BLASTX nr result

ID: Coptis21_contig00002621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002621
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046343.1| Os02g0226000 [Oryza sativa Japonica Group] g...   279   1e-72
gb|EAY85073.1| hypothetical protein OsI_06429 [Oryza sativa Indi...   278   2e-72
gb|ACG35860.1| peroxisomal membrane protein PMP22 [Zea mays]          278   2e-72
gb|AFW71273.1| peroxisomal membrane protein PMP22 [Zea mays]          275   1e-71
ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71

>ref|NP_001046343.1| Os02g0226000 [Oryza sativa Japonica Group]
           gi|49388530|dbj|BAD25652.1| putative peroxisomal
           membrane protein 22 kDa [Oryza sativa Japonica Group]
           gi|113535874|dbj|BAF08257.1| Os02g0226000 [Oryza sativa
           Japonica Group] gi|125581366|gb|EAZ22297.1| hypothetical
           protein OsJ_05949 [Oryza sativa Japonica Group]
           gi|215768509|dbj|BAH00738.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 205

 Score =  279 bits (713), Expect = 1e-72
 Identities = 133/189 (70%), Positives = 154/189 (81%), Gaps = 3/189 (1%)
 Frame = -2

Query: 838 RRRGMSE---LAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXX 668
           R RG  E   LA++ W QY+ QLQ HPLRTK ITAG L+G+SDSVAQKLSG         
Sbjct: 14  RGRGEGEEGSLARRAWRQYLRQLQLHPLRTKMITAGCLAGVSDSVAQKLSGYQRIEKRRL 73

Query: 667 XXXXLFGFAYGGPFGHFLHKLLDKIFKGRKDKSTVAKKVFLEQLTSSPLNNLMFLMYYGL 488
               LFGFAYGGPFGHFLHK+LD IFKG+KD  T+AKKV LEQ+TSSP NNL+FL YYG 
Sbjct: 74  LLKMLFGFAYGGPFGHFLHKVLDYIFKGKKDTKTIAKKVLLEQITSSPWNNLLFLFYYGY 133

Query: 487 VVEGRPWVQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFL 308
           VVE RP+ +V+++VKK YPSVQL++WMFWPIVGW+NH+YMPLQFRVIFHSFVACCWGIFL
Sbjct: 134 VVERRPFKEVKTRVKKQYPSVQLSAWMFWPIVGWINHMYMPLQFRVIFHSFVACCWGIFL 193

Query: 307 NLRARSMAL 281
           NLRAR+M+L
Sbjct: 194 NLRARAMSL 202


>gb|EAY85073.1| hypothetical protein OsI_06429 [Oryza sativa Indica Group]
          Length = 206

 Score =  278 bits (711), Expect = 2e-72
 Identities = 133/190 (70%), Positives = 154/190 (81%), Gaps = 3/190 (1%)
 Frame = -2

Query: 841 RRRRGMSE---LAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXX 671
           R R G  E   LA++ W QY+ QLQ HPLRTK ITAG L+G+SDSVAQKLSG        
Sbjct: 14  RGRGGEGEEGSLARRAWRQYLRQLQLHPLRTKMITAGCLAGVSDSVAQKLSGYQRIEKRR 73

Query: 670 XXXXXLFGFAYGGPFGHFLHKLLDKIFKGRKDKSTVAKKVFLEQLTSSPLNNLMFLMYYG 491
                LFGFAYGGPFGHFLHK+LD IFKG+KD  T+AKKV LEQ+TSSP NNL+FL YYG
Sbjct: 74  LLLKMLFGFAYGGPFGHFLHKVLDYIFKGKKDTKTIAKKVLLEQITSSPWNNLLFLFYYG 133

Query: 490 LVVEGRPWVQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIF 311
            VVE RP+ +V+++VKK YPSVQL++WMFWPIVGW+NH+YMPLQFRVIFHSFVACCWGIF
Sbjct: 134 YVVERRPFKEVKTRVKKQYPSVQLSAWMFWPIVGWINHMYMPLQFRVIFHSFVACCWGIF 193

Query: 310 LNLRARSMAL 281
           LNLRAR+M+L
Sbjct: 194 LNLRARAMSL 203


>gb|ACG35860.1| peroxisomal membrane protein PMP22 [Zea mays]
          Length = 203

 Score =  278 bits (710), Expect = 2e-72
 Identities = 129/184 (70%), Positives = 150/184 (81%)
 Frame = -2

