BLASTX nr result
ID: Coptis21_contig00002556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002556
(2117 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 771 0.0
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 770 0.0
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 769 0.0
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 760 0.0
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 757 0.0
>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 871
Score = 771 bits (1992), Expect = 0.0
Identities = 397/529 (75%), Positives = 437/529 (82%), Gaps = 16/529 (3%)
Frame = -3
Query: 1920 GVYIPPFKLRKDNVLLDD--DKSSVAYQRLTWDALRKSINGLVNKVNAANIKNIVPELFQ 1747
GVYIPPFK+ +++ + DKSSV YQRLTWDALRKSINGLVNKVNA NIKNI+PELF
Sbjct: 302 GVYIPPFKMA---MMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFA 358
Query: 1746 ENLIRGRGLFCRYIIKSQLASPQLTHVFAALVSVVNTKFPXXXXXXXXXXXXXXXRAYAR 1567
ENLIRGRGLFCR +KSQ+ASP T VFAALV+VVNTKFP RAY R
Sbjct: 359 ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKR 418
Query: 1566 NDKPQLLAATHFIAHLVNQEVAHXXXXXXXXXXXXLNPTYDSVEVAVGFITNCGSLLQDI 1387
NDKPQLLAA FIAHLVNQ+ AH PT DSVEVAVGF+T CGS+LQD+
Sbjct: 419 NDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDL 478
Query: 1386 SPKALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRRANFQGYPAVCPELDLVDREDQLT 1207
SPK LHGIFERFRGILHEGEIDKRVQFLIEGLFAIR+A FQGYPAV PELDLV++EDQ+T
Sbjct: 479 SPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQIT 538
Query: 1206 HELSLEDAIDPETSLDIFKEDSQFLENEKRYEELQRSILGE----DEVGSDQDSDD---- 1051
HE+SL++ IDPE SLDIFK D FLENEKRYEEL++S+LGE DE G D +SDD
Sbjct: 539 HEVSLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLGEESEDDEEGLDSESDDDDDE 598
Query: 1050 ------EEEANMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLSKIKLEQGQEMELC 889
EEE M+IKDETET+LVNLRRTIYLTIMSSVDFEEAGHKL KIKLE GQEMELC
Sbjct: 599 DDESDEEEEEQMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELC 658
Query: 888 IMLLECCSQERTYLRYYGLLGQRFCMLNEIHRENFETCFVKQYSSIHRLETNKMRNVAYF 709
IMLLECCSQERTYLRYYGLLGQRFCM+N++H+ENFE CFV+QYS IHRLETNK+RNV F
Sbjct: 659 IMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVGKF 718
Query: 708 FAHLLSTDALPWHVLSYIRLTEEDTTSSSRIFIKYLFQELNNVLGIRLLNKRLSDPLLQA 529
FAHLL TDALPWHVLSYIRLTEEDTTSSSRIFIK LFQEL+ LGIRLLN+RL+DP +Q
Sbjct: 719 FAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDPTMQE 778
Query: 528 SFESIFPKDNPKNTRFAINYLTSIGLGGITENLREYLKNMPGLIMQQKR 382
SFESIFPKDNPKNTRF IN+ TSIGLGG+TENLREYLKNMP LIMQQ++
Sbjct: 779 SFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQK 827
>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
Length = 785
Score = 770 bits (1988), Expect = 0.0
Identities = 397/533 (74%), Positives = 439/533 (82%), Gaps = 20/533 (3%)
Frame = -3
