BLASTX nr result

ID: Coptis21_contig00002544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002544
         (2885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268002.1| PREDICTED: d-2-hydroxyglutarate dehydrogenas...   687   0.0  
ref|XP_002310828.1| predicted protein [Populus trichocarpa] gi|2...   677   0.0  
ref|XP_002521506.1| d-lactate dehydrognease 2, putative [Ricinus...   667   0.0  
ref|XP_003516554.1| PREDICTED: d-2-hydroxyglutarate dehydrogenas...   650   0.0  
ref|NP_568003.2| D-2-hydroxyglutarate dehydrogenase [Arabidopsis...   636   0.0  

>ref|XP_002268002.1| PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like
            [Vitis vinifera]
          Length = 552

 Score =  687 bits (1772), Expect(2) = 0.0
 Identities = 333/420 (79%), Positives = 381/420 (90%), Gaps = 2/420 (0%)
 Frame = +1

Query: 637  TFHYFKRNFG--TKIIERNPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKY 810
            +F    R +G  T  I+RNP FS+IN++DI HF+EILG+KNVIQDEDRL+ AN+DWM KY
Sbjct: 62   SFRIQNRFYGSATTKIQRNPIFSTINSDDINHFREILGEKNVIQDEDRLSAANMDWMRKY 121

Query: 811  KGSSKLLLQPKSTQEVSKILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKI 990
            KGSSKLLLQP+ST+EVS+IL YCNSR LAVVPQGGNTGLVGGSVPVFDEVI+ +GSMN I
Sbjct: 122  KGSSKLLLQPRSTEEVSQILKYCNSRCLAVVPQGGNTGLVGGSVPVFDEVIINIGSMNNI 181

Query: 991  ISLDKVSGILVCEAGCILENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRY 1170
            IS DKVSGILVCEAGCILENL SF+ N+GFIMPLDLGAKGSCQIGGN+STNAGGLR +RY
Sbjct: 182  ISFDKVSGILVCEAGCILENLISFVDNQGFIMPLDLGAKGSCQIGGNISTNAGGLRLVRY 241

Query: 1171 GSLHGSILGLEVVQANGTVLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRL 1350
            GSLHG++LGLE V ANGTVLDMLGTLRKDNTGYDLK LFIGSEGSLG++TK+SILTPP+L
Sbjct: 242  GSLHGNVLGLEAVLANGTVLDMLGTLRKDNTGYDLKHLFIGSEGSLGVVTKVSILTPPKL 301

Query: 1351 SSTNLAFLACKDYSSCQKLLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSL 1530
            SS N+AFLACKDY SCQKLL+EAKRKLGE+LSAFEF+DNQS ++VLNHLEG RNP PPS+
Sbjct: 302  SSVNVAFLACKDYLSCQKLLLEAKRKLGEILSAFEFIDNQSFNVVLNHLEGARNPLPPSM 361

Query: 1531 HNFYVLIETTGSNETHDKEKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEAL 1710
            HNFYVLIETTGS+E++DKEKLEAFLL SME GL+SDGV+AQDINQASSFW IREG+ E++
Sbjct: 362  HNFYVLIETTGSDESYDKEKLEAFLLHSMEGGLVSDGVLAQDINQASSFWHIREGIPESI 421

Query: 1711 MKAGGIYKYDLSLPVEKMYIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
            MKAG +YKYDLS+PVEKMY +VE+MRVRLG +AKV+GYGHLGD NLHLNIS PQYDD ++
Sbjct: 422  MKAGAVYKYDLSIPVEKMYDLVEEMRVRLGHSAKVMGYGHLGDSNLHLNISTPQYDDAIL 481



 Score =  126 bits (317), Expect(2) = 0.0
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +3

Query: 1977 ILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGILN 2156
            ILAQIEPFVYEWTS HRGSISAEHG+GLMKAN+IHYSK+ ETVQLMASIKKL DPNGILN
Sbjct: 480  ILAQIEPFVYEWTSKHRGSISAEHGVGLMKANKIHYSKSAETVQLMASIKKLLDPNGILN 539

Query: 2157 PYKVIPQTL 2183
            PYKV+P +L
Sbjct: 540  PYKVLPGSL 548


>ref|XP_002310828.1| predicted protein [Populus trichocarpa] gi|222853731|gb|EEE91278.1|
            predicted protein [Populus trichocarpa]
          Length = 530

 Score =  677 bits (1746), Expect(2) = 0.0
 Identities = 344/462 (74%), Positives = 395/462 (85%), Gaps = 2/462 (0%)
 Frame = +1