Query: 832 RGMSELAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXXXXXXL 653
           +G   LA++ W QY+LQLQ HPLRTK ITAG L+G+SDSVAQKLSG             L
Sbjct: 17  KGEGSLARRAWRQYLLQLQQHPLRTKMITAGCLAGVSDSVAQKLSGFQKIEKRRLLLKML 76

Query: 652 FGFAYGGPFGHFLHKLLDKIFKGRKDKSTVAKKVFLEQLTSSPLNNLMFLMYYGLVVEGR 473
           FGFAYGGPFGHFLHK+LD IF+G+KD  T+AKKV LEQ+TSSP NN++FL YYG VVE R
Sbjct: 77  FGFAYGGPFGHFLHKILDYIFQGKKDTKTIAKKVLLEQVTSSPWNNILFLFYYGYVVERR 136

Query: 472 PWVQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFLNLRAR 293
           P  +V ++VKK YPSVQL++WMFWPIVGW+NH YMPLQFRVIFHSFVACCWGIFLNLRAR
Sbjct: 137 PLKEVTTRVKKQYPSVQLSAWMFWPIVGWINHQYMPLQFRVIFHSFVACCWGIFLNLRAR 196

Query: 292 SMAL 281
           +M+L
Sbjct: 197 AMSL 200


>gb|AFW71273.1| peroxisomal membrane protein PMP22 [Zea mays]
          Length = 203

 Score =  275 bits (704), Expect = 1e-71
 Identities = 128/184 (69%), Positives = 149/184 (80%)
 Frame = -2

Query: 832 RGMSELAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXXXXXXL 653
           +G   LA++ W QY+LQLQ HPLRTK ITAG L+G+SDSVAQKLSG             L
Sbjct: 17  KGEGSLARRAWRQYLLQLQQHPLRTKMITAGCLAGVSDSVAQKLSGFQKIEKRRLLLKML 76

Query: 652 FGFAYGGPFGHFLHKLLDKIFKGRKDKSTVAKKVFLEQLTSSPLNNLMFLMYYGLVVEGR 473
           FGFAYGGPFGHFLHK+LD IF+G+KD  T+AKKV LEQ+TSSP NN++FL YYG VVE R
Sbjct: 77  FGFAYGGPFGHFLHKILDYIFQGKKDTKTIAKKVLLEQVTSSPWNNILFLFYYGYVVERR 136

Query: 472 PWVQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFLNLRAR 293
           P  +V ++VKK YPSVQL++WMFWPIV W+NH YMPLQFRVIFHSFVACCWGIFLNLRAR
Sbjct: 137 PLKEVTTRVKKQYPSVQLSAWMFWPIVSWINHQYMPLQFRVIFHSFVACCWGIFLNLRAR 196

Query: 292 SMAL 281
           +M+L
Sbjct: 197 AMSL 200


>ref|XP_002316547.1| predicted protein [Populus trichocarpa] gi|222859612|gb|EEE97159.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  275 bits (702), Expect = 2e-71
 Identities = 129/185 (69%), Positives = 154/185 (83%)
 Frame = -2

Query: 826 MSELAKKGWEQYMLQLQHHPLRTKAITAGVLSGISDSVAQKLSGIXXXXXXXXXXXXLFG 647
           M  +AKKG +QYMLQLQ HPLRTKAITAGVLS +SD V+QKLSGI            LFG
Sbjct: 1   MGSVAKKGLQQYMLQLQQHPLRTKAITAGVLSALSDIVSQKLSGIQKLQIKRILLKVLFG 60

Query: 646 FAYGGPFGHFLHKLLDKIFKGRKDKSTVAKKVFLEQLTSSPLNNLMFLMYYGLVVEGRPW 467
           F Y GPFGH+LH LLDK+FKG+KD +TVAKKV +EQLT+SP NNL+F++YYG+V++GRPW
Sbjct: 61  FGYLGPFGHYLHILLDKLFKGKKDTTTVAKKVAVEQLTASPWNNLVFMVYYGMVIDGRPW 120

Query: 466 VQVRSKVKKDYPSVQLTSWMFWPIVGWVNHLYMPLQFRVIFHSFVACCWGIFLNLRARSM 287
           +QV++K+KK+YP+VQ TSW FWP+VGWVNH Y+P QFRVIFHS +A  WGIFLNLRARSM
Sbjct: 121 LQVKTKLKKEYPAVQFTSWTFWPVVGWVNHQYIPQQFRVIFHSLIAVGWGIFLNLRARSM 180

Query: 286 ALTKG 272
           ALTKG
Sbjct: 181 ALTKG 185


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