BLASTX nr result

ID: Coptis21_contig00002626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002626
         (1433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269360.1| PREDICTED: peroxisome biogenesis protein 19-...   337   4e-90
ref|XP_002304276.1| predicted protein [Populus trichocarpa] gi|2...   331   3e-88
ref|NP_001236156.1| uncharacterized protein LOC100500051 [Glycin...   330   4e-88
ref|XP_003608711.1| Peroxisomal biogenesis factor [Medicago trun...   329   1e-87
ref|XP_004147208.1| PREDICTED: peroxisome biogenesis protein 19-...   325   1e-86

>ref|XP_002269360.1| PREDICTED: peroxisome biogenesis protein 19-1 [Vitis vinifera]
           gi|297741197|emb|CBI31928.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  337 bits (865), Expect = 4e-90
 Identities = 167/218 (76%), Positives = 192/218 (88%), Gaps = 1/218 (0%)
 Frame = +3

Query: 177 KDNEEAKVGSKACLPTGVQGLGGGLPDLRSKKKGKQKALKENHVTEALEKLREQTRETVR 356
           +D  E K G+ + +P GVQGLG GLPDL+SKKKGKQK  KE+HV EAL+KLREQTRE V+
Sbjct: 30  RDGTEQKQGTGS-MPPGVQGLGMGLPDLKSKKKGKQKVSKESHVAEALDKLREQTREAVK 88

Query: 357 GLES-TAYKPKAGGDDDLGKEGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEP 533
            LES T  +P   G D+LGK+ MMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEP
Sbjct: 89  ELESVTGAQP---GGDELGKDAMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEP 145

Query: 534 MKEIGQRYPKWLEEHKSGLSKEEYDRYSHQYELIKNLNEVYENDPGNYSKIVDLMQKMQE 713
           MKEIG+RYPKWL+EH++GLSKEE++RYSHQY LIKNLNEVYENDPGN++KIV+LMQ+MQE
Sbjct: 146 MKEIGERYPKWLKEHEAGLSKEEFERYSHQYGLIKNLNEVYENDPGNFTKIVELMQQMQE 205

Query: 714 CGQPPNDIVKELAPDLDLTNLAQLSPEMLETQSNCCVM 827
           CGQPPNDIV+ELAPD DL NL QLSPE+LE+Q NCC+M
Sbjct: 206 CGQPPNDIVQELAPDFDLANLGQLSPELLESQPNCCLM 243


>ref|XP_002304276.1| predicted protein [Populus trichocarpa] gi|222841708|gb|EEE79255.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  331 bits (849), Expect = 3e-88
 Identities = 161/215 (74%), Positives = 183/215 (85%)
 Frame = +3

Query: 183 NEEAKVGSKACLPTGVQGLGGGLPDLRSKKKGKQKALKENHVTEALEKLREQTRETVRGL 362
           N++ K      LPTGVQGLG GLPDL+SKKKGKQK  KE+HV EAL+KLREQTRE V+GL
Sbjct: 40  NQKEKQTCLPSLPTGVQGLGMGLPDLKSKKKGKQKVSKESHVEEALDKLREQTREAVKGL 99

Query: 363 ESTAYKPKAGGDDDLGKEGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEPMKE 542
           ES     K    DD  ++  M+DWVKQFEELAGSQDMESIVETMMQQLLSKEILHEPMKE
Sbjct: 100 ESVTAASKP---DDSSQDAFMDDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEPMKE 156

Query: 543 IGQRYPKWLEEHKSGLSKEEYDRYSHQYELIKNLNEVYENDPGNYSKIVDLMQKMQECGQ 722
           IG+RYPKWLEEHK+ LSKE+++RYSHQYELIK+LN+VYENDP N++KI DLMQKMQECGQ
Sbjct: 157 IGERYPKWLEEHKASLSKEDHERYSHQYELIKDLNDVYENDPNNHTKIFDLMQKMQECGQ 216

Query: 723 PPNDIVKELAPDLDLTNLAQLSPEMLETQSNCCVM 827
           PPNDIV+ELAPD+D  NL QLSPEMLE+Q NCC+M
Sbjct: 217 PPNDIVQELAPDIDFANLGQLSPEMLESQGNCCIM 251


>ref|NP_001236156.1| uncharacterized protein LOC100500051 [Glycine max]
           gi|255628831|gb|ACU14760.1| unknown [Glycine max]
          Length = 244

 Score =  330 bits (847), Expect = 4e-88
 Identities = 163/205 (79%), Positives = 185/205 (90%), Gaps = 1/205 (0%)
 Frame = +3

Query: 216 LPTGVQGLGGGLPDLRSKKKGKQKAL-KENHVTEALEKLREQTRETVRGLESTAYKPKAG 392
           L +GVQGLG GLPDLR+KKKGKQKA  K++HV+EAL KLREQT+E V+GLES +  P A 
Sbjct: 44  LASGVQGLGMGLPDLRTKKKGKQKAASKDSHVSEALNKLREQTKEAVKGLESIS-TPTA- 101

