BLASTX nr result

ID: Coptis21_contig00002665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002665
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245...   331   2e-88
ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|2...   311   3e-82
ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|1...   301   2e-79
ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|22354271...   297   5e-78
ref|NP_001241398.1| uncharacterized protein LOC100813012 precurs...   280   6e-73

>ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245241 [Vitis vinifera]
            gi|298205266|emb|CBI17325.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  331 bits (849), Expect = 2e-88
 Identities = 176/304 (57%), Positives = 222/304 (73%)
 Frame = -2

Query: 1286 SSSKLNEVLSPNPFNRPRAVLMLEVGGTQADQQLVMDHLSNAQVGSAIRSKVLFESTKAE 1107
            SSSKLNE+L PNPF RPR+VLMLEV G + D ++V++H  NA   SA++    + + KAE
Sbjct: 80   SSSKLNEILLPNPFERPRSVLMLEVRGVE-DPEVVVEH-DNALFRSALKRDFFYGTDKAE 137

Query: 1106 IHLPGKDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLAS 927
            I LPG D+VSV+SLDE L  + +  C DKE+ + ASW GG YV++A  PLNGELT+ LA 
Sbjct: 138  ILLPGDDKVSVVSLDERLSFDSNTNCTDKEISDFASWMGGLYVANALKPLNGELTIPLAG 197

Query: 926  GMSLNLHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALQE 747
            G +LNLHMSK+ D EFI +++SLI NI+R  EM  D S S+ + AEL+ G F G+K L E
Sbjct: 198  GANLNLHMSKKADTEFIASLLSLIHNIKRVIEMRQDLSGSMQNAAELLTGCFDGIKVLDE 257

Query: 746  KHGLDGFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKITSQP 567
            ++G  G ++Q +EL +TTL+K+F SLQ AYKGQIVGV+ F   P       LNV  TSQP
Sbjct: 258  QYGPSGVAQQGVELLLTTLSKMFGSLQVAYKGQIVGVISFTGTPP-SSEKMLNVMFTSQP 316

Query: 566  SIRLLGEVNNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSN 387
            S R L E  +S D+T I ++ LVR+TLAWITGIIL+ STL+GIYFLLNMPLTRDTLLYSN
Sbjct: 317  SARWLAETEDSPDLTAIMKIALVRKTLAWITGIILVASTLLGIYFLLNMPLTRDTLLYSN 376

Query: 386  VKLD 375
            VKLD
Sbjct: 377  VKLD 380


>ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|222845069|gb|EEE82616.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  311 bits (796), Expect = 3e-82
 Identities = 172/304 (56%), Positives = 217/304 (71%)
 Frame = -2

Query: 1286 SSSKLNEVLSPNPFNRPRAVLMLEVGGTQADQQLVMDHLSNAQVGSAIRSKVLFESTKAE 1107
            SSSKLNEVL PNPFNRPRAV MLEV G +    +     +NA    A +SK++  S KA 
Sbjct: 78   SSSKLNEVLMPNPFNRPRAVFMLEVTGGEEIPSVAEQ--ANAMFNGAFKSKIVLGSDKAG 135

Query: 1106 IHLPGKDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLAS 927
            I LPG +EVSV+SLDE L     A   DKE+ + ASW GGSYV D  +  NGEL + LAS
Sbjct: 136  IELPG-EEVSVVSLDEEL-----ADFTDKEISDFASWLGGSYVVDPLEAWNGELAIPLAS 189

Query: 926  GMSLNLHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALQE 747
            G + + HMSK+ +REFI ++++L RN RRA EMH D S+S   PAEL+ G F GLKAL E
Sbjct: 190  GATTSFHMSKKANREFIASLLALFRNSRRAVEMHEDLSQSTQPPAELLKGCFDGLKALGE 249

