BLASTX nr result

ID: Coptis21_contig00002680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002680
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524093.1| conserved hypothetical protein [Ricinus comm...    59   4e-07

>ref|XP_002524093.1| conserved hypothetical protein [Ricinus communis]
           gi|223536661|gb|EEF38303.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 484

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
 Frame = +1

Query: 16  KNGTTDKDKKANKKGSTVVAXXXXXXXXXXXXFTSRGV-ANGLKKSTDGKPLKTDTK--- 183
           KN    KDK  N K +   +            F ++GV A+ +K S DG P KT +K   
Sbjct: 77  KNNKMSKDKP-NLKSTASFSRHQKPSLSQSLSFPAKGVRADNMKMSIDGHPTKTMSKHAK 135

Query: 184 -------VNGTDSKSSVYARLSNPTRRVSTGGSSIETKPTFDGSTPKRATLASVPSVRRS 342
                  VN   S +S+   L+ P+RR+STG  S E+      +  +R TLA++PS +++
Sbjct: 136 DDGRKGQVNSNGSGTSLSC-LTQPSRRLSTGVHSKESSGNDTKAISRRTTLATMPSKQKA 194

Query: 343 APGKSDTVKASVDGPASEVTELHDQS 420
            P K  ++  S +   +EV+EL D +
Sbjct: 195 MPVKLSSLNESTNSLPAEVSELADNN 220


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