BLASTX nr result

ID: Coptis21_contig00002612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002612
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47838.1| unknown [Medicago truncatula]                          206   8e-51
gb|ACJ84199.1| unknown [Medicago truncatula]                          206   8e-51
gb|ACJ85889.1| unknown [Medicago truncatula] gi|388497092|gb|AFK...   203   5e-50
sp|P24922.1|IF5A2_NICPL RecName: Full=Eukaryotic translation ini...   202   9e-50
gb|AFR23349.1| eukaryotic translation initiation factor 5A [Arac...   202   1e-49

>gb|AFK47838.1| unknown [Medicago truncatula]
          Length = 160

 Score =  206 bits (524), Expect = 8e-51
 Identities = 103/113 (91%), Positives = 109/113 (96%), Gaps = 1/113 (0%)
 Frame = -1

Query: 618 QVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 439
           +VVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Sbjct: 41  KVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 100

Query: 438 FVSLLTENGNTKDDLRLP-EEPLLTQITEGFAEGKDLVVTVMSSMGEEQISTL 283
           FVSLLTENGNTKDDL+LP ++ LLTQI EGFAEGKDLVV+VMSSMGEEQI+ L
Sbjct: 101 FVSLLTENGNTKDDLKLPTDDNLLTQIKEGFAEGKDLVVSVMSSMGEEQINAL 153


>gb|ACJ84199.1| unknown [Medicago truncatula]
          Length = 160

 Score =  206 bits (524), Expect = 8e-51
 Identities = 103/113 (91%), Positives = 109/113 (96%), Gaps = 1/113 (0%)
 Frame = -1

Query: 618 QVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 439
           +VVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Sbjct: 41  KVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 100

Query: 438 FVSLLTENGNTKDDLRLP-EEPLLTQITEGFAEGKDLVVTVMSSMGEEQISTL 283
           FVSLLTENGNTKDDL+LP ++ LLTQI EGFAEGKDLVV+VMSSMGEEQI+ L
Sbjct: 101 FVSLLTENGNTKDDLKLPTDDNLLTQIKEGFAEGKDLVVSVMSSMGEEQINAL 153


>gb|ACJ85889.1| unknown [Medicago truncatula] gi|388497092|gb|AFK36612.1| unknown
           [Medicago truncatula]
          Length = 160

 Score =  203 bits (517), Expect = 5e-50
 Identities = 101/113 (89%), Positives = 108/113 (95%), Gaps = 1/113 (0%)
 Frame = -1

Query: 618 QVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 439
           +VVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Sbjct: 41  KVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 100

Query: 438 FVSLLTENGNTKDDLRLP-EEPLLTQITEGFAEGKDLVVTVMSSMGEEQISTL 283
           FVSLLTENGNTKDDL+LP ++ LLTQI +GFAEGKDLVV+VMS+MGEEQI  L
Sbjct: 101 FVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICAL 153


>sp|P24922.1|IF5A2_NICPL RecName: Full=Eukaryotic translation initiation factor 5A-2;
           Short=eIF-5A-2; AltName: Full=eIF-4D
           gi|19702|emb|CAA45104.1| eukaryotic initiation factor 5A
           (2) [Nicotiana plumbaginifolia]
          Length = 159

 Score =  202 bits (515), Expect = 9e-50
 Identities = 101/113 (89%), Positives = 107/113 (94%), Gaps = 1/113 (0%)
 Frame = -1

Query: 618 QVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 439
           +VVEVSTSKTGKHGHAKCHFVAIDIFT KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Sbjct: 41  KVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 100

Query: 438 FVSLLTENGNTKDDLRLP-EEPLLTQITEGFAEGKDLVVTVMSSMGEEQISTL 283
           FVSLLTENGNTKDDLRLP ++ LLTQI +GFAEGKDLVV+VMS+MGEEQI  L
Sbjct: 101 FVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICAL 153


>gb|AFR23349.1| eukaryotic translation initiation factor 5A [Arachis hypogaea]
          Length = 160

 Score =  202 bits (513), Expect = 1e-49
 Identities = 100/113 (88%), Positives = 107/113 (94%), Gaps = 1/113 (0%)
 Frame = -1

Query: 618 QVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 439
           +VVEVSTSKTGKHGHAKCHFV IDIFT+KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG
Sbjct: 41  KVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDG 100

Query: 438 FVSLLTENGNTKDDLRLP-EEPLLTQITEGFAEGKDLVVTVMSSMGEEQISTL 283
           FVSLLTENGNTKDDLRLP ++ LLTQI +GFAEGKDLVV+VMS+MGEEQI  L
Sbjct: 101 FVSLLTENGNTKDDLRLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICAL 153


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