Query: 746  KHGLDGFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKITSQP 567
            ++G +G +++ +EL +TTL+K+F SLQ AYKGQI GV+ FN  P  E  + L+V +TSQP
Sbjct: 250  QYGPEGAAQKGLELLLTTLSKMFDSLQTAYKGQIAGVIFFNTAPASESETVLDVMLTSQP 309

Query: 566  SIRLLGEVNNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSN 387
            S R L E    ++ T IAEV LVR TLAWITGI+L+++TL+GIY+LLNMP+TRDTLLYSN
Sbjct: 310  SARWLEETKTPSNGT-IAEVALVRMTLAWITGIVLIIATLLGIYYLLNMPITRDTLLYSN 368

Query: 386  VKLD 375
            VKLD
Sbjct: 369  VKLD 372


>ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|118488094|gb|ABK95867.1|
            unknown [Populus trichocarpa] gi|222842142|gb|EEE79689.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  301 bits (771), Expect = 2e-79
 Identities = 170/307 (55%), Positives = 216/307 (70%), Gaps = 3/307 (0%)
 Frame = -2

Query: 1286 SSSKLNEVLSPNPFNRPRAVLMLEVGG---TQADQQLVMDHLSNAQVGSAIRSKVLFEST 1116
            SS KLNEVL PNPFNRPRAV MLEV G   + ADQ       +N    +A +SK++  S 
Sbjct: 80   SSLKLNEVLLPNPFNRPRAVFMLEVTGELPSVADQ-------ANVMFNAAYKSKIVPGSN 132

Query: 1115 KAEIHLPGKDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVT 936
            KA+I LPG +EVSV+SLDE           DK++ + ASW GGSY  D  + L GEL + 
Sbjct: 133  KADIQLPG-EEVSVVSLDEEF-----VDFTDKDISDFASWLGGSYAVDPLEALKGELAIP 186

Query: 935  LASGMSLNLHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKA 756
            LASG +++LHMSK+ +REFI ++++L+RN R+A EMH D S S   PAEL+ GSF GLKA
Sbjct: 187  LASGATIDLHMSKKANREFIASLLALLRNSRKAVEMHGDLSLSNQPPAELLKGSFDGLKA 246

Query: 755  LQEKHGLDGFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKIT 576
            LQE +G +G +++ +EL +T L+K+F SLQ AYKGQIVG +LFN  P  E  + LNV +T
Sbjct: 247  LQEHYGPEGAAQKGLELLITMLSKMFDSLQAAYKGQIVGAILFNTAPAPESKTLLNVMLT 306

Query: 575  SQPSIRLLGEVNNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLL 396
            S+PS R L E    T I  IA V LVR TLAWITGI+L+++TL+GIYFL +MPLT+DTLL
Sbjct: 307  SRPSARWLEETKEPT-IEAIAVVALVRITLAWITGIVLIIATLLGIYFLFSMPLTKDTLL 365

Query: 395  YSNVKLD 375
            YSNVKLD
Sbjct: 366  YSNVKLD 372


>ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|223542711|gb|EEF44248.1| PMP,
            putative [Ricinus communis]
          Length = 369

 Score =  297 bits (760), Expect = 5e-78
 Identities = 171/305 (56%), Positives = 215/305 (70%), Gaps = 2/305 (0%)
 Frame = -2

Query: 1283 SSKLNEVLSPNPFNRPRAVLMLEVGGTQADQQLVMDHLSNAQVGSAIRSKVLFESTKAEI 1104
            SSKLNEVL PNPF+RP AV +LEV G      LV     N    +A + K   +S KA+I
Sbjct: 78   SSKLNEVLMPNPFDRPGAVFLLEVTGVN---DLVASE--NVMSSNAFKRKFALDSDKAQI 132

Query: 1103 HLPGKDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLASG 924
             LPG +EVSVISLDE LG        DKEL +L SW GGSY+ +  + LNGEL + LASG
Sbjct: 133  ELPG-EEVSVISLDEKLG-----DFTDKELSDLVSWLGGSYIVNGLESLNGELIIPLASG 186

