BLASTX nr result
ID: Coptis21_contig00002544
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002544
(2885 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268002.1| PREDICTED: d-2-hydroxyglutarate dehydrogenas... 687 0.0
ref|XP_002310828.1| predicted protein [Populus trichocarpa] gi|2... 677 0.0
ref|XP_002521506.1| d-lactate dehydrognease 2, putative [Ricinus... 667 0.0
ref|XP_003516554.1| PREDICTED: d-2-hydroxyglutarate dehydrogenas... 650 0.0
ref|NP_568003.2| D-2-hydroxyglutarate dehydrogenase [Arabidopsis... 636 0.0
>ref|XP_002268002.1| PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like
[Vitis vinifera]
Length = 552
Score = 687 bits (1772), Expect(2) = 0.0
Identities = 333/420 (79%), Positives = 381/420 (90%), Gaps = 2/420 (0%)
Frame = +1
Query: 637 TFHYFKRNFG--TKIIERNPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKY 810
+F R +G T I+RNP FS+IN++DI HF+EILG+KNVIQDEDRL+ AN+DWM KY
Sbjct: 62 SFRIQNRFYGSATTKIQRNPIFSTINSDDINHFREILGEKNVIQDEDRLSAANMDWMRKY 121
Query: 811 KGSSKLLLQPKSTQEVSKILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKI 990
KGSSKLLLQP+ST+EVS+IL YCNSR LAVVPQGGNTGLVGGSVPVFDEVI+ +GSMN I
Sbjct: 122 KGSSKLLLQPRSTEEVSQILKYCNSRCLAVVPQGGNTGLVGGSVPVFDEVIINIGSMNNI 181
Query: 991 ISLDKVSGILVCEAGCILENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRY 1170
IS DKVSGILVCEAGCILENL SF+ N+GFIMPLDLGAKGSCQIGGN+STNAGGLR +RY
Sbjct: 182 ISFDKVSGILVCEAGCILENLISFVDNQGFIMPLDLGAKGSCQIGGNISTNAGGLRLVRY 241
Query: 1171 GSLHGSILGLEVVQANGTVLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRL 1350
GSLHG++LGLE V ANGTVLDMLGTLRKDNTGYDLK LFIGSEGSLG++TK+SILTPP+L
Sbjct: 242 GSLHGNVLGLEAVLANGTVLDMLGTLRKDNTGYDLKHLFIGSEGSLGVVTKVSILTPPKL 301
Query: 1351 SSTNLAFLACKDYSSCQKLLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSL 1530
SS N+AFLACKDY SCQKLL+EAKRKLGE+LSAFEF+DNQS ++VLNHLEG RNP PPS+
Sbjct: 302 SSVNVAFLACKDYLSCQKLLLEAKRKLGEILSAFEFIDNQSFNVVLNHLEGARNPLPPSM 361
Query: 1531 HNFYVLIETTGSNETHDKEKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEAL 1710
HNFYVLIETTGS+E++DKEKLEAFLL SME GL+SDGV+AQDINQASSFW IREG+ E++
Sbjct: 362 HNFYVLIETTGSDESYDKEKLEAFLLHSMEGGLVSDGVLAQDINQASSFWHIREGIPESI 421
Query: 1711 MKAGGIYKYDLSLPVEKMYIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
MKAG +YKYDLS+PVEKMY +VE+MRVRLG +AKV+GYGHLGD NLHLNIS PQYDD ++
Sbjct: 422 MKAGAVYKYDLSIPVEKMYDLVEEMRVRLGHSAKVMGYGHLGDSNLHLNISTPQYDDAIL 481
Score = 126 bits (317), Expect(2) = 0.0
Identities = 60/69 (86%), Positives = 65/69 (94%)
Frame = +3
Query: 1977 ILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGILN 2156
ILAQIEPFVYEWTS HRGSISAEHG+GLMKAN+IHYSK+ ETVQLMASIKKL DPNGILN
Sbjct: 480 ILAQIEPFVYEWTSKHRGSISAEHGVGLMKANKIHYSKSAETVQLMASIKKLLDPNGILN 539
Query: 2157 PYKVIPQTL 2183
PYKV+P +L
