BLASTX nr result
ID: Coptis21_contig00002602
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002602
(2014 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote... 703 0.0
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera] 703 0.0
ref|XP_002531170.1| carbon catabolite repressor protein, putativ... 697 0.0
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1... 696 0.0
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2... 692 0.0
>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
product [Vitis vinifera]
Length = 603
Score = 703 bits (1815), Expect(2) = 0.0
Identities = 357/503 (70%), Positives = 392/503 (77%), Gaps = 22/503 (4%)
Frame = +2
Query: 179 RCFSDAWQHHRVLHDRXXXXXXXXXXXXXXXXXXXXXXXY-----------------NAS 307
+CFSDAWQHHRVLHDR N S
Sbjct: 96 KCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSTGSGSINTSLAPSASSASLANGS 155
Query: 308 APVYPVA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILT 481
AP+YP A +++ GE WFEVGRSKTYTPT DDIGHVLKFECV VDAETKL VGH ILT
Sbjct: 156 APLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVGHGSNILT 215
Query: 482 SRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCP 661
SRVIPAP+PTPR LI V G+DM HLD DG +S+GTFTVLSYNIL++V+AT+E YSYCP
Sbjct: 216 SRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGTFTVLSYNILSDVFATSELYSYCP 275
Query: 662 SWALSWSYRKQNLLREIVGYHADIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVS 841
SWALSW YRKQNLLREIVGY ADI+CLQE+QSDHFEEFFAPELDKHGYQALYK+KT EV
Sbjct: 276 SWALSWPYRKQNLLREIVGYRADIVCLQEIQSDHFEEFFAPELDKHGYQALYKRKTNEVY 335
Query: 842 NGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDN 1021
G HT+DGCATFFRR+RFSHVKKYEVEFNKAA SLTDA++ P +KT LNRL+KDN
Sbjct: 336 TGNIHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAVV---PSAQKKTALNRLVKDN 392
Query: 1022 VALIAVLEAKFNNHGTD--GKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASA 1195
VALIAVLEAKF+ G D GKRQLLCVANTH++V+Q+LKDVKLWQVHTLLKGLEKIAASA
Sbjct: 393 VALIAVLEAKFSYQGADIPGKRQLLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASA 452
Query: 1196 DIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSS 1375
DIPMLVCGDFNSVPGSAPHALLAMGKV+ MHPDL IDPLGI+ P +KL+HQLPLVSAYSS
Sbjct: 453 DIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLAIDPLGILRPASKLTHQLPLVSAYSS 512
Query: 1376 FARSRAP-GLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXX 1552
FAR GLEQQR R D +TNEPLFT+CTRDFI T+DYIFYTA+
Sbjct: 513 FARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIGTLDYIFYTADSLTVESLLELLDEDS 572
Query: 1553 XRKDTALPSPEWSSDHIALLAEF 1621
RKDTALPSPEWSSDHIALLAEF
Sbjct: 573 LRKDTALPSPEWSSDHIALLAEF 595
Score = 77.0 bits (188), Expect(2) = 0.0
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 1 KVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDA 123
KVAVCS+HP E ATLQCLGC+KAK+P KSYHCS +CFSDA
Sbjct: 61 KVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDA 101
>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
Length = 603
Score = 703 bits (1815), Expect(2) = 0.0
Identities = 357/503 (70%), Positives = 392/503 (77%), Gaps = 22/503 (4%)
Frame = +2
Query: 179 RCFSDAWQHHRVLHDRXXXXXXXXXXXXXXXXXXXXXXXY-----------------NAS 307