Query: 1920 GVYIPPFKLRKDNVLLDDDKSSVAYQRLTWDALRKSINGLVNKVNAANIKNIVPELFQEN 1741
GVYIPPFKL + + D KSS+ YQRLTWDALRKSINGLVNKVNA NIKNI+PELF EN
Sbjct: 206 GVYIPPFKLAQMMKEVQD-KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFGEN 264
Query: 1740 LIRGRGLFCRYIIKSQLASPQLTHVFAALVSVVNTKFPXXXXXXXXXXXXXXXRAYARND 1561
LIRGRGLFCR +KSQ+ASP T VFAALV+VVNTKFP RAY RND
Sbjct: 265 LIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLMRRIVLQFKRAYKRND 324
Query: 1560 KPQLLAATHFIAHLVNQEVAHXXXXXXXXXXXXLNPTYDSVEVAVGFITNCGSLLQDISP 1381
K QLLAA FIAHLVNQ+VAH NPT DSVEVAVGF+ CGS+LQD+SP
Sbjct: 325 KHQLLAAVKFIAHLVNQQVAHEIIALELLALMLENPTDDSVEVAVGFVKECGSILQDLSP 384
Query: 1380 KALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRRANFQGYPAVCPELDLVDREDQLTHE 1201
K LHGIFERFRGILHEGEIDKRVQFLIEGLFAIR+A FQG+PAV PELDLV++EDQLTHE
Sbjct: 385 KGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEQEDQLTHE 444
Query: 1200 LSLEDAIDPETSLDIFKEDSQFLENEKRYEELQRSILGE---DEVGSD------------ 1066
+SLE+ IDPE +LDIFK D QFLE+EKRYEEL+++ILGE DE GSD
Sbjct: 445 ISLEEKIDPEITLDIFKPDPQFLESEKRYEELKKTILGEESEDEAGSDAGSDDEDEDEDD 504
Query: 1065 -----QDSDDEEEANMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLSKIKLEQGQE 901
+D D+E+E MKIKDETET+LVNLRRTIYLTIMSS+DFEEAGHKL KIKLE GQE
Sbjct: 505 DEDDDEDDDEEDEQQMKIKDETETNLVNLRRTIYLTIMSSIDFEEAGHKLLKIKLEPGQE 564
Query: 900 MELCIMLLECCSQERTYLRYYGLLGQRFCMLNEIHRENFETCFVKQYSSIHRLETNKMRN 721
MELCIMLLECCSQERTYLRYYGLLGQRFCM+N++H+ENFE CFV+QYS IHRLETNK+RN
Sbjct: 565 MELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRN 624
Query: 720 VAYFFAHLLSTDALPWHVLSYIRLTEEDTTSSSRIFIKYLFQELNNVLGIRLLNKRLSDP 541
VA FFAHLL TDALPWHVL+YIRLTEEDTTSSSRIFIK LFQEL+ LGIRLLN+RL+DP
Sbjct: 625 VAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDP 684
Query: 540 LLQASFESIFPKDNPKNTRFAINYLTSIGLGGITENLREYLKNMPGLIMQQKR 382
+Q SFESIFPKDNPKNTRF+IN+ TSIGLGGITENLREYLKNMP LIMQQ++
Sbjct: 685 SMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQK 737
>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 860
Score = 769 bits (1986), Expect = 0.0
Identities = 394/528 (74%), Positives = 436/528 (82%), Gaps = 15/528 (2%)
Frame = -3
Query: 1920 GVYIPPFKLRKDNVLLDD--DKSSVAYQRLTWDALRKSINGLVNKVNAANIKNIVPELFQ 1747
GVYIPPFK+ +++ + DKSSV YQRLTWDALRKSINGLVNKVNA NIKNI+PELF
Sbjct: 286 GVYIPPFKMA---MMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFA 342
Query: 1746 ENLIRGRGLFCRYIIKSQLASPQLTHVFAALVSVVNTKFPXXXXXXXXXXXXXXXRAYAR 1567
ENLIRGRGLFCR +KSQ+ASP T VFAALV+VVNTKFP RAY R
Sbjct: 343 ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKR 402
Query: 1566 NDKPQLLAATHFIAHLVNQEVAHXXXXXXXXXXXXLNPTYDSVEVAVGFITNCGSLLQDI 1387
NDKPQLLAA FIAHLVNQ+ AH PT DSVEVAVGF+T CGS+LQD+
Sbjct: 403 NDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDL 462
Query: 1386 SPKALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRRANFQGYPAVCPELDLVDREDQLT 1207
