BLASTX nr result
ID: Coptis21_contig00002633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002633
(2208 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi... 967 0.0
gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. m... 966 0.0
sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease... 963 0.0
ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloropla... 963 0.0
emb|CAN78847.1| hypothetical protein VITISV_010724 [Vitis vinifera] 963 0.0
>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4A, chloroplastic-like [Vitis vinifera]
Length = 923
Score = 967 bits (2499), Expect = 0.0
Identities = 498/554 (89%), Positives = 517/554 (93%)
Frame = -3
Query: 1663 QVIRMXXXXXXXXXXXXXXXXXGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQ 1484
QVIRM GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQ
Sbjct: 227 QVIRMVGESTEAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQ 286
Query: 1483 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYR 1304
ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGKKVITLDMGLLVAGTKYR
Sbjct: 287 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYR 346
Query: 1303 GEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXILKPSLARGELQCIGA 1124
GEFEERLKKLMEEIKQSDEIILFIDEVHTL ILKP+LARGELQCIGA
Sbjct: 347 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGA 406
Query: 1123 TTLDEYRKHIEKDPALERRFQPVKVPEPSVEETVQILKGLRERYEIHHKLRYTDESLVAA 944
TTLDEYRKHIEKDPALERRFQPVKVPEPSV+ET+QILKGLRERYEIHHKLRYTDE+LV+A
Sbjct: 407 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVSA 466
Query: 943 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRNAQLPEEARELEKELRQITKEKNEAVRGQ 764
A+LSYQYISDRFLPDKAIDLIDEAGSRVRLR+AQLPEEARELEKELRQITKEKNEAVR Q
Sbjct: 467 ARLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQ 526
Query: 763 DFEKAGELRDREMDLKAQITSLIDKGKEKTKAESEASDSGPIVTEVDIQHIVSSWTGIPV 584
DFEKAGELRDREMDLKAQI++LIDKGKE TKAE+EA D GP+VTEVDIQHIVS+WTGIPV
Sbjct: 527 DFEKAGELRDREMDLKAQISTLIDKGKEMTKAETEAGDIGPMVTEVDIQHIVSAWTGIPV 586
Query: 583 DKVSSDESDKLLKMEDTLHQRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 404
+KVS+DESD+LLKME+TLH+R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG
Sbjct: 587 EKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 646
Query: 403 VGKSELAKTLAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 224
VGKSELAK LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR
Sbjct: 647 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 706
Query: 223 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 44
RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG
Sbjct: 707 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 766
Query: 43 GRRIGFDLDYDEKD 2
GRRIGFDLDYDEKD
Sbjct: 767 GRRIGFDLDYDEKD 780
>gb|ADN33858.1| ATP-dependent clp protease [Cucumis melo subsp. melo]
Length = 929
Score = 966 bits (2496), Expect = 0.0
Identities = 496/554 (89%), Positives = 516/554 (93%)
Frame = -3
Query: 1663 QVIRMXXXXXXXXXXXXXXXXXGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQ 1484
QVIRM GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQ
Sbjct: 234 QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQ 293
Query: 1483 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYR 1304
ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGKKVITLDMGLLVAGTKYR
Sbjct: 294 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYR 353
Query: 1303 GEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXILKPSLARGELQCIGA 1124
GEFEERLKKLMEEIKQSDEIILFIDEVHTL ILKP+LARGELQCIGA
Sbjct: 354 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGA 413
Query: 1123 TTLDEYRKHIEKDPALERRFQPVKVPEPSVEETVQILKGLRERYEIHHKLRYTDESLVAA 944
TTLDEYRKHIEKDPALERRFQPVKVPEPSV+ET+QILKGLRERYEIHHKLRYTDE+LVAA
Sbjct: 414 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAA 473
Query: 943 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRNAQLPEEARELEKELRQITKEKNEAVRGQ 764
AQLSYQYISDRFLPDKAIDL+DEAGSRVRLR+AQLPEEARELEKELRQITKEKNEAVR Q
Sbjct: 474 AQLSYQYISDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQ 533
Query: 763 DFEKAGELRDREMDLKAQITSLIDKGKEKTKAESEASDSGPIVTEVDIQHIVSSWTGIPV 584
DFEKAGELRDREM+LK +I++L+DKGKE +KAESEA D GP+VTEVDIQHIVSSWTGIPV
Sbjct: 534 DFEKAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPV 593
Query: 583 DKVSSDESDKLLKMEDTLHQRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 404
+KVS+DESD+LLKME+TLH+R+IGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG
Sbjct: 594 EKVSTDESDRLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 653
Query: 403 VGKSELAKTLAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 224
VGKSELAK LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR
Sbjct: 654 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 713
Query: 223 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 44
RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG
Sbjct: 714 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 773
Query: 43 GRRIGFDLDYDEKD 2
GRRIGFDLDYDEKD
Sbjct: 774 GRRIGFDLDYDEKD 787
>sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
homolog CD4B, chloroplastic; Flags: Precursor
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
[Solanum lycopersicum]
Length = 923
Score = 963 bits (2490), Expect = 0.0
Identities = 498/554 (89%), Positives = 514/554 (92%)
Frame = -3
Query: 1663 QVIRMXXXXXXXXXXXXXXXXXGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQ 1484
QVIRM G KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQ
Sbjct: 227 QVIRMVGESNEAVGASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQ 286
Query: 1483 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYR 1304
ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGKKVITLDMGLLVAGTKYR
Sbjct: 287 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYR 346
Query: 1303 GEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXILKPSLARGELQCIGA 1124
GEFEERLKKLMEEIKQSDEIILFIDEVHTL ILKP+LARGELQCIGA
Sbjct: 347 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGA 406
Query: 1123 TTLDEYRKHIEKDPALERRFQPVKVPEPSVEETVQILKGLRERYEIHHKLRYTDESLVAA 944
TTLDEYRKHIEKDPALERRFQPVKVPEP+V+ET+QILKGLRERYEIHHKLRYTDE LVAA
Sbjct: 407 TTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAA 466
Query: 943 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRNAQLPEEARELEKELRQITKEKNEAVRGQ 764
AQLSYQYISDRFLPDKAIDLIDEAGSRVRLR+AQLPEEA+ELEKELRQITKEKNEAVRGQ
Sbjct: 467 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQ 526
Query: 763 DFEKAGELRDREMDLKAQITSLIDKGKEKTKAESEASDSGPIVTEVDIQHIVSSWTGIPV 584
DFEKAGELRDREMDLKAQIT+LIDK KE +KAESEA+D+GP+VTE DIQHIVSSWTGIPV
Sbjct: 527 DFEKAGELRDREMDLKAQITALIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPV 586
Query: 583 DKVSSDESDKLLKMEDTLHQRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 404
+KVS+DESD+LLKME+TLH RIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG
Sbjct: 587 EKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 646
Query: 403 VGKSELAKTLAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 224
VGKSELAK LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR
Sbjct: 647 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 706
Query: 223 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 44
RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG
Sbjct: 707 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 766
Query: 43 GRRIGFDLDYDEKD 2
GRRIGFDLD DEKD
Sbjct: 767 GRRIGFDLDLDEKD 780
>ref|XP_004138021.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
sativus]
Length = 929
Score = 963 bits (2489), Expect = 0.0
Identities = 494/554 (89%), Positives = 516/554 (93%)
Frame = -3
Query: 1663 QVIRMXXXXXXXXXXXXXXXXXGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQ 1484
QVIRM GNKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQ
Sbjct: 234 QVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQ 293
Query: 1483 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYR 1304
ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGKKVITLDMGLLVAGTKYR
Sbjct: 294 ILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYR 353
Query: 1303 GEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXXXXXXXXXXILKPSLARGELQCIGA 1124
GEFEERLKKLMEEIKQSDEIILFIDEVHTL ILKP+LARGELQCIGA
Sbjct: 354 GEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGA 413
Query: 1123 TTLDEYRKHIEKDPALERRFQPVKVPEPSVEETVQILKGLRERYEIHHKLRYTDESLVAA 944
TTLDEYRKHIEKDPALERRFQPVKVPEPSV+ET+QILKGLRERYEIHHKLRYTDE+LVAA
Sbjct: 414 TTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLRYTDEALVAA 473
Query: 943 AQLSYQYISDRFLPDKAIDLIDEAGSRVRLRNAQLPEEARELEKELRQITKEKNEAVRGQ 764
AQLSYQYISDRFLPDKAIDL+DEAGSRVRLR+AQLPEEARELEKELRQITKEKNEAVR Q
Sbjct: 474 AQLSYQYISDRFLPDKAIDLVDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQ 533
Query: 763 DFEKAGELRDREMDLKAQITSLIDKGKEKTKAESEASDSGPIVTEVDIQHIVSSWTGIPV 584
DFEKAGELRDREM+LK +I++L+DKGKE +KAESEA D GP+VTEVDIQHIVSSWTGIPV
Sbjct: 534 DFEKAGELRDREMELKTKISALVDKGKEMSKAESEAGDVGPVVTEVDIQHIVSSWTGIPV 593
Query: 583 DKVSSDESDKLLKMEDTLHQRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTG 404
+KVS+DESD+LLKME+TLH+R+IGQDEAV+AISRAIRRARVGLKNPNRPIASFIFSGPTG
Sbjct: 594 EKVSTDESDRLLKMEETLHKRVIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTG 653
Query: 403 VGKSELAKTLAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 224
VGKSELAK LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR
Sbjct: 654 VGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRR 713
Query: 223 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 44
RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG
Sbjct: 714 RPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKG 773
Query: 43 GRRIGFDLDYDEKD 2
GRR+GFDLDYDEKD
Sbjct: 774 GRRMGFDLDYDEKD 787
>emb|CAN78847.1| hypothetical protein VITISV_010724 [Vitis vinifera]
Length = 890
Score = 963 bits (2489), Expect = 0.0
Identities = 491/531 (92%), Positives = 510/531 (96%)
Frame = -3
Query: 1594 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAI 1415
NKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAI
Sbjct: 217 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAI 276
Query: 1414 AEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 1235
AEGLAQRIA+GDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF
Sbjct: 277 AEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 336
Query: 1234 IDEVHTLXXXXXXXXXXXXXXILKPSLARGELQCIGATTLDEYRKHIEKDPALERRFQPV 1055
IDEVHTL ILKP+LARGELQCIGATTLDEYRKHIEKDPALERRFQPV
Sbjct: 337 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV 396
Query: 1054 KVPEPSVEETVQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRFLPDKAIDLIDE 875
KVPEPSV+ET+QI KGLRERYEIHHKLRYTDE+LV+AA+LSYQYISDRFLPDKAIDLIDE
Sbjct: 397 KVPEPSVDETIQIXKGLRERYEIHHKLRYTDEALVSAARLSYQYISDRFLPDKAIDLIDE 456
Query: 874 AGSRVRLRNAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITSLI 695
AGSRVRLR+AQLPEEARELEKELRQITKEKNEAVR QDFEKAGELRDREMDLKAQI++LI
Sbjct: 457 AGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMDLKAQISTLI 516
Query: 694 DKGKEKTKAESEASDSGPIVTEVDIQHIVSSWTGIPVDKVSSDESDKLLKMEDTLHQRII 515
DKGKE TKAE+EA D GP+VTEVDIQHIVS+WTGIPV+KVS+DESD+LLKME+TLH+R+I
Sbjct: 517 DKGKEMTKAETEAGDIGPMVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVI 576
Query: 514 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLAAYYFGSEEAMIR 335
GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LAAYYFGSEEAMIR
Sbjct: 577 GQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIR 636
Query: 334 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 155
LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML
Sbjct: 637 LDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMML 696
Query: 154 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 2
QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
Sbjct: 697 QILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD 747