+CFSDAWQHHRVLHDR N S
Sbjct: 96 KCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSTGSGSINTSLAPSASSASLANGS 155
Query: 308 APVYPVA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILT 481
AP+YP A +++ GE WFEVGRSKTYTPT DDIGHVLKFECV VDAETKL VGH ILT
Sbjct: 156 APLYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVGHGSNILT 215
Query: 482 SRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCP 661
SRVIPAP+PTPR LI V G+DM HLD DG +S+GTFTVLSYNIL++V+AT+E YSYCP
Sbjct: 216 SRVIPAPSPTPRHLISVSGVDMVGHLDSDGRISSAGTFTVLSYNILSDVFATSELYSYCP 275
Query: 662 SWALSWSYRKQNLLREIVGYHADIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVS 841
SWALSW YRKQNLLREIVGY ADI+CLQE+QSDHFEEFFAPELDKHGYQALYK+KT EV
Sbjct: 276 SWALSWPYRKQNLLREIVGYRADIVCLQEIQSDHFEEFFAPELDKHGYQALYKRKTNEVY 335
Query: 842 NGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDN 1021
G HT+DGCATFFRR+RFSHVKKYEVEFNKAA SLTDA++ P +KT LNRL+KDN
Sbjct: 336 TGNIHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAVV---PSAQKKTALNRLVKDN 392
Query: 1022 VALIAVLEAKFNNHGTD--GKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASA 1195
VALIAVLEAKF+ G D GKRQLLCVANTH++V+Q+LKDVKLWQVHTLLKGLEKIAASA
Sbjct: 393 VALIAVLEAKFSYQGADIPGKRQLLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASA 452
Query: 1196 DIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSS 1375
DIPMLVCGDFNSVPGSAPHALLAMGKV+ MHPDL IDPLGI+ P +KL+HQLPLVSAYSS
Sbjct: 453 DIPMLVCGDFNSVPGSAPHALLAMGKVDPMHPDLAIDPLGILRPASKLTHQLPLVSAYSS 512
Query: 1376 FARSRAP-GLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXX 1552
FAR GLEQQR R D +TNEPLFT+CTRDFI T+DYIFYTA+
Sbjct: 513 FARMGVGIGLEQQRRRLDPSTNEPLFTHCTRDFIGTLDYIFYTADSLTVESLLELLDEDS 572
Query: 1553 XRKDTALPSPEWSSDHIALLAEF 1621
RKDTALPSPEWSSDHIALLAEF
Sbjct: 573 LRKDTALPSPEWSSDHIALLAEF 595
Score = 77.0 bits (188), Expect(2) = 0.0
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = +1
Query: 1 KVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDA 123
KVAVCS+HP E ATLQCLGC+KAK+P KSYHCS +CFSDA
Sbjct: 61 KVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDA 101
>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
gi|223529240|gb|EEF31213.1| carbon catabolite repressor
protein, putative [Ricinus communis]
Length = 603
Score = 697 bits (1799), Expect(2) = 0.0
Identities = 354/503 (70%), Positives = 394/503 (78%), Gaps = 22/503 (4%)
Frame = +2
Query: 179 RCFSDAWQHHRVLHDRXXXXXXXXXXXXXXXXXXXXXXXY-----------------NAS 307
+CFSDAWQHHRVLHDR N S
Sbjct: 96 KCFSDAWQHHRVLHDRAASAVSENGNDEEEVFGRFNSTGSGVLNTSLSSSASTASLTNGS 155
Query: 308 APVYP--VAEKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILT 481
AP+YP VA+++ GE WFEVGRSKTYTP+ DDIGHVLKFECV VDAE+KLPVGH ILT
Sbjct: 156 APLYPAAVAQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAESKLPVGHPNTILT 215
Query: 482 SRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCP 661
SRVIPAP+PTPRRLIPV GID+ HLD DG +SSGTFTVLSYNIL++VYAT+E+YSYCP
Sbjct: 216 SRVIPAPSPTPRRLIPVSGIDVMGHLDSDGRISSSGTFTVLSYNILSDVYATSETYSYCP 275
Query: 662 SWALSWSYRKQNLLREIVGYHADIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVS 841