SPK LHGIFERFRGILHEGEIDKRVQFLIEGLFAIR+A FQGYPAV PELDLV++EDQ+T
Sbjct: 463 SPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQIT 522
Query: 1206 HELSLEDAIDPETSLDIFKEDSQFLENEKRYEELQRSILGE-------------DEVGSD 1066
HE+SL++ IDPE SLDIFK D FLENEKRYEEL++S+LGE D+ D
Sbjct: 523 HEVSLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLGEESEDDEEGLDAESDDDDED 582
Query: 1065 QDSDDEEEANMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLSKIKLEQGQEMELCI 886
DSD+E+E M+IKDETET+LVNLRRTIYLTIMSSVDFEEAGHKL KIKLE GQEMELCI
Sbjct: 583 DDSDEEDEEEMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCI 642
Query: 885 MLLECCSQERTYLRYYGLLGQRFCMLNEIHRENFETCFVKQYSSIHRLETNKMRNVAYFF 706
MLLECCSQERTYLRYYGLLGQRFCM+N++H+ENFE CFV+QYS IHRLETNK+RNVA FF
Sbjct: 643 MLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLRNVAKFF 702
Query: 705 AHLLSTDALPWHVLSYIRLTEEDTTSSSRIFIKYLFQELNNVLGIRLLNKRLSDPLLQAS 526
AHLL TDALPWHVLSYIRLTEEDTTSSSRIFIK LFQEL+ LGIRLLN+RL+D +Q S
Sbjct: 703 AHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLNDLTMQES 762
Query: 525 FESIFPKDNPKNTRFAINYLTSIGLGGITENLREYLKNMPGLIMQQKR 382
FESIFPKDNPKNTRF IN+ TSIGLGG+TENLREYLKNMP LIMQQ++
Sbjct: 763 FESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQK 810
>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
Length = 797
Score = 760 bits (1962), Expect = 0.0
Identities = 386/529 (72%), Positives = 439/529 (82%), Gaps = 16/529 (3%)
Frame = -3
Query: 1920 GVYIPPFKLRKDNVLLDDDKSSVAYQRLTWDALRKSINGLVNKVNAANIKNIVPELFQEN 1741
GVYIPPFKL + + D KSS+ YQRLTWDALRKSINGLVNKVNA NIKNI+PELF EN
Sbjct: 223 GVYIPPFKLARMMKEVQD-KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAEN 281
Query: 1740 LIRGRGLFCRYIIKSQLASPQLTHVFAALVSVVNTKFPXXXXXXXXXXXXXXXRAYARND 1561
LIRGRGLFCR +KSQ+ASP T VFAALV+VVNTKFP RAY RND
Sbjct: 282 LIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRND 341
Query: 1560 KPQLLAATHFIAHLVNQEVAHXXXXXXXXXXXXLNPTYDSVEVAVGFITNCGSLLQDISP 1381
KPQLLAA FIAHLVNQ+VAH NPT DSVEVAVGF+T CGS+L+D+SP
Sbjct: 342 KPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSP 401
Query: 1380 KALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRRANFQGYPAVCPELDLVDREDQLTHE 1201
K LHGIFERFRGILHEGEIDKRVQFLIEGLFAIR+A F+GYPAV PELDLV++EDQLTHE
Sbjct: 402 KGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHE 461
Query: 1200 LSLEDAIDPETSLDIFKEDSQFLENEKRYEELQRSILGED--------EVGSDQ------ 1063
+SL++ IDPE +LDIFK D FLENEKRYE+L+++ILGE+ + GSD+
Sbjct: 462 ISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDESEDEDE 521
Query: 1062 --DSDDEEEANMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLSKIKLEQGQEMELC 889
+S++E+E M+I DETET+LVNLRRTIYLTIMSSVDFEEAGHKL KIKLE GQE+ELC
Sbjct: 522 EDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELC 581