Query: 393 GDDDLGKEGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEPMKEIGQRYPKWLE 572
             DDLGK+ +MEDWVKQFE+LAGSQDMESIVETMMQQLLSKEILHEPMKEI ++YPKWLE
Sbjct: 102 --DDLGKDALMEDWVKQFEQLAGSQDMESIVETMMQQLLSKEILHEPMKEIAEKYPKWLE 159

Query: 573 EHKSGLSKEEYDRYSHQYELIKNLNEVYENDPGNYSKIVDLMQKMQECGQPPNDIVKELA 752
           EHKS LSKEEYDRYSHQYELI+NLNEVY+NDPGN++KIV+L+QKMQECGQPPNDIV+ELA
Sbjct: 160 EHKSSLSKEEYDRYSHQYELIRNLNEVYDNDPGNFNKIVELIQKMQECGQPPNDIVQELA 219

Query: 753 PDLDLTNLAQLSPEMLETQSNCCVM 827
           PD DL +L QLSPEMLETQ NCC+M
Sbjct: 220 PDFDLASLGQLSPEMLETQPNCCIM 244


>ref|XP_003608711.1| Peroxisomal biogenesis factor [Medicago truncatula]
           gi|355509766|gb|AES90908.1| Peroxisomal biogenesis
           factor [Medicago truncatula]
          Length = 248

 Score =  329 bits (844), Expect = 1e-87
 Identities = 162/205 (79%), Positives = 180/205 (87%), Gaps = 1/205 (0%)
 Frame = +3

Query: 216 LPTGVQGLGGGLPDLRSKKKGKQKALKENHVTEALEKLREQTRETVRGLESTAYKPKAGG 395
           LP+GVQGLG GLPDL+SKKKGKQK  K+ HV+EAL KLREQT+E V+GLE         G
Sbjct: 44  LPSGVQGLGLGLPDLKSKKKGKQKVSKDAHVSEALNKLREQTKEAVKGLEFINPPGAGAG 103

Query: 396 DDDLGKEGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEPMKEIGQRYPKWLEE 575
            DDLGK+GMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEIL EPMKEIG+RYPKWLEE
Sbjct: 104 VDDLGKDGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILAEPMKEIGERYPKWLEE 163

Query: 576 HKSGLSKEEYDRYSHQYELIKNLNEVYENDPGNYSKIVDLMQKMQECGQPPNDIVKELAP 755
           HK+ LSKEEYDRYSHQYELI+NLNEVYE D GN++KIV+LMQKMQECGQPPNDIV+ELAP
Sbjct: 164 HKANLSKEEYDRYSHQYELIRNLNEVYEKDSGNFNKIVELMQKMQECGQPPNDIVQELAP 223

Query: 756 DLDLTNLAQLSPEMLE-TQSNCCVM 827
           D DL +L QLSPEML+ +Q NCC+M
Sbjct: 224 DFDLASLGQLSPEMLDGSQPNCCIM 248


>ref|XP_004147208.1| PREDICTED: peroxisome biogenesis protein 19-1-like [Cucumis
           sativus] gi|449504984|ref|XP_004162347.1| PREDICTED:
           peroxisome biogenesis protein 19-1-like [Cucumis
           sativus]
          Length = 237

 Score =  325 bits (834), Expect = 1e-86
 Identities = 161/208 (77%), Positives = 183/208 (87%)
 Frame = +3

Query: 204 SKACLPTGVQGLGGGLPDLRSKKKGKQKALKENHVTEALEKLREQTRETVRGLESTAYKP 383
           S+A LP+GVQGLG GLPDLRSKKKGKQK  KE+HV+EAL+KLREQTRE V+GLES +  P
Sbjct: 37  SRAVLPSGVQGLGMGLPDLRSKKKGKQKVSKESHVSEALDKLREQTREAVKGLESVS-GP 95

Query: 384 KAGGDDDLGKEGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILHEPMKEIGQRYPK 563
           K G D       +MEDWVKQFEE+AGSQDMESIVETMMQQLLSKEILHEPMKEIG+RYPK
Sbjct: 96  KPGED------ALMEDWVKQFEEMAGSQDMESIVETMMQQLLSKEILHEPMKEIGERYPK 149

Query: 564 WLEEHKSGLSKEEYDRYSHQYELIKNLNEVYENDPGNYSKIVDLMQKMQECGQPPNDIVK 743
           WLE+HK+ LSKEEY+RYS QY LIK+LN VYE +P N++KIV+LMQKMQECGQPPNDIV+
Sbjct: 150 WLEDHKASLSKEEYERYSQQYNLIKDLNIVYEREPDNFNKIVELMQKMQECGQPPNDIVQ 209

Query: 744 ELAPDLDLTNLAQLSPEMLETQSNCCVM 827
           ELAPD DL+NLAQLSPEMLE+Q NCC+M
Sbjct: 210 ELAPDFDLSNLAQLSPEMLESQPNCCIM 237


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