BLASTX nr result

ID: Coptis21_contig00002648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002648
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870774.1| predicted protein [Arabidopsis lyrata subsp....   119   2e-25
ref|NP_568565.2| uncharacterized protein [Arabidopsis thaliana] ...   118   6e-25
gb|AAN60241.1| unknown [Arabidopsis thaliana]                         118   6e-25
ref|XP_001770325.1| predicted protein [Physcomitrella patens sub...    92   6e-17
ref|ZP_09790347.1| hypothetical protein GOOTI_169_00100 [Gordoni...    86   2e-15

>ref|XP_002870774.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316610|gb|EFH47033.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/109 (61%), Positives = 81/109 (74%), Gaps = 13/109 (11%)
 Frame = +2

Query: 2   QKPSYGQSEEQ-EGYQKPSYGRPSYGQPEEQVGYQKPSYGQSEEQ-EGYQKPSYGRPSYG 175
           +KPSYG+SEEQ EGY+KPSYGR      E++ GY+KPSYG+SEEQ EGY+KPSYGR    
Sbjct: 198 RKPSYGRSEEQEEGYRKPSYGR----SEEQEEGYRKPSYGRSEEQEEGYRKPSYGR---- 249

Query: 176 QPEEQVGYQKPSYGQSEEQEG-YQKPSYGR----------PSYGQPEEQ 289
             EE+ GY+KPSYG+SEE+EG Y+KPSYGR          PSYG+ EEQ
Sbjct: 250 SEEEEEGYRKPSYGRSEEEEGSYRKPSYGRSEDQVESYIKPSYGRSEEQ 298



 Score =  117 bits (293), Expect = 1e-24
 Identities = 70/123 (56%), Positives = 85/123 (69%), Gaps = 27/123 (21%)
 Frame = +2

Query: 2   QKPSYGQSEEQE-GYQKPSYGR----------PSYGQPEEQV-GYQKPSYGQSEEQEG-Y 142
           +KPSYG+SEEQE GY+KPSYGR          PSYG+ EE+  GY+KPSYG+SEE+EG Y
Sbjct: 213 RKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEEEEGYRKPSYGRSEEEEGSY 272

Query: 143 QKPSYGR----------PSYGQPEEQV--GYQKPSYGQSEEQE--GYQKPSYGRPSYGQP 280
           +KPSYGR          PSYG+ EEQ    Y+KPSYG+SEEQE   Y+KPSYGR +    
Sbjct: 273 RKPSYGRSEDQVESYIKPSYGRSEEQEEGSYRKPSYGRSEEQEEGSYRKPSYGRGNDDDD 332

Query: 281 EEQ 289
           +EQ
Sbjct: 333 DEQ 335



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 52/116 (44%), Positives = 63/116 (54%), Gaps = 23/116 (19%)
 Frame = +2

Query: 11  SYGQSEEQEGYQKPSYGRPSYGQPEEQVGYQKPS-YGQSEEQEGYQKPSYGR-------- 163
           SYG         +  YG    G+ E + G +  S YG   E E  +KPSYGR        
Sbjct: 153 SYGSGYGGRTETESEYGSGGGGRTEVEYGRRPESGYGGRSETEYERKPSYGRSEEQEEGY 212

Query: 164 --PSYGQPEEQ-VGYQKPSYGQSEEQ-EGYQKPSYGR----------PSYGQPEEQ 289
             PSYG+ EEQ  GY+KPSYG+SEEQ EGY+KPSYGR          PSYG+ EE+
Sbjct: 213 RKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEEEEGYRKPSYGRSEEE 268



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 14/99 (14%)
 Frame = +2

Query: 2   QKPSYGQSEEQ-EGYQKPSYGR-----------PSYGQPEEQV--GYQKPSYGQSEEQEG 139
           +KPSYG+SE+Q E Y KPSYGR           PSYG+ EEQ    Y+KPSYG+  + + 
Sbjct: 273 RKPSYGRSEDQVESYIKPSYGRSEEQEEGSYRKPSYGRSEEQEEGSYRKPSYGRGNDDDD 332