Query: 888 IMLLECCSQERTYLRYYGLLGQRFCMLNEIHRENFETCFVKQYSSIHRLETNKMRNVAYF 709
+MLLECCSQERTYLRYYGLLGQRFC +N++++ENF+ CFV+QYS IHRLETNK+RNVA F
Sbjct: 582 VMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKF 641
Query: 708 FAHLLSTDALPWHVLSYIRLTEEDTTSSSRIFIKYLFQELNNVLGIRLLNKRLSDPLLQA 529
FAHLL TDALPWHVLSYIRLTEEDTTSSSRIFIK LFQEL+ LGIRLLN+RL+DP +Q
Sbjct: 642 FAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQD 701
Query: 528 SFESIFPKDNPKNTRFAINYLTSIGLGGITENLREYLKNMPGLIMQQKR 382
SFESIFP+DNPKNTRF+IN+ TSIGLGG+TENLREYLKNMP LIMQQ++
Sbjct: 702 SFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQK 750
>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
homolog, partial [Cucumis sativus]
Length = 780
Score = 757 bits (1955), Expect = 0.0
Identities = 385/529 (72%), Positives = 437/529 (82%), Gaps = 16/529 (3%)
Frame = -3
Query: 1920 GVYIPPFKLRKDNVLLDDDKSSVAYQRLTWDALRKSINGLVNKVNAANIKNIVPELFQEN 1741
GVYIPPFKL + + D KSS+ YQRLTWDALRKSINGLVNKVNA NIKNI+PELF EN
Sbjct: 223 GVYIPPFKLARMMKEVQD-KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAEN 281
Query: 1740 LIRGRGLFCRYIIKSQLASPQLTHVFAALVSVVNTKFPXXXXXXXXXXXXXXXRAYARND 1561
LIRGRGLFCR +KSQ+ASP T VFAALV+VVNTKFP RAY RND
Sbjct: 282 LIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRND 341
Query: 1560 KPQLLAATHFIAHLVNQEVAHXXXXXXXXXXXXLNPTYDSVEVAVGFITNCGSLLQDISP 1381
KPQLLAA FIAHLVNQ+VAH NPT DSVEVAVGF+T CGS+L+D+SP
Sbjct: 342 KPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSP 401
Query: 1380 KALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRRANFQGYPAVCPELDLVDREDQLTHE 1201
K LHGIFERFRGILHEGEIDKRVQFLIEGLFAIR+A F+GYPAV PELDLV++EDQLTHE
Sbjct: 402 KGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHE 461
Query: 1200 LSLEDAIDPETSLDIFKEDSQFLENEKRYEELQRSILGED--------EVGSDQ------ 1063
+SL++ IDPE +LDIFK D FLENEKRYE+L++ ILGE+ + GSD+
Sbjct: 462 ISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKXILGEESEDEEDRSDAGSDESEDEDE 521
Query: 1062 --DSDDEEEANMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLSKIKLEQGQEMELC 889
+S++E+E M+I DETET+LVNLRRTIYLTIMSSVDFEEAGHKL KIKLE GQE+ELC
Sbjct: 522 EDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELC 581
Query: 888 IMLLECCSQERTYLRYYGLLGQRFCMLNEIHRENFETCFVKQYSSIHRLETNKMRNVAYF 709
+MLLECCSQERTYLRYYGLLGQRFC +N++++ENF+ CFV+QYS IHRLETNK+RNVA F
Sbjct: 582 VMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKF 641
Query: 708 FAHLLSTDALPWHVLSYIRLTEEDTTSSSRIFIKYLFQELNNVLGIRLLNKRLSDPLLQA 529
FAHLL TDALPWHVLSYIRLTEEDTTSSSRIFIK LFQEL+ LGIRLLN+RL+DP +Q
Sbjct: 642 FAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQD 701
Query: 528 SFESIFPKDNPKNTRFAINYLTSIGLGGITENLREYLKNMPGLIMQQKR 382
SFESIFP+DNPKNTRF+IN+ TSIGLGG+TENLREY KNMP LIMQQ++
Sbjct: 702 SFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYXKNMPRLIMQQQK 750