BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002580
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    53   1e-10
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...    47   6e-10
emb|CBI15337.3| unnamed protein product [Vitis vinifera]               52   1e-09
ref|NP_175760.1| F-box family protein [Arabidopsis thaliana] gi|...    46   1e-07
gb|AAF78435.1|AC018748_14 Contains similarity to a hypothetical ...    46   1e-07

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 52.8 bits (125), Expect(2) = 1e-10
 Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
 Frame = -2

Query: 840 GDNYTDIQSPAGLICYHALQEKS-IYICNPITWDRVKIPSENVGREVDF----GFGYAPL 676
           G N   + S  GL+C  + +  + + I NPIT   + +P E+V     F    G GY P 
Sbjct: 101 GRNLIVMSSCNGLLCLASEESPNPVIISNPITRKYIVLP-ESVNASYSFIQLVGLGYDPW 159

Query: 675 SKKYKYFQVSHGLQPNL*LSAAILTLGDGSWRKLALRFPIY----NSPFYSDGALYWVAS 508
           + KYK   V   +  +      I+TLG+ SWR+L +   +     + P Y +GALYW+  
Sbjct: 160 NMKYKV--VRSYIDNSKFTRFEIITLGEASWRQLDVPCRVVCGRNSRPIYCEGALYWILD 217

Query: 507 TVFCMD 490
             F  D
Sbjct: 218 KKFHYD 223



 Score = 40.8 bits (94), Expect(2) = 1e-10
 Identities = 24/73 (32%), Positives = 38/73 (52%)
 Frame = -1

Query: 1099 LNDLPVEILFEILSRLPLTSLLQAAKYTCKLWNNIIKDSLFPELHVARTLRNPGHLYSFT 920
            L +LP++I+ +ILS LP+  +L+  +  CK W  + KDS F +L   RT  +   L   +
Sbjct: 17   LLNLPLDIMADILSLLPIEDILRC-RSVCKTWYGLTKDSYFFKLQFRRTFYHMPRLMFIS 75

Query: 919  GYHNFFFCGEATQ 881
               N  F  +  Q
Sbjct: 76   KSENSVFLLDGKQ 88


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score = 47.4 bits (111), Expect(2) = 6e-10
 Identities = 26/68 (38%), Positives = 36/68 (52%)
 Frame = -1

Query: 1159 KRLRRQLEQYAHTCKKENKELNDLPVEILFEILSRLPLTSLLQAAKYTCKLWNNIIKDSL 980
            KR R +L  Y   C +E      LP EI  +ILSRLP+ ++ Q  K  CK W +++    
Sbjct: 3    KRYRTRL--YERKCLEEPSSTPTLPAEIFVDILSRLPVEAMTQ-CKSVCKSWRDLLSTPY 59

Query: 979  FPELHVAR 956
            F  LH A+
Sbjct: 60   FARLHFAK 67



 Score = 43.9 bits (102), Expect(2) = 6e-10
 Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
 Frame = -2

Query: 882 SDAIVGMKLRGDLGGDNYTD--IQSPAGLICYHALQ--EKSIYICNPITWDRVKI--PSE 721
           ++A+V M  +  L  + +    + S  GL+C   +   +K  YICNPIT + + I  P  
Sbjct: 99  NNAMVSMPTKFKLPKNTFRGKVVGSSNGLLCLSEIHRMKKKFYICNPITGEYIGIAGPKV 158

Query: 720 NVGREV--DFGFGYAPLSKKYKYF----QVSHGLQPNL*LSAAILTLGDGSWRKLALRFP 559
           + G  V    GF Y P +++ K      +V +G  P    S  I TLG  SWR + +   
Sbjct: 159 DQGWHVFEPIGFFYNPQNQQCKILMPRVRVGYGNFPG---SGQIFTLGSNSWRNIDIPGH 215

Query: 558 IY-NSPFYSDGALYWVAS 508
           ++       +G+L+W+++
Sbjct: 216 LHLIRAVPLNGSLHWIST 233


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 52.4 bits (124), Expect(2) = 1e-09
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
 Frame = -1

Query: 1243 EGSNLFRAMALL--KRHQEEAISGVSIPELK--RLRRQLEQYAHTCKKENKELNDLPVEI 1076
            EG  L     +L  KRH+     G +    K  ++R   +    +  K++  +NDL  E+
Sbjct: 99   EGGTLNPPFQMLRPKRHRTTKTDGHARSSKKGSQVRSSKKDGRASTTKKDGPVNDLLPEL 158

Query: 1075 LFEILSRLPLTSLLQAAKYTCKLWNNIIKDSLFPELHVARTLRNPGHL--------YSFT 920
            + EILSRLP+  +L+  +  CK WN++I+  LF  L   ++   P  +         + T
Sbjct: 159  ISEILSRLPIELILR-CRSVCKTWNSVIQSPLFINLQARKSHNQPSRVILKPIFGGVTAT 217

Query: 919  GYHNFFFCGEATQ*CNRWHEAPWRSGRRQL 830
              H+ F      +   R H+  WR    Q+
Sbjct: 218  TMHSLFLLDTEERKSRRIHDKSWRFSGLQI 247



