BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002671
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_003622885.1| F-box/kelch-repeat protein [Medicago truncat...    63   4e-08
ref|XP_003622883.1| F-box protein [Medicago truncatula] gi|35549...    63   4e-08
ref|XP_003623446.1| F-box protein [Medicago truncatula] gi|35549...    62   6e-08

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
 Frame = -2

Query: 565 QMEKLPLEITTNILSRLQLRQTGKCRCVSKLWRSILSHPTFPTTQFAQLSK-TSPDILLH 389
           ++ KLP EI + ILSRL ++   + +CVSK WRS++SHP F      +  + T+ +    
Sbjct: 4   KIPKLPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKI 63

Query: 388 FKAVPP--LFGSRIYYLEDDEAILKRPIHPLTLADEHFLADSFSDHYPYILGSCNGFICL 215
           F +  P        Y+  DD  +  +   P++  +  ++          ILGSCNG +C 
Sbjct: 64  FLSTDPHLSIDPEAYFDADDNLLTTQLKFPVSYPEYSYIE---------ILGSCNGLVC- 113

Query: 214 FSPIVDLNGRGPVYLIPRNP-IYVFNPITRNYSKFPLFDIPEFHTRAGSNLRPDKWFSGF 38
                         LI  NP IY++NP TR   +  +          GS+   D  F GF
Sbjct: 114 -------------GLIHDNPLIYIWNPSTRESRELAI---------PGSS--EDDAFYGF 149

Query: 37  GYVDSKMEYKLV 2
           GY     +YK+V
Sbjct: 150 GYDVKLDDYKIV 161


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
 Frame = -2

Query: 562 MEKLPLEITTNILSRLQLRQTGKCRCVSKLWRSILSHPTFPTTQFAQ---LSKTSPDIL- 395
           +  LP E+   ILSRL  +   K RCVSK ++S++S+P F  T   +   LS+  PD   
Sbjct: 76  LPNLPHELIIEILSRLPAKSLIKFRCVSKSFKSLISNPQFIKTHLEKVKNLSRNDPDFSP 135

Query: 394 -LHFKAVPPLFGSRIYYLEDDEAILKRPIHPLTLADEHFLADSFSDHYPYILGSCNGFIC 218
            +   +  PLF  +   L    ++   P+    + D + L D +   Y +++GSC+G +C
Sbjct: 136 EIVISSSEPLFRLKSCSL---YSVYNNPVTDAVVIDYYLLKDIY--RYDWVVGSCDGLVC 190

Query: 217 LFSPIVDLNGRGPVYLIPRNPIYVFNPITRNYSKFPLFDIPEFHTRAGSNLRPDKWFSGF 38
           L               I ++ + ++NP TR +++ P  D+  F  + GS         GF
Sbjct: 191 LG--------------IKQDFVVLWNPSTRVFNRLP--DL-GFAKKLGSYT-----VFGF 228

Query: 37  GYVDSKMEYKLV 2
           GY     +YK++
Sbjct: 229 GYDSQIDDYKVL 240


>ref|XP_003622885.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355497900|gb|AES79103.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 426

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
 Frame = -2

Query: 544 EITTNILSRLQLRQTGKCRCVSKLWRSILSHPTFPTTQFAQLSKTSPDILLHFKAVPPLF 365
           ++   ILS L ++   + +CVSK W++++S PTF              I LH K      
Sbjct: 16  DLIEEILSFLDVKSLTRFKCVSKSWKTLISDPTF--------------IKLHLKR--SAR 59

Query: 364 GSRIYYLEDDEAILKRPIHPL------TLADEHFLADSFSDHYPY-------------IL 242
            + +  + DD  ++  P+H L      TLAD  +  +      P+             ++
Sbjct: 60  NTHLTLIYDDVKMVCFPLHRLIQNTSITLADNPYFHEPCFLDSPFFQEPDFPLYRRLEVV 119

