BLASTX nr result

ID: Coptis21_contig00002638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002638
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547330.1| PREDICTED: protein KRI1 homolog [Glycine max]      91   5e-29
ref|XP_002326616.1| predicted protein [Populus trichocarpa] gi|2...    87   6e-29
ref|XP_003535100.1| PREDICTED: protein KRI1 homolog [Glycine max]      87   1e-28
ref|NP_001055896.1| Os05g0490000 [Oryza sativa Japonica Group] g...    91   1e-27
ref|XP_002514828.1| Trichohyalin, putative [Ricinus communis] gi...    90   1e-27

>ref|XP_003547330.1| PREDICTED: protein KRI1 homolog [Glycine max]
          Length = 682

 Score = 91.3 bits (225), Expect(3) = 5e-29
 Identities = 46/82 (56%), Positives = 57/82 (69%)
 Frame = -1

Query: 282 EQGEEDLPGESKRKKKHKIPLQEKVHLDKELEKYYKLDYEDTIEDLKTRFKYTSVPSRRF 103
           ++ EE +P E  RK+K K  L EK      +++YYKLDYEDTI DLKTRFKY      RF
Sbjct: 494 DEKEEKIPEEGSRKRKRKTALLEKAR-QAMMDEYYKLDYEDTIGDLKTRFKYAKTKPSRF 552

Query: 102 GLSPAEMLMMDETELNQYVSEK 37
           GLS +E+L+MD+ ELNQYVS K
Sbjct: 553 GLSASEILLMDDKELNQYVSLK 574



 Score = 60.8 bits (146), Expect(3) = 5e-29
 Identities = 37/79 (46%), Positives = 39/79 (49%)
 Frame = -3

Query: 547 DPEEYDRKMNETFDVDYYQAEEIXXXXXXXXXXXXXXXXXXDFHKEDELLGHPKD*GVGG 368
           DPEEYDR M + FD  YY A +                    F KEDELLG PK     G
Sbjct: 391 DPEEYDRMMKKAFDEKYYNAVDADPDFCSDIDDNEKPD----FEKEDELLGLPKGWDACG 446

Query: 367 SGDGFWAAREKVLKLKAEN 311
           S  GF AAREK LK K EN
Sbjct: 447 SNGGFLAAREKALKEKIEN 465



 Score = 21.2 bits (43), Expect(3) = 5e-29
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 50  MSLKKLAPYSSLQGK 6
           +SLKKLAPY   + K
Sbjct: 571 VSLKKLAPYQEEEWK 585


>ref|XP_002326616.1| predicted protein [Populus trichocarpa] gi|222833938|gb|EEE72415.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score = 86.7 bits (213), Expect(3) = 6e-29
 Identities = 46/82 (56%), Positives = 57/82 (69%)
 Frame = -1

Query: 282 EQGEEDLPGESKRKKKHKIPLQEKVHLDKELEKYYKLDYEDTIEDLKTRFKYTSVPSRRF 103
           E   E+   ESKRK+K K+ L +KV  ++ +E+YYKLDYE TI DLKTRFKY  V   +F
Sbjct: 445 EGSGEERSEESKRKRKRKMSLVQKVK-EEMMEEYYKLDYEGTIGDLKTRFKYAKVDPNKF 503

Query: 102 GLSPAEMLMMDETELNQYVSEK 37
           GL   E+L MD+ ELNQYVS K
Sbjct: 504 GLKTEEILEMDDKELNQYVSIK 525



 Score = 65.9 bits (159), Expect(3) = 6e-29
 Identities = 36/78 (46%), Positives = 45/78 (57%)
 Frame = -3

Query: 547 DPEEYDRKMNETFDVDYYQAEEIXXXXXXXXXXXXXXXXXXDFHKEDELLGHPKD*GVGG 368
           DP+EYD+ M + FDV YY+AE++                   F KEDELLG PKD  +  
Sbjct: 360 DPDEYDKMMKKAFDVQYYEAEDVEPGFGSDDDNDEMEKPD--FDKEDELLGLPKDWDMID 417

Query: 367 SGDGFWAAREKVLKLKAE 314
           S DGF AARE+ LKLK +
Sbjct: 418 SSDGFLAARERSLKLKQQ 435



 Score = 20.4 bits (41), Expect(3) = 6e-29
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 50  MSLKKLAPYSSLQGK 6
           +S+KKLAPY   + K
Sbjct: 522 VSIKKLAPYMDKEWK 536


>ref|XP_003535100.1| PREDICTED: protein KRI1 homolog [Glycine max]
          Length = 648

 Score = 87.0 bits (214), Expect(3) = 1e-28
 Identities = 45/82 (54%), Positives = 54/82 (65%)
 Frame = -1

Query: 282 EQGEEDLPGESKRKKKHKIPLQEKVHLDKELEKYYKLDYEDTIEDLKTRFKYTSVPSRRF 103
           E   E     S RK+K K  L EK      +++YYKLDYEDTI DLKTRFKY    S RF
Sbjct: 461 EDENERFENTSSRKRKRKTALLEKAR-QAMMDEYYKLDYEDTIGDLKTRFKYAKTKSSRF 519