Query: 140 YQKPSYGRPSYGQPEEQVGYQKPSYGQSEEQEGYQKPSY 256
             +    R   G  EE   Y +  YG ++  E  +K  +
Sbjct: 333 -DEQRRNRSGSGDDEEG-SYGRKKYGDNDSDEDEEKKKH 369


>ref|NP_568565.2| uncharacterized protein [Arabidopsis thaliana]
           gi|75171219|sp|Q9FKA5.1|Y5957_ARATH RecName:
           Full=Uncharacterized protein At5g39570
           gi|9758332|dbj|BAB08888.1| unnamed protein product
           [Arabidopsis thaliana] gi|16604364|gb|AAL24188.1|
           AT5g39570/MIJ24_40 [Arabidopsis thaliana]
           gi|23308191|gb|AAN18065.1| At5g39570/MIJ24_40
           [Arabidopsis thaliana] gi|332007065|gb|AED94448.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 381

 Score =  118 bits (295), Expect = 6e-25
 Identities = 66/110 (60%), Positives = 81/110 (73%), Gaps = 14/110 (12%)
 Frame = +2

Query: 2   QKPSYGQSEEQ-EGYQKPSYGRPSYGQPEEQVGYQKPSYGQSEEQ-EGYQKPSYGRPSYG 175
           +KPSYG+SEEQ EGY+KPSYGR      E++ GY+KPSYG+SEEQ EGY+KPSYGR    
Sbjct: 192 RKPSYGRSEEQEEGYRKPSYGR----SEEQEEGYRKPSYGRSEEQEEGYRKPSYGR---S 244

Query: 176 QPEEQVGYQKPSYGQSEEQE--GYQKPSYGR----------PSYGQPEEQ 289
           + E++ GY+KPSYG+SEEQE   Y+KPSYGR          PSYG+ EEQ
Sbjct: 245 EEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESYIKPSYGRSEEQ 294



 Score =  110 bits (276), Expect = 9e-23
 Identities = 70/126 (55%), Positives = 84/126 (66%), Gaps = 30/126 (23%)
 Frame = +2

Query: 2   QKPSYGQSEEQE-GYQKPSYGR----------PSYGQPEEQV--GYQKPSYGQSEEQE-- 136
           +KPSYG+SEEQE GY+KPSYGR          PSYG+ EE+   GY+KPSYG+SEEQE  
Sbjct: 207 RKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEEQEEGYRKPSYGRSEEQEEG 266

Query: 137 GYQKPSYGR----------PSYGQPEEQV--GYQKPSYGQSEEQE--GYQK-PSYGRPSY 271
            Y+KPSYGR          PSYG+ EEQ    Y+KPSYG+SEEQE   Y+K PSYGR + 
Sbjct: 267 SYRKPSYGRSDDQVESYIKPSYGRSEEQEEGSYRKPSYGRSEEQEEGSYRKQPSYGRGND 326

Query: 272 GQPEEQ 289
              +EQ
Sbjct: 327 DDDDEQ 332



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
 Frame = +2

Query: 14  YGQSEEQEGYQKP--SYGRPSYGQPEEQVGYQKPSYGQSEEQEGYQKPSYGRPSYGQPEE 187
           YG   E E  ++P  SYG    G+ E +  Y     G++E + G +  S     YG   E
Sbjct: 128 YGGQTEVEYGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVEYGRRPESGLGSGYGGRSE 187

Query: 188 QVGYQKPSYGQSEEQ-EGYQKPSYGR----------PSYGQPEEQ 289
               +KPSYG+SEEQ EGY+KPSYGR          PSYG+ EEQ
Sbjct: 188 SEYERKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEQ 232


>gb|AAN60241.1| unknown [Arabidopsis thaliana]
          Length = 381

 Score =  118 bits (295), Expect = 6e-25
 Identities = 66/110 (60%), Positives = 81/110 (73%), Gaps = 14/110 (12%)
 Frame = +2

Query: 2   QKPSYGQSEEQ-EGYQKPSYGRPSYGQPEEQVGYQKPSYGQSEEQ-EGYQKPSYGRPSYG 175
           +KPSYG+SEEQ EGY+KPSYGR      E++ GY+KPSYG+SEEQ EGY+KPSYGR    
Sbjct: 192 RKPSYGRSEEQEEGYRKPSYGR----SEEQEEGYRKPSYGRSEEQEEGYRKPSYGR---S 244