Query: 241 GSCNGFICLFSPIVDLNGRGPVYLIPRNPIYVFNPITRNYSKFPLFDIPEFHTRAGS--- 71
           GSCNG +CL+  + + N    ++L      Y++NP T+  S   +F   EFH R      
Sbjct: 120 GSCNGLLCLYGYVTNSNYE-EIFL------YLWNPATKTLSNKIVFLHDEFHLRKCGRDK 172

Query: 70  --NLRP--DKWFSGFGYVDSKMEYKLV 2
             N R     W   FGY DS  +YK+V
Sbjct: 173 MINTRSLYTLWRFWFGYDDSINDYKIV 199


>ref|XP_003622883.1| F-box protein [Medicago truncatula] gi|355497898|gb|AES79101.1|
           F-box protein [Medicago truncatula]
          Length = 290

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
 Frame = -2

Query: 544 EITTNILSRLQLRQTGKCRCVSKLWRSILSHPTFPTTQFAQLSKTSPDILLHFKAVPPLF 365
           ++   ILS L ++   + +CVSK W++++S PTF              I LH K      
Sbjct: 16  DLIEEILSFLDVKSLTRFKCVSKSWKTLISDPTF--------------IKLHLKR--SAR 59

Query: 364 GSRIYYLEDDEAILKRPIHPLTLADEHFLADSFSDHYP-------------------YIL 242
            + +  + DD  ++  P+H L       LAD+   H P                    ++
Sbjct: 60  NTHLTLIYDDVKMVCFPLHRLIQNTSITLADNPYFHQPCFLDSPFFQEPDFPLYRRLEVV 119

Query: 241 GSCNGFICLFSPIVDLNGRGPVYLIPRNPIYVFNPITRNYSKFPLFDIPEFHTRAGS--- 71
           GSCNG +CL+  + + N    ++L      Y++NP T+  S   +F   EFH R      
Sbjct: 120 GSCNGLLCLYGYVTNSNYE-EIFL------YLWNPATKTLSNKIVFLHDEFHLRKCGRDK 172

Query: 70  --NLRP--DKWFSGFGYVDSKMEYKLV 2
             N R     W   FGY DS  +YK+V
Sbjct: 173 MINTRSLYTLWRFWFGYDDSINDYKIV 199


>ref|XP_003623446.1| F-box protein [Medicago truncatula] gi|355498461|gb|AES79664.1|
           F-box protein [Medicago truncatula]
          Length = 422

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
 Frame = -2

Query: 553 LPLEITTNILSRLQLRQTGKCRCVSKLWRSILSHPTFPTTQFAQLSKTSPDILLHFKAVP 374
           +P E+   ILSRL ++   + + VSK W +++S P F   +  Q S    ++++      
Sbjct: 21  IPDELVAEILSRLDVKTIVRFKSVSKSWNTLISDPAF-VDKHLQKSSQKQNLIV------ 73

Query: 373 PLFGSRIYYLEDDEAILKRPIHPLTLADEHFLADSFSDHY----PYILGSCNGFICLFSP 206
                 I+   D   + + P+H L       +    + HY     YI GSCNG ICLFS 
Sbjct: 74  ------IWNDNDGYNVSRIPLHRLIGNPSIGIHSHNNSHYLERGCYIAGSCNGLICLFSK 127

Query: 205 IVDLNGR-GPVYLIPRN-PIYVFNPITRNYSK--------FPLFDIPEFHTRAGSNLRPD 56
              +    G  ++   N  IY +NP T   S+         PL  +  FHT + S     
Sbjct: 128 YFYITENVGSRHVGHENYSIYFWNPSTGKKSEKLGSFSYSTPLDRLRPFHTLSNS----- 182

Query: 55  KWFSGFGYVDSKMEYKLV 2
            +  GFGY DS   YK+V
Sbjct: 183 -FQFGFGYDDSMKTYKVV 199