Query: 511  KKKKMEKLRRTSQRILTNLYSKSLTTPPRSTSAYSGINRKLNTFHYFKRNFGTKI--IER 684
            K K   +L + S + L N    S     RS SA    N   N   Y  R+FG+    +ER
Sbjct: 3    KYKVTHRLLKQSIKSLVNRQLTSNNPIYRSISALPLGNGGRNPQLY--RSFGSLATKVER 60

Query: 685  NPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKYKGSSKLLLQPKSTQEVSK 864
            NP+FSS+N++D+ +FK +LG+KNV+QDEDRL  AN+DWM KYKGSSKLLL P++T+EVSK
Sbjct: 61   NPSFSSLNSDDVSYFKGVLGEKNVVQDEDRLETANIDWMHKYKGSSKLLLLPRNTEEVSK 120

Query: 865  ILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKIISLDKVSGILVCEAGCIL 1044
            IL YCNSR LAVVPQGGNTGLVGGSVPVFDEVI+  GSMNKII+ DKVSGILVCEAGCIL
Sbjct: 121  ILEYCNSRRLAVVPQGGNTGLVGGSVPVFDEVIINAGSMNKIIAFDKVSGILVCEAGCIL 180

Query: 1045 ENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHGSILGLEVVQANGT 1224
            ENL S+L N+GFIMPLDLGAKGSCQIGGNVSTNAGGLRF+RYGSLHG++LGLE V ANG 
Sbjct: 181  ENLISYLDNQGFIMPLDLGAKGSCQIGGNVSTNAGGLRFVRYGSLHGNVLGLEAVLANGD 240

Query: 1225 VLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRLSSTNLAFLACKDYSSCQK 1404
            VLDMLGTLRKDNTGYDLK LFIGSEGSLGI+TK+SILTPP+LSS N+AFLAC+DY SCQK
Sbjct: 241  VLDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLSSVNIAFLACEDYLSCQK 300

Query: 1405 LLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSLHNFYVLIETTGSNETHDK 1584
            LL EAKRKLGE+LSAFEFLD+ +MD+VLNHLEGVRNP P ++HNFYVLIETTGS+E++DK
Sbjct: 301  LLSEAKRKLGEILSAFEFLDSHAMDLVLNHLEGVRNPLPSAVHNFYVLIETTGSDESYDK 360

Query: 1585 EKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEALMKAGGIYKYDLSLPVEKM 1764
            EKLEAFLL SMESGLISDGV+AQDINQASSFWRIREGV EALM+AG +YKYDLS+PVEKM
Sbjct: 361  EKLEAFLLHSMESGLISDGVLAQDINQASSFWRIREGVPEALMRAGPVYKYDLSIPVEKM 420

Query: 1765 YIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
            Y +VE+MR+RL   A V+GYGHLGDGNLHLNIS P+YDDT++
Sbjct: 421  YSLVEEMRLRL---ANVVGYGHLGDGNLHLNISAPRYDDTIL 459



 Score =  125 bits (313), Expect(2) = 0.0
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = +3

Query: 1977 ILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGILN 2156
            ILAQIEP+VYEWTS HRGSISAEHGLGLMKANEI YSK+ ETVQLMASIKKL DPNGILN
Sbjct: 458  ILAQIEPYVYEWTSKHRGSISAEHGLGLMKANEIFYSKSHETVQLMASIKKLLDPNGILN 517

Query: 2157 PYKVIPQTL 2183
            PYKV+P +L
Sbjct: 518  PYKVLPHSL 526


>ref|XP_002521506.1| d-lactate dehydrognease 2, putative [Ricinus communis]
            gi|223539184|gb|EEF40777.1| d-lactate dehydrognease 2,
            putative [Ricinus communis]
          Length = 566

 Score =  667 bits (1720), Expect(2) = 0.0
 Identities = 330/415 (79%), Positives = 373/415 (89%), Gaps = 3/415 (0%)
 Frame = +1

Query: 655  RNFGT---KIIERNPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKYKGSSK 825
            R FGT   K I+RNP+F+++N +DI +FK ILG+KNVI+DEDRL  AN DWM KYKGSSK
Sbjct: 82   RGFGTAATKFIQRNPSFATLNCDDIAYFKGILGEKNVIEDEDRLESANTDWMHKYKGSSK 141

Query: 826  LLLQPKSTQEVSKILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKIISLDK 1005
            LLL P +TQEVS+IL YCNSR LAVVPQGGNTGLVGGSVPVFDEVI+ L SMN I++ D+
Sbjct: 142  LLLLPTTTQEVSQILKYCNSRRLAVVPQGGNTGLVGGSVPVFDEVIINLSSMNNIVAFDE 201

Query: 1006 VSGILVCEAGCILENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHG 1185
            VSGILVCEAGCILENL +FL N+GFIMPLDLGAKGSCQIGGNVSTNAGGLR +RYGSLHG
Sbjct: 202  VSGILVCEAGCILENLITFLDNKGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHG 261

Query: 1186 SILGLEVVQANGTVLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRLSSTNL 1365
            ++LG+E V ANG VLDMLGTLRKDNTGYDLK LFIGSEGSLGIITK+SILTPP+LSS N+
Sbjct: 262  TVLGIEAVLANGNVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIITKLSILTPPKLSSVNI 321

Query: 1366 AFLACKDYSSCQKLLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSLHNFYV 1545
            AFLACKDY SCQKLL+EAKRKLGE+LSAFEFLD+++M +VLNHLEGVRNPFPP +HNFYV
Sbjct: 322  AFLACKDYLSCQKLLLEAKRKLGEILSAFEFLDSEAMGLVLNHLEGVRNPFPP-MHNFYV 380

Query: 1546 LIETTGSNETHDKEKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEALMKAGG 1725
            LIETTGS+E++DKEKLEAFLL SMESGLISDGV+AQDINQASSFWRIREG+ EALM+AG 
Sbjct: 381  LIETTGSDESYDKEKLEAFLLHSMESGLISDGVLAQDINQASSFWRIREGIPEALMRAGP 440

Query: 1726 IYKYDLSLPVEKMYIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
            +YKYDLSLPVE MY +VE+ R RL Q AKV+GYGHLGDGNLHLNIS PQYDD ++
Sbjct: 441  VYKYDLSLPVEHMYNLVEETRERLAQKAKVVGYGHLGDGNLHLNISAPQYDDLIL 495



 Score =  123 bits (309), Expect(2) = 0.0
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = +3

Query: 1977 ILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGILN 2156
            ILAQIEP+VYEWTS HRGSISAEHGLGLMKANEI YSK+ ETVQ+MASIKKL DP GILN
Sbjct: 494  ILAQIEPYVYEWTSKHRGSISAEHGLGLMKANEIFYSKSHETVQVMASIKKLLDPKGILN 553

Query: 2157 PYKVIPQTL 2183
            PYKV+PQ+L
Sbjct: 554  PYKVLPQSL 562


>ref|XP_003516554.1| PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like
            [Glycine max]
          Length = 633

 Score =  650 bits (1678), Expect(2) = 0.0
 Identities = 318/405 (78%), Positives = 362/405 (89%)
 Frame = +1

Query: 676  IERNPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKYKGSSKLLLQPKSTQE 855
            ++RNP FS +N +D+++ + ILG KNV+QDED+L  +N DWM KYKGSSKLLLQP++  +
Sbjct: 161  VQRNPRFSKLNDDDVRYLEGILGSKNVVQDEDKLVTSNTDWMHKYKGSSKLLLQPRTADQ 220

Query: 856  VSKILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKIISLDKVSGILVCEAG 1035
            VS+IL YCNSRNLAVVPQGGNTGLVGGSVPVFDEVIV+L SMNKIIS DKVSGILVCEAG
Sbjct: 221  VSQILKYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVSLSSMNKIISFDKVSGILVCEAG 280

Query: 1036 CILENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHGSILGLEVVQA 1215
            CILEN+ SFL NEGFIMPLDLGAKGSCQIGGNVSTNAGGLR +RYGSLHGS+LG+E V A
Sbjct: 281  CILENIMSFLDNEGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGSVLGVEAVLA 340

Query: 1216 NGTVLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRLSSTNLAFLACKDYSS 1395
            NGTVLDML TLRKDNTGYDLK LFIGSEGSLGI+TK+SILTPP+LSS N+AFLACKDYSS
Sbjct: 341  NGTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLSSVNVAFLACKDYSS 400

Query: 1396 CQKLLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSLHNFYVLIETTGSNET 1575
            CQKLL EAK KLGE+LSAFEFLD QSM++VLNH+EG RNP  PSLHNFYVLIETTGS+E+
Sbjct: 401  CQKLLQEAKGKLGEILSAFEFLDVQSMNLVLNHMEGARNPL-PSLHNFYVLIETTGSDES 459

Query: 1576 HDKEKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEALMKAGGIYKYDLSLPV 1755
             DK+KLEAFLLGSME+ LISDGV+AQDINQASSFW +REG+ EALM+AG +YKYDLS+P+
Sbjct: 460  SDKQKLEAFLLGSMENELISDGVLAQDINQASSFWLLREGIPEALMRAGAVYKYDLSIPL 519

Query: 1756 EKMYIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
            E MY +VE+MR RLG TA V+GYGHLGDGNLHLNIS   YDD ++
Sbjct: 520  EHMYNLVEEMRSRLGNTANVIGYGHLGDGNLHLNISTSHYDDKIL 564