Query: 176 QPEEQVGYQKPSYGQSEEQE--GYQKPSYGR----------PSYGQPEEQ 289
           + E++ GY+KPSYG+SEEQE   Y+KPSYGR          PSYG+ EEQ
Sbjct: 245 EEEQEEGYRKPSYGRSEEQEEGSYRKPSYGRSDDQVESYIKPSYGRSEEQ 294



 Score =  110 bits (276), Expect = 9e-23
 Identities = 70/126 (55%), Positives = 84/126 (66%), Gaps = 30/126 (23%)
 Frame = +2

Query: 2   QKPSYGQSEEQE-GYQKPSYGR----------PSYGQPEEQV--GYQKPSYGQSEEQE-- 136
           +KPSYG+SEEQE GY+KPSYGR          PSYG+ EE+   GY+KPSYG+SEEQE  
Sbjct: 207 RKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEEQEEGYRKPSYGRSEEQEEG 266

Query: 137 GYQKPSYGR----------PSYGQPEEQV--GYQKPSYGQSEEQE--GYQK-PSYGRPSY 271
            Y+KPSYGR          PSYG+ EEQ    Y+KPSYG+SEEQE   Y+K PSYGR + 
Sbjct: 267 SYRKPSYGRSDDQVESYIKPSYGRSEEQEEGSYRKPSYGRSEEQEEGSYRKQPSYGRGND 326

Query: 272 GQPEEQ 289
              +EQ
Sbjct: 327 DDDDEQ 332



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
 Frame = +2

Query: 14  YGQSEEQEGYQKP--SYGRPSYGQPEEQVGYQKPSYGQSEEQEGYQKPSYGRPSYGQPEE 187
           YG   E E  ++P  SYG    G+ E +  Y     G++E + G +  S     YG   E
Sbjct: 128 YGGQTEVEYGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVEYGRRPESGLGSGYGGRSE 187

Query: 188 QVGYQKPSYGQSEEQ-EGYQKPSYGR----------PSYGQPEEQ 289
               +KPSYG+SEEQ EGY+KPSYGR          PSYG+ EEQ
Sbjct: 188 SEYERKPSYGRSEEQEEGYRKPSYGRSEEQEEGYRKPSYGRSEEQ 232


>ref|XP_001770325.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162678356|gb|EDQ64815.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 388

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 20/115 (17%)
 Frame = +2

Query: 5   KPSYGQSEEQEGYQKPSYGRPSYGQPEEQVGYQK--PSYGQSEEQE-GYQK--PSYG--- 160
           +PSYG  EE+ GY+KP   RP+YG+ EE+ GY+K  PSYG+ E +E GY+K  PSYG   
Sbjct: 155 RPSYGGEEEESGYRKP---RPAYGEEEEESGYRKPRPSYGEEESEEGGYRKSRPSYGEEE 211

Query: 161 ---------RPSYGQPE-EQVGYQK--PSYGQSEEQEGYQKPSYGRPSYGQPEEQ 289
                    RPSYG+ E E+ GY+K  PSYG+ E +EG  + S  RPSYG+ E +
Sbjct: 212 SEEGGYRKSRPSYGEEESEEGGYRKSRPSYGEEESEEGGYRKS--RPSYGEEESE 264



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 55/115 (47%), Positives = 73/115 (63%), Gaps = 21/115 (18%)
 Frame = +2

Query: 5   KPSYGQSEEQEGYQKP--SYG------------RPSYGQPE-EQVGYQK--PSYGQSEEQ 133
           +P+YG+ EE+ GY+KP  SYG            RPSYG+ E E+ GY+K  PSYG+ E +
Sbjct: 171 RPAYGEEEEESGYRKPRPSYGEEESEEGGYRKSRPSYGEEESEEGGYRKSRPSYGEEESE 230

Query: 134 EGYQKPSYGRPSYGQPE-EQVGYQK--PSYGQSEEQE-GYQKPSYGRPSYGQPEE 286
           EG  + S  RPSYG+ E E+ GY+K  PSYG+ E +E GY+KP   +P YG  EE
Sbjct: 231 EGGYRKS--RPSYGEEESEEGGYRKSRPSYGEEESEEGGYRKP---KPKYGDDEE 280



