BLASTX nr result

ID: Coptis21_contig00002649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002649
         (1692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002591868.1| hypothetical protein BRAFLDRAFT_89382 [Branc...    71   1e-09
ref|XP_003439243.1| PREDICTED: kelch repeat and BTB domain-conta...    60   2e-06
ref|ZP_21928117.1| Kelch repeat-containing protein [Nitrospina g...    59   3e-06
ref|XP_002868960.1| hypothetical protein ARALYDRAFT_912541 [Arab...    58   7e-06

>ref|XP_002591868.1| hypothetical protein BRAFLDRAFT_89382 [Branchiostoma floridae]
            gi|229277080|gb|EEN47879.1| hypothetical protein
            BRAFLDRAFT_89382 [Branchiostoma floridae]
          Length = 652

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
 Frame = -2

Query: 1325 LSSYPPELAKINHFANTAWGSKIYFVGGSYFPGEEVLYGDNTDASRRVFAYDTSTRSWDD 1146
            L++ P EL    HF     G  IY  GG  F  + V     +  S RVF +DT T SW  
Sbjct: 364  LTTLPDELRTTEHFEIAGTGGCIYIAGGRSFNSQMV---TESKPSGRVFCFDTKTDSW-S 419

Query: 1145 ELAPMQVARSEHTAIAVRNKIYVFGGAQPDK--LLLQPGLAHWGECYDIATNKWVYLTPP 972
            ELAP+ + R      A    +Y  GG   D   L+ Q    +  ECY+I TN W +  P 
Sbjct: 420  ELAPLLMPRYNFALTAFDGHLYAIGGFTADSGGLVCQRPKVNCVECYNIETNTWEFACPL 479

Query: 971  PRDLFITSYAL----VKNSSQILFWSPYPKVMTIYDLDDNLW 858
            P  +   +  +    +  S+    W    + +  YD D N W
Sbjct: 480  PTGVVNPTSTVCLGQIYLSAHPSCWDDKNRRLMCYDPDTNQW 521


>ref|XP_003439243.1| PREDICTED: kelch repeat and BTB domain-containing protein 5-like
            [Oreochromis niloticus]
          Length = 615

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 40/107 (37%), Positives = 50/107 (46%)
 Frame = -2

Query: 1283 ANTAWGSKIYFVGGSYFPGEEVLYGDNTDASRRVFAYDTSTRSWDDELAPMQVARSEHTA 1104
            A  +    +Y +GG          GDN    +++ AYD     W  ELAPM+ ARS   A
Sbjct: 449  ATLSHNDTVYVIGGK---------GDNKSCLKKMCAYDAKRFEWK-ELAPMKHARSLCGA 498

Query: 1103 IAVRNKIYVFGGAQPDKLLLQPGLAHWGECYDIATNKWVYLTPPPRD 963
                NKIYV GG   +      GL    E YDIATNKW    P P++
Sbjct: 499  TVHENKIYVAGGVTDN------GLTDTMEVYDIATNKWSDFVPFPQE 539


>ref|ZP_21928117.1| Kelch repeat-containing protein [Nitrospina gracilis 3/211]
            gi|451763073|emb|CCQ89314.1| Kelch repeat-containing
            protein [Nitrospina gracilis 3/211]
          Length = 318

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 42/132 (31%), Positives = 57/132 (43%)
 Frame = -2

Query: 1292 NHFANTAWGSKIYFVGGSYFPGEEVLYGDNTDASRRVFAYDTSTRSWDDELAPMQVARSE 1113
            +H   +    K+Y +GG      +V +GDN D +    A+D  T  W   LAP+   RS 
Sbjct: 188  DHLTVSVMNGKLYALGGRI----DVDFGDNLDRNE---AFDPKTGKWQ-RLAPLPTKRSG 239

Query: 1112 HTAIAVRNKIYVFGGAQPDKLLLQPGLAHWGECYDIATNKWVYLTPPPRDLFITSYALVK 933
             T+ AV  KI+VFGG   +      G     E YD  TN W    P P        A+V 
Sbjct: 240  ITSQAVNGKIFVFGGEATE------GTFDKNEAYDPGTNTWKTYKPMPNPCHGLGSAVVN 293

Query: 932  NSSQILFWSPYP 897
             S  ++   P P
Sbjct: 294  GSIHLITGGPNP 305


>ref|XP_002868960.1| hypothetical protein ARALYDRAFT_912541 [Arabidopsis lyrata subsp.
            lyrata] gi|297314796|gb|EFH45219.1| hypothetical protein
            ARALYDRAFT_912541 [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 54/174 (31%), Positives = 74/174 (42%), Gaps = 4/174 (2%)
 Frame = -2

Query: 1442 YVCGQKPFDDMGPGWLVIDPHSCDGYNLNPLYGVGDDPLLSSYPPELAKINHFANTAWGS 1263
            YVC   P  D+ P W ++      G  LN L  +   P L S PPE + +       WG 
Sbjct: 83   YVCLLTP-PDLTPRWFILRR----GETLNRLSPI---PSLCSQPPEASSV---VVMDWG- 130

Query: 1262 KIYFVGGSYFPGEEVLYGDNTDASRRVFAYDTSTRSWDDELAPMQVARSEHTAIAVRNKI 1083
             IY +GG         +   T  +  V+  D  T +W  ++  M VAR+      V  KI
Sbjct: 131  -IYVIGG---------FIKETTRTSDVWLLDCRTHTWR-QVPSMGVARACAAVGVVNGKI 179

Query: 1082 YVFGGAQPDKLLLQPGLAHWGECYDIATNKWVYLTPPP----RDLFITSYALVK 933
            YVFGG       L P  ++W E +D  T  W  L P P    RD +I    +V+
Sbjct: 180  YVFGGC------LDPDSSNWAEVFDPKTQTWDSLPPMPDRIKRDQYIHDSVVVR 227


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