BLASTX nr result

ID: Coptis21_contig00002615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002615
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520082.1| conserved hypothetical protein [Ricinus comm...   158   7e-37
ref|XP_002270877.1| PREDICTED: uncharacterized protein LOC100249...   155   5e-36
ref|XP_002319245.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35
gb|ABK93476.1| unknown [Populus trichocarpa]                          149   4e-34
ref|XP_002325872.1| predicted protein [Populus trichocarpa] gi|2...   148   8e-34

>ref|XP_002520082.1| conserved hypothetical protein [Ricinus communis]
           gi|223540846|gb|EEF42406.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  158 bits (400), Expect = 7e-37
 Identities = 88/138 (63%), Positives = 100/138 (72%), Gaps = 6/138 (4%)
 Frame = +2

Query: 68  RSRALGRPSRLAFQKK-----PNRKLTVRADYNDESRXXXXXXXXXXXXXXXXIFGTLAY 232
           +S + G+ SRLA Q+K      N  L+VRA+Y D +R                IFGTLAY
Sbjct: 25  KSLSFGKTSRLAVQRKLNLVGTNCNLSVRANYQDGNRGGGSDFVAGFLLGGA-IFGTLAY 83

Query: 233 IFAPQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKIGQLNSAIDNVSSRLRGGN 412
           +FAPQIRRS+LNEDEYGFR+AKRPIYYDEGLEKTRQTLNAKI QLNSAIDNVSSRLRGGN
Sbjct: 84  VFAPQIRRSLLNEDEYGFRKAKRPIYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGN 143

Query: 413 NIAKN-PIETDSEIEAAM 463
           N     P+ETD E+EA M
Sbjct: 144 NNPPTVPVETDPEVEATM 161


>ref|XP_002270877.1| PREDICTED: uncharacterized protein LOC100249521 [Vitis vinifera]
           gi|297737269|emb|CBI26470.3| unnamed protein product
           [Vitis vinifera]
          Length = 158

 Score =  155 bits (393), Expect = 5e-36
 Identities = 83/135 (61%), Positives = 98/135 (72%), Gaps = 3/135 (2%)
 Frame = +2

Query: 68  RSRALGRPSRLAFQKKPNR---KLTVRADYNDESRXXXXXXXXXXXXXXXXIFGTLAYIF 238
           +  + G+  RL  Q+K NR   KL+V A++N  ++                +FGTLAY+F
Sbjct: 25  KPNSFGKTPRLMIQRKSNRNVRKLSVCAEHNGGNKGGGGDFVAGFLLGGA-VFGTLAYVF 83

Query: 239 APQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKIGQLNSAIDNVSSRLRGGNNI 418
           APQIRRS+LNEDEYGFRRAKRP+YYDEGLEKTRQTLNAKI QLNSAIDNVSSRLRGGN+ 
Sbjct: 84  APQIRRSLLNEDEYGFRRAKRPMYYDEGLEKTRQTLNAKISQLNSAIDNVSSRLRGGNSS 143

Query: 419 AKNPIETDSEIEAAM 463
              PIETD E+EA M
Sbjct: 144 PSVPIETDPEVEATM 158


>ref|XP_002319245.1| predicted protein [Populus trichocarpa] gi|222857621|gb|EEE95168.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score =  154 bits (388), Expect = 2e-35
 Identities = 85/137 (62%), Positives = 94/137 (68%), Gaps = 5/137 (3%)
 Frame = +2

Query: 68  RSRALGRPSRLAFQKKPNR-----KLTVRADYNDESRXXXXXXXXXXXXXXXXIFGTLAY 232
           +S +  +  RLA  +K N      K  VRA+YND SR                +FGTLAY
Sbjct: 27  KSISFSKAPRLAIGRKSNLVGSSPKFAVRAEYNDGSRGGGGDFVAGFVLGGA-VFGTLAY 85

Query: 233 IFAPQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKIGQLNSAIDNVSSRLRGGN 412
           IFAPQIRRS+LNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKI QLNSAID VSSRLRGG 
Sbjct: 86  IFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKISQLNSAIDKVSSRLRGGK 145

Query: 413 NIAKNPIETDSEIEAAM 463
           N    P+E D E+EA M
Sbjct: 146 NSPPVPLEADPEVEATM 162


>gb|ABK93476.1| unknown [Populus trichocarpa]
          Length = 161

 Score =  149 bits (376), Expect = 4e-34
 Identities = 83/137 (60%), Positives = 95/137 (69%), Gaps = 5/137 (3%)
 Frame = +2

Query: 68  RSRALGRPSRLAFQKKPNR-----KLTVRADYNDESRXXXXXXXXXXXXXXXXIFGTLAY 232
           +S +L +   LA  +K N      KL VRA YND S                 +FGT+AY
Sbjct: 26  KSISLAKSPGLAVGRKSNPVGTSPKLAVRAQYNDGSSGGGGDFVAGFLLGGA-VFGTVAY 84

Query: 233 IFAPQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKIGQLNSAIDNVSSRLRGGN 412
           IFAPQIRRS+LNEDEYGFR+AKRPIYYDEGLEKTR+TLNAKI QLNSAID VSSRLRGGN
Sbjct: 85  IFAPQIRRSLLNEDEYGFRKAKRPIYYDEGLEKTRKTLNAKISQLNSAIDKVSSRLRGGN 144

Query: 413 NIAKNPIETDSEIEAAM 463
           N    P+E D+E+EA M
Sbjct: 145 NSPPVPLEADAEMEATM 161


>ref|XP_002325872.1| predicted protein [Populus trichocarpa] gi|222862747|gb|EEF00254.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  148 bits (374), Expect = 8e-34
 Identities = 83/137 (60%), Positives = 94/137 (68%), Gaps = 5/137 (3%)
 Frame = +2

Query: 68  RSRALGRPSRLAFQKKPNR-----KLTVRADYNDESRXXXXXXXXXXXXXXXXIFGTLAY 232
           +S +L +   LA  +K N      KL VRA YND S                 +FGT+AY
Sbjct: 26  KSISLAKSPGLAVGRKSNPVGTSPKLAVRAQYNDGSSGGGGDFVAGFLLGGA-VFGTVAY 84

Query: 233 IFAPQIRRSILNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKIGQLNSAIDNVSSRLRGGN 412
           IFAPQIRRS+LNEDEYGFR+AKRPIYYDEGLEKTR+TLNAKI QLNSAID VSSRLRGGN
Sbjct: 85  IFAPQIRRSLLNEDEYGFRKAKRPIYYDEGLEKTRKTLNAKISQLNSAIDKVSSRLRGGN 144

Query: 413 NIAKNPIETDSEIEAAM 463
           N    P+E D E+EA M
Sbjct: 145 NSPPVPLEADPEMEATM 161


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