SWALSW YR+QNLLREIVGY ADI+CLQEVQ+DH+EEFFAPELDKHGYQALYK+KT EV
Sbjct: 276 SWALSWPYRRQNLLREIVGYRADIVCLQEVQNDHYEEFFAPELDKHGYQALYKRKTNEVY 335
Query: 842 NGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDN 1021
+G + T+DGCATFFRR+RFSHVKKYEVEFNKAA SLT+A++ P RKT LNRL+KDN
Sbjct: 336 SGNSPTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEAVV---PSAQRKTALNRLVKDN 392
Query: 1022 VALIAVLEAKFNNHGTD--GKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASA 1195
VALI VLEAKF+N G D GKRQLLCVANTHV+++ DLKDVKLWQV TLLKGLEKIAASA
Sbjct: 393 VALIVVLEAKFSNQGADNPGKRQLLCVANTHVNIHHDLKDVKLWQVLTLLKGLEKIAASA 452
Query: 1196 DIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSS 1375
DIPMLVCGDFNS+PGSAPH+LLAMGKV+ +HPDL IDPLGI+ P +KL+HQLPLVSAYSS
Sbjct: 453 DIPMLVCGDFNSMPGSAPHSLLAMGKVDPLHPDLVIDPLGILRPHSKLTHQLPLVSAYSS 512
Query: 1376 FAR-SRAPGLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXX 1552
FAR GLEQQR R D TNEPLFT CTRDFI T+DYIFYTA+
Sbjct: 513 FARLGVGLGLEQQRRRMDPATNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEES 572
Query: 1553 XRKDTALPSPEWSSDHIALLAEF 1621
RKDTALPSPEWSSDHIALLAEF
Sbjct: 573 LRKDTALPSPEWSSDHIALLAEF 595
Score = 79.7 bits (195), Expect(2) = 0.0
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1
Query: 1 KVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDA 123
KVAVCS+HP EQATLQCLGC+KAK+P KSYHCS++CFSDA
Sbjct: 61 KVAVCSVHPSEQATLQCLGCVKAKIPVAKSYHCSTKCFSDA 101
>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
unknown [Populus trichocarpa] gi|222867975|gb|EEF05106.1|
predicted protein [Populus trichocarpa]
Length = 603
Score = 696 bits (1795), Expect(2) = 0.0
Identities = 353/503 (70%), Positives = 391/503 (77%), Gaps = 22/503 (4%)
Frame = +2
Query: 179 RCFSDAWQHHRVLHDRXXXXXXXXXXXXXXXXXXXXXXXY-----------------NAS 307
+CFSDAWQHHRVLHDR N S
Sbjct: 96 KCFSDAWQHHRVLHDRAASAINENGNEEEELFGRFNSSGSGVMNTSLSGSASSASLTNGS 155
Query: 308 APVYPVA--EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILT 481
P+YP A +++ GE WFEVGRSKTYTP+ DDIGHVLKFECV VDAETKLPVGH+ +LT
Sbjct: 156 TPLYPAAVTQRSGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPVGHSNTLLT 215
Query: 482 SRVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCP 661
SRVIPAP+PTPRRLI V G+D + LD DG +SSGTFTVLSYNIL++VYAT ++YSYCP
Sbjct: 216 SRVIPAPSPTPRRLISVSGLDAMAPLDSDGRISSSGTFTVLSYNILSDVYATNDTYSYCP 275
Query: 662 SWALSWSYRKQNLLREIVGYHADIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVS 841
SWALSW YR+QNLLREIVGY ADI+CLQEVQSDH+EEFFAPELDKHGYQALYK+KT EV
Sbjct: 276 SWALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFAPELDKHGYQALYKRKTNEVY 335
Query: 842 NGTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDN 1021
N HT+DGCATFFRR+RFSHVKKYEVEFNKAA SLTDAL+ P RKT LNRL+KDN
Sbjct: 336 NINTHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDALV---PSAQRKTALNRLVKDN 392
Query: 1022 VALIAVLEAKFNNHGTD--GKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASA 1195
VALI VLEAKF+N G D GKRQLLCVANTH++V+QDLKDVKLWQV TLLKGLEKIAASA
Sbjct: 393 VALIVVLEAKFSNQGADNPGKRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASA 452
Query: 1196 DIPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSS 1375