Query: 102 GLSPAEMLMMDETELNQYVSEK 37
           GLS +E+L+MD+ ELNQY+S K
Sbjct: 520 GLSASEILLMDDKELNQYISLK 541



 Score = 63.5 bits (153), Expect(3) = 1e-28
 Identities = 38/79 (48%), Positives = 40/79 (50%)
 Frame = -3

Query: 547 DPEEYDRKMNETFDVDYYQAEEIXXXXXXXXXXXXXXXXXXDFHKEDELLGHPKD*GVGG 368
           DPEEYDR M + FD  YY AE+                    F KEDELLG PK     G
Sbjct: 377 DPEEYDRMMKKAFDEKYYNAEDADLDFCSDIDDIEKPD----FEKEDELLGLPKGWDACG 432

Query: 367 SGDGFWAAREKVLKLKAEN 311
           S  GF AAREK LK K EN
Sbjct: 433 SNGGFLAAREKALKEKIEN 451



 Score = 21.2 bits (43), Expect(3) = 1e-28
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 50  MSLKKLAPYSSLQGK 6
           +SLKKLAPY   + K
Sbjct: 538 ISLKKLAPYQEEEWK 552


>ref|NP_001055896.1| Os05g0490000 [Oryza sativa Japonica Group]
           gi|50511370|gb|AAT77293.1| unknown protein, contains
           Krr1 , PF05178 [Oryza sativa Japonica Group]
           gi|113579447|dbj|BAF17810.1| Os05g0490000 [Oryza sativa
           Japonica Group] gi|222632051|gb|EEE64183.1| hypothetical
           protein OsJ_19015 [Oryza sativa Japonica Group]
          Length = 656

 Score = 90.5 bits (223), Expect(2) = 1e-27
 Identities = 47/81 (58%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = -1

Query: 276 GEEDLPGE-SKRKKKHKIPLQEKVHLDKELEKYYKLDYEDTIEDLKTRFKYTSVPSRRFG 100
           G++   GE + +K K KI L++KV L+KE+E+YYKLDYEDTI DLKTRFKY  V    FG
Sbjct: 475 GKDIANGEGTNQKMKGKISLKDKVELEKEMEEYYKLDYEDTIGDLKTRFKYKQVKPNSFG 534

Query: 99  LSPAEMLMMDETELNQYVSEK 37
           LS  E+L  D+ +LNQYVS K
Sbjct: 535 LSTYEILASDDKDLNQYVSMK 555



 Score = 57.8 bits (138), Expect(2) = 1e-27
 Identities = 36/82 (43%), Positives = 45/82 (54%)
 Frame = -3

Query: 547 DPEEYDRKMNETFDVDYYQAEEIXXXXXXXXXXXXXXXXXXDFHKEDELLGHPKD*GVGG 368
           DPEEYDRKM ETF+ +YY+A+++                  DF KEDELLG PKD  + G
Sbjct: 401 DPEEYDRKMKETFNDNYYEADDV---DPEFGSGEEIDLEKPDFDKEDELLGLPKDWALDG 457

Query: 367 SGDGFWAAREKVLKLKAENKDV 302
             DG  AA E   + K   KD+
Sbjct: 458 Q-DGSSAAAEGASQKKKGGKDI 478


>ref|XP_002514828.1| Trichohyalin, putative [Ricinus communis]
           gi|223545879|gb|EEF47382.1| Trichohyalin, putative
           [Ricinus communis]
          Length = 640

 Score = 89.7 bits (221), Expect(2) = 1e-27
 Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
 Frame = -1

Query: 282 EQGEE--DLPGESKRKKKHKIPLQEKVHLDKELEKYYKLDYEDTIEDLKTRFKYTSVPSR 109
           E+GEE  +   ESKRK+K K+ L +KV  ++ LE+YYKLDYE T+ DLKTRFKY  V   
Sbjct: 448 EKGEENEETNRESKRKRKRKMSLVQKVK-EEWLEEYYKLDYEGTVGDLKTRFKYAKVQPE 506

Query: 108 RFGLSPAEMLMMDETELNQYVSEK 37
           R+GL   E+LM+D+ ELNQYVS K
Sbjct: 507 RYGLKTEEILMLDDQELNQYVSVK 530



 Score = 58.5 bits (140), Expect(2) = 1e-27
 Identities = 33/79 (41%), Positives = 43/79 (54%)
 Frame = -3

Query: 547 DPEEYDRKMNETFDVDYYQAEEIXXXXXXXXXXXXXXXXXXDFHKEDELLGHPKD*GVGG 368
           DPEEYD+ M + F+ DYY A+++                  DF KEDELLG PK      
Sbjct: 365 DPEEYDKMMKKAFNEDYYNADDLDPEFGSENDDDGVDIKKPDFDKEDELLGLPKG-WDAV 423

Query: 367 SGDGFWAAREKVLKLKAEN 311
             +GF A RE++L+ KAEN
Sbjct: 424 DNEGFLALRERILEQKAEN 442


Top