BLASTX nr result

ID: Coptis21_contig00002674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002674
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608726.1| hypothetical protein MTR_4g101070 [Medicago ...    58   7e-07
ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794...    55   5e-06
emb|CBI31915.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    55   5e-06
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]    55   5e-06

>ref|XP_003608726.1| hypothetical protein MTR_4g101070 [Medicago truncatula]
           gi|355509781|gb|AES90923.1| hypothetical protein
           MTR_4g101070 [Medicago truncatula]
          Length = 752

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +1

Query: 4   CLTCLVIVLQATCRSLIFK-QAKFCGGISDYKWSMLLIVIAQILTIIVGTIAIVFRWLS 177
           C+   + +L+A  RS +     KFC G SDYKWS++LI+I Q+  + VGTIA  FRW +
Sbjct: 238 CVLSTLTLLEAMLRSYLMSWSVKFCAGESDYKWSIILILIVQVAAVGVGTIAPAFRWFA 296


>ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794740 [Glycine max]
          Length = 760

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
 Frame = +1

Query: 4   CLTCLVIVLQATCRSLIFKQA-KFCGGISDYKWSMLLIVIAQILTIIVGTIAIVFRW 171
           CL   + +++A  RS +   +  FC G +DYKWS++LI+I Q+  ++VGTIA  FRW
Sbjct: 242 CLLSTLTLVEAMLRSYLMPWSFDFCTGDTDYKWSIILILIVQVAAVVVGTIAPAFRW 298


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1   VCLTCLVIVLQATCRSLIFKQA-KFCGGISDYKWSMLLIVIAQILTIIVGTIAIVFRW 171
           +CL    I+++A  RS +   + KFC G SDYKWS+ LI+I+Q + + VGTI   FRW
Sbjct: 239 LCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRW 296


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1   VCLTCLVIVLQATCRSLIFKQA-KFCGGISDYKWSMLLIVIAQILTIIVGTIAIVFRW 171
           +CL    I+++A  RS +   + KFC G SDYKWS+ LI+I+Q + + VGTI   FRW
Sbjct: 239 LCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRW 296


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = +1

Query: 1   VCLTCLVIVLQATCRSLIFKQA-KFCGGISDYKWSMLLIVIAQILTIIVGTIAIVFRW 171
           +CL    I+++A  RS +   + KFC G SDYKWS+ LI+I+Q + + VGTI   FRW
Sbjct: 239 LCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIGPAFRW 296


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