DIPMLVCGDFNSVPGSAPH+LLAMGKV+Q+HPDL +DPLGI+ P +KL+HQLPLVSAYSS
Sbjct: 453 DIPMLVCGDFNSVPGSAPHSLLAMGKVDQLHPDLVVDPLGILRPHSKLTHQLPLVSAYSS 512
Query: 1376 FAR-SRAPGLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXX 1552
FAR G +QQR R D TTNEPLFT CTRDFI T+DYIFYTA+
Sbjct: 513 FARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEES 572
Query: 1553 XRKDTALPSPEWSSDHIALLAEF 1621
RKDTALPSPEWSSDHIALLAEF
Sbjct: 573 LRKDTALPSPEWSSDHIALLAEF 595
Score = 77.8 bits (190), Expect(2) = 0.0
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +1
Query: 1 KVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDA 123
KVA+CS+HP EQATLQCLGC+KAK+P KSYHCS +CFSDA
Sbjct: 61 KVAICSVHPSEQATLQCLGCVKAKLPVAKSYHCSPKCFSDA 101
>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
predicted protein [Populus trichocarpa]
Length = 602
Score = 692 bits (1785), Expect(2) = 0.0
Identities = 353/502 (70%), Positives = 386/502 (76%), Gaps = 21/502 (4%)
Frame = +2
Query: 179 RCFSDAWQHHRVLHDRXXXXXXXXXXXXXXXXXXXXXXXY-----------------NAS 307
+CFSDAWQHHRVLHDR N S
Sbjct: 96 KCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRYNSSGSGVLNTSLSGSASSASLTNGS 155
Query: 308 APVYPVA-EKTSGEIWFEVGRSKTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTS 484
P+YP A + SGE WFEVGRSK YTP+ DDIGHVLKFECV VDAETKLPVGH +LTS
Sbjct: 156 TPLYPAAVTQRSGETWFEVGRSKIYTPSADDIGHVLKFECVVVDAETKLPVGHPNTLLTS 215
Query: 485 RVIPAPTPTPRRLIPVDGIDMTSHLDLDGHTASSGTFTVLSYNILAEVYATTESYSYCPS 664
RVIPAP+PTPRRLIPV G+D LDLDG +S+GTFTVLSYNIL++VYAT E+YSYCPS
Sbjct: 216 RVIPAPSPTPRRLIPVSGLDAMVPLDLDGRISSTGTFTVLSYNILSDVYATNETYSYCPS 275
Query: 665 WALSWSYRKQNLLREIVGYHADIICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSN 844
WALSW YR+QNLLREIVGY ADI+CLQEVQSDH+EEFFAPELDKHGYQALYK+KT EV
Sbjct: 276 WALSWPYRRQNLLREIVGYRADIVCLQEVQSDHYEEFFAPELDKHGYQALYKRKTNEVYA 335
Query: 845 GTAHTVDGCATFFRRERFSHVKKYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNV 1024
G HT+DGCATFFRR+RFSHVKKYEVEFNKAA SLTDAL+ P RKT LNRL+KDNV
Sbjct: 336 GNTHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDALV---PSAQRKTALNRLVKDNV 392
Query: 1025 ALIAVLEAKFNNHGTD--GKRQLLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASAD 1198
ALI VLEAKF+N G D GKRQLLCVANTH++V+QDLKDVKLWQV TLLKGLEKIAASAD
Sbjct: 393 ALIVVLEAKFSNQGVDNPGKRQLLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASAD 452
Query: 1199 IPMLVCGDFNSVPGSAPHALLAMGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSF 1378
IPMLVCGDFNSVPGSAPH+LLAMGKV+ +HPDL +DPLGI+ P KL+HQLPLVSAYSSF
Sbjct: 453 IPMLVCGDFNSVPGSAPHSLLAMGKVDPLHPDLVVDPLGILRPHNKLTHQLPLVSAYSSF 512
Query: 1379 AR-SRAPGLEQQRMRTDLTTNEPLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXX 1555
AR G +QQR R D TTNEPLFT CTRDFI +DYIFYTA+
Sbjct: 513 ARVGVGLGSDQQRRRMDATTNEPLFTNCTRDFIGALDYIFYTADSLMVESLLELLDEESL 572
Query: 1556 RKDTALPSPEWSSDHIALLAEF 1621
RKDTALPSPEWSSDHIALLAEF
Sbjct: 573 RKDTALPSPEWSSDHIALLAEF 594
Score = 76.3 bits (186), Expect(2) = 0.0
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = +1
Query: 1 KVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDA 123
KVAVCS+HP E ATLQC+GC+KAK+P KSYHCS +CFSDA
Sbjct: 61 KVAVCSVHPSEHATLQCIGCVKAKIPVAKSYHCSPKCFSDA 101