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 19/114 (16%)
 Frame = +2

Query: 5   KPSYGQSEEQEG-YQK--PSYG------------RPSYGQPE-EQVGYQK--PSYGQSEE 130
           +PSYG+ E +EG Y+K  PSYG            RPSYG+ E E+ GY+K  PSYG+ E 
Sbjct: 204 RPSYGEEESEEGGYRKSRPSYGEEESEEGGYRKSRPSYGEEESEEGGYRKSRPSYGEEES 263

Query: 131 QEG-YQKPSYGRPSYGQPEEQVGYQKPSYGQSEEQEGYQKPSYGRPSYGQPEEQ 289
           +EG Y+KP   +P YG  EE   Y++  YG+ EE+ GY++P   +P+Y + E +
Sbjct: 264 EEGGYRKP---KPKYGDDEEVSDYRRSGYGE-EEESGYREP---KPTYNEEESE 310



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 17/93 (18%)
 Frame = +2

Query: 62  RPSYGQPEEQVGYQKPSYGQSEEQEGYQKPSYGRPSYGQPEEQVGYQK--PSYGQSEEQE 235
           RPS  + +   G  +PSYG  EE+ GY+KP   RP+YG+ EE+ GY+K  PSYG+ E +E
Sbjct: 141 RPSEDEAQPDYGRHRPSYGGEEEESGYRKP---RPAYGEEEEESGYRKPRPSYGEEESEE 197

Query: 236 -GYQK--PSYG------------RPSYGQPEEQ 289
            GY+K  PSYG            RPSYG+ E +
Sbjct: 198 GGYRKSRPSYGEEESEEGGYRKSRPSYGEEESE 230


>ref|ZP_09790347.1| hypothetical protein GOOTI_169_00100 [Gordonia otitidis NBRC
           100426] gi|377521954|dbj|GAB35512.1| hypothetical
           protein GOOTI_169_00100 [Gordonia otitidis NBRC 100426]
          Length = 292

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
 Frame = +2

Query: 5   KPSYGQSEEQEGYQKPSYGRPSYGQPEE-QVGYQKPSYGQSE-EQEGYQKPSYGRPSYGQ 178
           +P+ GQS     Y++PSY +P+YGQP   Q GY +P YGQ   EQ  Y +P YG+P YGQ
Sbjct: 115 EPAPGQSP----YEQPSYDQPTYGQPPTAQPGYGQPGYGQPPYEQTAYGQPGYGQPEYGQ 170

Query: 179 PEEQVGYQKPSYGQSEEQEGYQKPSYGRPSYGQP 280
           P    GY +P YGQ      Y +P+YG+P YGQP
Sbjct: 171 P----GYGQPEYGQP----AYGQPAYGQPEYGQP 196



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
 Frame = +2

Query: 2   QKPSYGQSEEQ-EGYQKPSYGR-PSYGQPEEQVGYQKPSYGQSEEQEGYQKPSYGRPSYG 175
           Q P YG + +     Q P YG  P YG P    G  + S   +  Q  Y++PSY +P+YG
Sbjct: 78  QAPQYGSTPDYGSAGQAPQYGSTPDYGTPH---GSGQTSGEPAPGQSPYEQPSYDQPTYG 134

Query: 176 QPEE-QVGYQKPSYGQ------SEEQEGYQKPSYGRPSYGQPE 283
           QP   Q GY +P YGQ      +  Q GY +P YG+P YGQPE
Sbjct: 135 QPPTAQPGYGQPGYGQPPYEQTAYGQPGYGQPEYGQPGYGQPE 177



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
 Frame = +2

Query: 5   KPSYGQSE-EQEGYQKPSYGRPSYGQPEEQVGYQKPSYGQ-SEEQEGYQKPSYGRPSYG 175
           +P YGQ   EQ  Y +P YG+P YGQP    GY +P YGQ +  Q  Y +P YG+P YG
Sbjct: 145 QPGYGQPPYEQTAYGQPGYGQPEYGQP----GYGQPEYGQPAYGQPAYGQPEYGQPGYG 199


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