 Score = 37.7 bits (86), Expect(2) = 1e-09
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
 Frame = -2

Query: 807 GLICYHALQEKS-IYICNPITWDRVKIPSENVGREV---DFGFGYAPLSKKYKYFQVSHG 640
           GL+C  +  E   +YI NPIT + V +PS   G  +     G G+   + KY   +    
Sbjct: 253 GLLCITSDSELGPVYISNPITREFVILPSPETGFSLLRHQVGLGFDSSNGKYIVVRAYTD 312

Query: 639 LQPNL*LSAAILTLGDGSWRKLALRFPI----YNSPFYSDGALYW 517
              +       + LG+ SWR L +   I     N   + +GAL+W
Sbjct: 313 KSKSQVNKFEAIMLGENSWRSLTVPDIIAECTINGSVFWNGALHW 357


>ref|NP_175760.1| F-box family protein [Arabidopsis thaliana]
           gi|374095391|sp|Q9LPH0.2|FB57_ARATH RecName:
           Full=Putative F-box protein At1g53550
           gi|332194837|gb|AEE32958.1| F-box family protein
           [Arabidopsis thaliana]
          Length = 408

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 18/158 (11%)
 Frame = -2

Query: 888 PHSDAIVGMKLRGDLGGDNYTDIQSPA-GLICYHALQEKSIY--ICNPITWDRVKIP--- 727
           P++ ++V   L+       ++ +  P  GLIC   ++E  ++  I NP T + + +P   
Sbjct: 106 PNNSSLVATSLQ-KTSSTRFSQLCRPVHGLICSQHIEENYLFALISNPTTGEYIALPKQR 164

Query: 726 -----SENVGREVDFGFGYAPLSKKYKYFQVS--HGLQPNL*LSAAILTLGDG--SWRK- 577
                SE +  +V + FGY P+ K++K  +++  H           +LTLG G  SWR  
Sbjct: 165 MEEMNSETIIEKVRYSFGYDPIDKQFKVLRITWLHRGSHEWSSEYQVLTLGFGNISWRNT 224

Query: 576 --LALRFPIYNSPFYSDGALYWVASTVFCMDETEYQVV 469
               + + + +S    +G LY+ A     +D  +Y +V
Sbjct: 225 QCCVVHYLLEDSGICINGVLYYPAR----LDNRKYTIV 258



 Score = 37.4 bits (85), Expect(2) = 1e-07
 Identities = 22/75 (29%), Positives = 38/75 (50%)
 Frame = -1

Query: 1123 TCKKENKELNDLPVEILFEILSRLPLTSLLQAAKYTCKLWNNIIKDSLFPELHVARTLRN 944
            T  KE    + +PV+++  ILSRL L  + +  +   KLW++II+   + +L   ++   
Sbjct: 24   TSGKETCYFDPIPVDLVINILSRLSLECIAR-CRCVSKLWSSIIRRPNYNQLFPVKSSAT 82

Query: 943  PGHLYSFTGYHNFFF 899
            P  L+ F      FF
Sbjct: 83   PRLLFVFKVARELFF 97


>gb|AAF78435.1|AC018748_14 Contains similarity to a hypothetical protein T28P16.4 gi|4589954
           from Arabidopsis thaliana BAC T28P16 gb|AC007169
           [Arabidopsis thaliana]
          Length = 390

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 18/158 (11%)
 Frame = -2

Query: 888 PHSDAIVGMKLRGDLGGDNYTDIQSPA-GLICYHALQEKSIY--ICNPITWDRVKIP--- 727
           P++ ++V   L+       ++ +  P  GLIC   ++E  ++  I NP T + + +P   
Sbjct: 106 PNNSSLVATSLQ-KTSSTRFSQLCRPVHGLICSQHIEENYLFALISNPTTGEYIALPKQR 164

Query: 726 -----SENVGREVDFGFGYAPLSKKYKYFQVS--HGLQPNL*LSAAILTLGDG--SWRK- 577
                SE +  +V + FGY P+ K++K  +++  H           +LTLG G  SWR  
Sbjct: 165 MEEMNSETIIEKVRYSFGYDPIDKQFKVLRITWLHRGSHEWSSEYQVLTLGFGNISWRNT 224

Query: 576 --LALRFPIYNSPFYSDGALYWVASTVFCMDETEYQVV 469
               + + + +S    +G LY+ A     +D  +Y +V
Sbjct: 225 QCCVVHYLLEDSGICINGVLYYPAR----LDNRKYTIV 258



 Score = 37.4 bits (85), Expect(2) = 1e-07
 Identities = 22/75 (29%), Positives = 38/75 (50%)
 Frame = -1

Query: 1123 TCKKENKELNDLPVEILFEILSRLPLTSLLQAAKYTCKLWNNIIKDSLFPELHVARTLRN 944
            T  KE    + +PV+++  ILSRL L  + +  +   KLW++II+   + +L   ++   
Sbjct: 24   TSGKETCYFDPIPVDLVINILSRLSLECIAR-CRCVSKLWSSIIRRPNYNQLFPVKSSAT 82

Query: 943  PGHLYSFTGYHNFFF 899
            P  L+ F      FF
Sbjct: 83   PRLLFVFKVARELFF 97