Query: 923  MSLNLHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALQEK 744
             +L LHMSK+ DREFI ++++L  N +RA E+H D S++I+ PAEL++G F G+KALQE+
Sbjct: 187  ANLKLHMSKKADREFIESLLTLFHNSKRAIELHEDLSQAIHGPAELIMGHFHGIKALQEQ 246

Query: 743  HGLDGFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKITSQPS 564
            +G +   +Q +EL V TL+K+  S Q AYKGQIVGV++ NE+  +E    LNV  TS PS
Sbjct: 247  YGRE-VVQQGLELLVATLSKMVDSFQVAYKGQIVGVIISNERSTLESEKLLNVMFTSWPS 305

Query: 563  IRLLGEV--NNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYS 390
             R L E   +N+TD T I EV LVR+TLAW+TG+ILL+STL+GIY LLNMPLTRDTLLYS
Sbjct: 306  ARWLAEAEGSNATD-TAIMEVALVRKTLAWLTGLILLISTLIGIYLLLNMPLTRDTLLYS 364

Query: 389  NVKLD 375
            NVKLD
Sbjct: 365  NVKLD 369


>ref|NP_001241398.1| uncharacterized protein LOC100813012 precursor [Glycine max]
            gi|255635960|gb|ACU18326.1| unknown [Glycine max]
          Length = 369

 Score =  280 bits (716), Expect = 6e-73
 Identities = 162/307 (52%), Positives = 208/307 (67%), Gaps = 3/307 (0%)
 Frame = -2

Query: 1286 SSSKLNEVLSPNPFNRPRAVLMLEVGGTQADQQLVMDHLSNAQVGSAIRSKVLFESTKAE 1107
            SSSKLN+VL PNPF RPRAV +LEV G      +V D   N    ++  S     S K +
Sbjct: 78   SSSKLNDVLIPNPFKRPRAVFLLEVNGINGLGNIVQD---NPMFSNSFWST---NSDKVD 131

Query: 1106 IHLPGKDEVSVISLDEYLGLECDAVCIDKELQNLASWFGGSYVSDAQDPLNGELTVTLAS 927
            I LP +++VSV+SLDE L         DKE+ + +S  GGSY  DA +PLNG LT+ LA+
Sbjct: 132  IQLPDENDVSVVSLDEQL-----EDWTDKEISDFSSSIGGSYAPDALEPLNGVLTIPLAN 186

Query: 926  GMSLNLHMSKETDREFIVTVVSLIRNIRRATEMHVDSSRSINSPAELMIGSFSGLKALQE 747
            G S+NLHMSK+ +R+FI+ ++SL RN++RA +MH + S+S  SPAEL+ G F+G+K LQE
Sbjct: 187  GASVNLHMSKKAERKFIIGLMSLTRNVQRAIQMHDNLSQSAKSPAELLTGCFNGIKVLQE 246

Query: 746  KHGLDGFSEQKMELFVTTLTKLFHSLQEAYKGQIVGVLLFNEKPDVELGSKLNVKIT-SQ 570
            ++     ++  +EL   TLTK+F SLQEAYKGQIVG++  +     E G K +V  T   
Sbjct: 247  QYETGSIAQHGVELLYATLTKIFSSLQEAYKGQIVGIIYCHVATTQESGKKFDVIFTPHH 306

Query: 569  PSIRLLGEVN--NSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLL 396
            P  R L E N  N+T    + EV+LVRRTLAWITGIILL+STLMGI +LLNMPLTRDTLL
Sbjct: 307  PYARWLAETNAVNAT----LPEVVLVRRTLAWITGIILLVSTLMGICYLLNMPLTRDTLL 362

Query: 395  YSNVKLD 375
            YSNVKLD
Sbjct: 363  YSNVKLD 369


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