitis vinifera]
          Length = 296

 Score =  444 bits (1142), Expect = e-122
 Identities = 211/262 (80%), Positives = 227/262 (86%), Gaps = 4/262 (1%)
 Frame = -3

Query: 1055 VVTLGGNFYQDFDITWGDGRGKILNNGQLLTLSLDKASGSGFVSKNEYLFGKINMQLKLV 876
            VV   GN YQDFDITWGDGR KILNNGQLLTLSLDKASGSGF S NEYLFGKI+MQLKLV
Sbjct: 24   VVASVGNLYQDFDITWGDGRAKILNNGQLLTLSLDKASGSGFRSNNEYLFGKIDMQLKLV 83

Query: 875  PGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGDPYILHTNVFSQGKGNKEQQFYLWFDP 696
            PGNSAGTVTAYYLSSQGPTHDEIDFEFLGN+SGDPYILHTNVFSQGKGN+EQQFYLWFDP
Sbjct: 84   PGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNVFSQGKGNREQQFYLWFDP 143

Query: 695  TADFHTYSLLWNPQSIIFSVDDTPIREFKNSESLGVPFPKSQPMKIHSSLWNADDWATRG 516
            TADFHTYS+LWNPQ IIFSVD TPIREFKNSES+GVP+PK+QPM+I+SSLWNADDWATRG
Sbjct: 144  TADFHTYSVLWNPQRIIFSVDGTPIREFKNSESIGVPYPKNQPMRIYSSLWNADDWATRG 203

Query: 515  GLVKTDWTFVPFTASYRNFTADACV----PXXXXXXXXXXXXXXNAWFSQKLDSASQDKI 348
            GLVKTDW+  PFTASYRNF A+ACV                     W+SQ+LDS SQ+++
Sbjct: 204  GLVKTDWSQAPFTASYRNFNANACVWSSGSSSCSSTSPSSTSTNGGWYSQELDSTSQERM 263

Query: 347  RWVQKNYMIYNYCTDTKRFPQG 282
             WVQKNYMIYNYCTDTKRFPQG
Sbjct: 264  TWVQKNYMIYNYCTDTKRFPQG 285


Top