 Score =  120 bits (301), Expect(2) = 0.0
 Identities = 57/71 (80%), Positives = 64/71 (90%)
 Frame = +3

Query: 1974 KILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGIL 2153
            KIL+ IEP+VYEWTS HRGSISAEHGLGLMKANEI YSK+ ETVQ+MASIK L DPN IL
Sbjct: 562  KILSHIEPYVYEWTSKHRGSISAEHGLGLMKANEIFYSKSHETVQVMASIKNLLDPNHIL 621

Query: 2154 NPYKVIPQTLL 2186
            NPYKV+PQ+L+
Sbjct: 622  NPYKVLPQSLI 632


>ref|NP_568003.2| D-2-hydroxyglutarate dehydrogenase [Arabidopsis thaliana]
            gi|42573191|ref|NP_974692.1| D-2-hydroxyglutarate
            dehydrogenase [Arabidopsis thaliana]
            gi|294956519|sp|O23240.3|D2HDH_ARATH RecName:
            Full=D-2-hydroxyglutarate dehydrogenase, mitochondrial;
            Short=AtD-2HGDH; Flags: Precursor
            gi|332661251|gb|AEE86651.1| D-2-hydroxyglutarate
            dehydrogenase [Arabidopsis thaliana]
            gi|332661252|gb|AEE86652.1| D-2-hydroxyglutarate
            dehydrogenase [Arabidopsis thaliana]
          Length = 559

 Score =  636 bits (1640), Expect(2) = 0.0
 Identities = 309/406 (76%), Positives = 360/406 (88%)
 Frame = +1

Query: 673  IIERNPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKYKGSSKLLLQPKSTQ 852
            +I+RNP FSS++++D+ +FKEILG+KNV++D++RL  AN DWM KYKGSSKL+L PK+TQ
Sbjct: 85   LIQRNPLFSSLDSKDVSYFKEILGEKNVVEDKERLETANTDWMHKYKGSSKLMLLPKNTQ 144

Query: 853  EVSKILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKIISLDKVSGILVCEA 1032
            EVS+IL YC+SR LAVVPQGGNTGLVGGSVPVFDEVIV +G MNKI+S D+VSG+LVCEA
Sbjct: 145  EVSQILEYCDSRRLAVVPQGGNTGLVGGSVPVFDEVIVNVGLMNKILSFDEVSGVLVCEA 204

Query: 1033 GCILENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHGSILGLEVVQ 1212
            GCILENL +FL  +GFIMPLDLGAKGSC IGGNVSTNAGGLR +RYGSLHG++LGLE V 
Sbjct: 205  GCILENLATFLDTKGFIMPLDLGAKGSCHIGGNVSTNAGGLRLIRYGSLHGTVLGLEAVT 264

Query: 1213 ANGTVLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRLSSTNLAFLACKDYS 1392
            ANG VLDMLGTLRKDNTGYDLK LFIGSEGSLGI+TK+SILT P+LSS NLAF+ACKDY 
Sbjct: 265  ANGNVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTQPKLSSVNLAFIACKDYL 324

Query: 1393 SCQKLLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSLHNFYVLIETTGSNE 1572
            SCQKLL+EAKR LGE+LSAFEFLDN SMD+VLNHL+GVRNP   S  NFY+LIETTGS+E
Sbjct: 325  SCQKLLVEAKRNLGEILSAFEFLDNNSMDLVLNHLDGVRNPVSSS-ENFYILIETTGSDE 383

Query: 1573 THDKEKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEALMKAGGIYKYDLSLP 1752
            T+D+EKLEAFLL S+E GL+SDGV+AQDINQASSFWRIREG+ EAL KAG +YKYDLSLP
Sbjct: 384  TNDREKLEAFLLKSLEKGLVSDGVIAQDINQASSFWRIREGITEALQKAGAVYKYDLSLP 443

Query: 1753 VEKMYIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
            VE++Y IV  +R RLG  A V+GYGHLGDGNLHLNIS  +Y+D ++
Sbjct: 444  VEEIYNIVNDLRGRLGDLANVMGYGHLGDGNLHLNISAAEYNDKLL 489



 Score =  119 bits (299), Expect(2) = 0.0
 Identities = 56/70 (80%), Positives = 62/70 (88%)
 Frame = +3

Query: 1974 KILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGIL 2153
            K+L  IEP+VYEWTS HRGSISAEHGLG+MKANEI YSK+PETV LMASIKKL DP GIL
Sbjct: 487  KLLGLIEPYVYEWTSKHRGSISAEHGLGVMKANEIFYSKSPETVALMASIKKLLDPKGIL 546

Query: 2154 NPYKVIPQTL 2183
            NPYKV+P +L
Sbjct: 547  NPYKVLPHSL 556


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