BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002629
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282652.1| PREDICTED: ATP-dependent Clp protease proteo...   393   e-107
ref|XP_003534318.1| PREDICTED: ATP-dependent Clp protease proteo...   392   e-106
ref|XP_003517082.1| PREDICTED: ATP-dependent Clp protease proteo...   389   e-106
gb|AFK33568.1| unknown [Lotus japonicus]                              388   e-105
ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subun...   384   e-104

>ref|XP_002282652.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
           chloroplastic [Vitis vinifera]
          Length = 291

 Score =  393 bits (1009), Expect = e-107
 Identities = 195/220 (88%), Positives = 212/220 (96%)
 Frame = +1

Query: 247 SRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLS 426
           +RGA+ DAMGLLL+ERIVFLGN +DDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLS
Sbjct: 72  ARGAEADAMGLLLKERIVFLGNNVDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLS 131

Query: 427 ATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGASGQ 606
           ATMAIYD+VQLVRAD+ST+ALGI+ASTASIILGGGTKGKR AMPNTRIM+HQPLGGASGQ
Sbjct: 132 ATMAIYDIVQLVRADVSTVALGISASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQ 191

Query: 607 AIDVEIQAKEIMHNKNNVTRIISGFTGRNFEQVKKDIDRDRYMSPIEAVEYGIIDGVIDR 786
           AIDVEIQA+EIMHNK+NVT+II+GF+GR+FEQV+KDIDRDRYMSPIEAVEYGIID VIDR
Sbjct: 192 AIDVEIQAQEIMHNKSNVTKIIAGFSGRSFEQVEKDIDRDRYMSPIEAVEYGIIDAVIDR 251

Query: 787 DCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 906
           D IIPL+PVPEKVKSR NYEEI KDP KFLTPDIPDDEIY
Sbjct: 252 DSIIPLVPVPEKVKSRLNYEEISKDPRKFLTPDIPDDEIY 291


>ref|XP_003534318.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
           chloroplastic-like [Glycine max]
          Length = 306

 Score =  392 bits (1006), Expect = e-106
 Identities = 195/222 (87%), Positives = 210/222 (94%)
 Frame = +1

Query: 241 TASRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGS 420
           TA+RGA+ D MGLLLRERIVFLG+ IDDFVADAI+SQ+LLLDAQDPTKDIRLFINS GGS
Sbjct: 85  TAARGAEGDVMGLLLRERIVFLGSSIDDFVADAIMSQMLLLDAQDPTKDIRLFINSTGGS 144

Query: 421 LSATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGAS 600
           LSATMAIYD VQLVRAD+ST+ALGIAASTAS+ILGGGTKGKR AMPNTRIM+HQPLGGAS
Sbjct: 145 LSATMAIYDAVQLVRADVSTVALGIAASTASVILGGGTKGKRFAMPNTRIMIHQPLGGAS 204

Query: 601 GQAIDVEIQAKEIMHNKNNVTRIISGFTGRNFEQVKKDIDRDRYMSPIEAVEYGIIDGVI 780
           GQAIDVEIQAKE+MHNKNN+TRIIS FTGR+FEQV+KDIDRD+YMSPIEAVEYGIIDGVI
Sbjct: 205 GQAIDVEIQAKEVMHNKNNITRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEYGIIDGVI 264

Query: 781 DRDCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 906
           DRD IIPLMPVPE+VKS  NYEEI KDP KFLTPDIPDDEIY
Sbjct: 265 DRDSIIPLMPVPERVKSTLNYEEISKDPRKFLTPDIPDDEIY 306


>ref|XP_003517082.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 4,
           chloroplastic-like [Glycine max]
          Length = 306

 Score =  389 bits (1000), Expect = e-106
 Identities = 195/222 (87%), Positives = 209/222 (94%)
 Frame = +1

Query: 241 TASRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGS 420
           TA+RGA+ D MGLLLRERIVFLG+ IDDFVADAI+SQLLLLDA DPTKDIRLFINS GGS
Sbjct: 85  TAARGAEGDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDALDPTKDIRLFINSTGGS 144

Query: 421 LSATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGAS 600
           LSATMAIYD VQLVRAD+ST+ALGIAASTAS+ILGGGTKGKR AMPNTRIM+HQPLGGAS
Sbjct: 145 LSATMAIYDAVQLVRADVSTVALGIAASTASVILGGGTKGKRFAMPNTRIMVHQPLGGAS 204

Query: 601 GQAIDVEIQAKEIMHNKNNVTRIISGFTGRNFEQVKKDIDRDRYMSPIEAVEYGIIDGVI 780
           GQAIDVEIQAKE+MHNKNN+TRIIS FTGR+FEQV+KDIDRD+YMSPIEAVEYGIIDGVI
Sbjct: 205 GQAIDVEIQAKEVMHNKNNITRIISSFTGRSFEQVQKDIDRDKYMSPIEAVEYGIIDGVI 264

Query: 781 DRDCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 906
           DRD IIPLMPVPE+VKS  NYEEI KDP KFLTPDIPDDEIY
Sbjct: 265 DRDSIIPLMPVPERVKSTLNYEEISKDPRKFLTPDIPDDEIY 306


>gb|AFK33568.1| unknown [Lotus japonicus]
          Length = 308

 Score =  388 bits (997), Expect = e-105
 Identities = 196/222 (88%), Positives = 210/222 (94%)
 Frame = +1

Query: 241 TASRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGS 420
           TA RGA+TDAM LLLRERIVFLG+ IDDFVADAI+SQLLLLDAQDP+KDI+LFINSPGGS
Sbjct: 87  TAIRGAETDAMWLLLRERIVFLGSGIDDFVADAIMSQLLLLDAQDPSKDIKLFINSPGGS 146

Query: 421 LSATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGAS 600
           LSATMAIYD VQLVRAD+STIALGIAASTASIILGGGTKGKR AMPNTRIM+HQPLGGAS
Sbjct: 147 LSATMAIYDAVQLVRADVSTIALGIAASTASIILGGGTKGKRFAMPNTRIMIHQPLGGAS 206

Query: 601 GQAIDVEIQAKEIMHNKNNVTRIISGFTGRNFEQVKKDIDRDRYMSPIEAVEYGIIDGVI 780
           GQAIDVEIQAKE+MHNKNNVTRIISGFTGR FEQV+KDIDRDRYMSPIEAVEYGIIDGVI
Sbjct: 207 GQAIDVEIQAKEVMHNKNNVTRIISGFTGRTFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 266

Query: 781 DRDCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 906
           D++ IIPL PVPE+V+S  NYEEI KDP KFLTP+IPDDEIY
Sbjct: 267 DKESIIPLEPVPERVRSTLNYEEISKDPRKFLTPEIPDDEIY 308


>ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
           communis] gi|223540927|gb|EEF42485.1| ATP-dependent Clp
           protease proteolytic subunit, putative [Ricinus
           communis]
          Length = 294

 Score =  384 bits (985), Expect = e-104
 Identities = 194/222 (87%), Positives = 206/222 (92%)
 Frame = +1

Query: 241 TASRGADTDAMGLLLRERIVFLGNQIDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGS 420
           TA RGA++DAMGLLLRERIVFLGN IDDFVADA ISQLLLLDAQDPTKDIRLFIN PGGS
Sbjct: 73  TAMRGAESDAMGLLLRERIVFLGNNIDDFVADATISQLLLLDAQDPTKDIRLFINCPGGS 132

Query: 421 LSATMAIYDVVQLVRADISTIALGIAASTASIILGGGTKGKRLAMPNTRIMLHQPLGGAS 600
           LSATMAIYDVVQLVRAD+ST+ALGI+ASTASIILGGGTKGKR AMPNTRIM+HQPLGGAS
Sbjct: 133 LSATMAIYDVVQLVRADVSTVALGISASTASIILGGGTKGKRFAMPNTRIMVHQPLGGAS 192

Query: 601 GQAIDVEIQAKEIMHNKNNVTRIISGFTGRNFEQVKKDIDRDRYMSPIEAVEYGIIDGVI 780
           GQAIDVEIQA+EIMHNKNNV RIISGFTGR  EQV KDIDRDRYMSPIEAVEYGIIDGVI
Sbjct: 193 GQAIDVEIQAREIMHNKNNVVRIISGFTGRTVEQVLKDIDRDRYMSPIEAVEYGIIDGVI 252

Query: 781 DRDCIIPLMPVPEKVKSRYNYEEIGKDPMKFLTPDIPDDEIY 906
           D D IIPL PVPE+VK   +YEE+ KDPMKFLTPD+PDDEI+
Sbjct: 253 DGDSIIPLAPVPERVKPTLSYEEMRKDPMKFLTPDVPDDEIF 294