Sbjct: 540 PYKVLPGSL 548
>ref|XP_002310828.1| predicted protein [Populus trichocarpa] gi|222853731|gb|EEE91278.1|
predicted protein [Populus trichocarpa]
Length = 530
Score = 677 bits (1746), Expect(2) = 0.0
Identities = 344/462 (74%), Positives = 395/462 (85%), Gaps = 2/462 (0%)
Frame = +1
Query: 511 KKKKMEKLRRTSQRILTNLYSKSLTTPPRSTSAYSGINRKLNTFHYFKRNFGTKI--IER 684
K K +L + S + L N S RS SA N N Y R+FG+ +ER
Sbjct: 3 KYKVTHRLLKQSIKSLVNRQLTSNNPIYRSISALPLGNGGRNPQLY--RSFGSLATKVER 60
Query: 685 NPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKYKGSSKLLLQPKSTQEVSK 864
NP+FSS+N++D+ +FK +LG+KNV+QDEDRL AN+DWM KYKGSSKLLL P++T+EVSK
Sbjct: 61 NPSFSSLNSDDVSYFKGVLGEKNVVQDEDRLETANIDWMHKYKGSSKLLLLPRNTEEVSK 120
Query: 865 ILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKIISLDKVSGILVCEAGCIL 1044
IL YCNSR LAVVPQGGNTGLVGGSVPVFDEVI+ GSMNKII+ DKVSGILVCEAGCIL
Sbjct: 121 ILEYCNSRRLAVVPQGGNTGLVGGSVPVFDEVIINAGSMNKIIAFDKVSGILVCEAGCIL 180
Query: 1045 ENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHGSILGLEVVQANGT 1224
ENL S+L N+GFIMPLDLGAKGSCQIGGNVSTNAGGLRF+RYGSLHG++LGLE V ANG
Sbjct: 181 ENLISYLDNQGFIMPLDLGAKGSCQIGGNVSTNAGGLRFVRYGSLHGNVLGLEAVLANGD 240
Query: 1225 VLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRLSSTNLAFLACKDYSSCQK 1404
VLDMLGTLRKDNTGYDLK LFIGSEGSLGI+TK+SILTPP+LSS N+AFLAC+DY SCQK
Sbjct: 241 VLDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLSSVNIAFLACEDYLSCQK 300
Query: 1405 LLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSLHNFYVLIETTGSNETHDK 1584
LL EAKRKLGE+LSAFEFLD+ +MD+VLNHLEGVRNP P ++HNFYVLIETTGS+E++DK
Sbjct: 301 LLSEAKRKLGEILSAFEFLDSHAMDLVLNHLEGVRNPLPSAVHNFYVLIETTGSDESYDK 360
Query: 1585 EKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEALMKAGGIYKYDLSLPVEKM 1764
EKLEAFLL SMESGLISDGV+AQDINQASSFWRIREGV EALM+AG +YKYDLS+PVEKM
Sbjct: 361 EKLEAFLLHSMESGLISDGVLAQDINQASSFWRIREGVPEALMRAGPVYKYDLSIPVEKM 420
Query: 1765 YIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
Y +VE+MR+RL A V+GYGHLGDGNLHLNIS P+YDDT++
Sbjct: 421 YSLVEEMRLRL---ANVVGYGHLGDGNLHLNISAPRYDDTIL 459
Score = 125 bits (313), Expect(2) = 0.0
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +3
Query: 1977 ILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGILN 2156
ILAQIEP+VYEWTS HRGSISAEHGLGLMKANEI YSK+ ETVQLMASIKKL DPNGILN
Sbjct: 458 ILAQIEPYVYEWTSKHRGSISAEHGLGLMKANEIFYSKSHETVQLMASIKKLLDPNGILN 517
Query: 2157 PYKVIPQTL 2183
PYKV+P +L
Sbjct: 518 PYKVLPHSL 526
>ref|XP_002521506.1| d-lactate dehydrognease 2, putative [Ricinus communis]
gi|223539184|gb|EEF40777.1| d-lactate dehydrognease 2,
putative [Ricinus communis]
Length = 566
Score = 667 bits (1720), Expect(2) = 0.0
Identities = 330/415 (79%), Positives = 373/415 (89%), Gaps = 3/415 (0%)
Frame = +1
Query: 655 RNFGT---KIIERNPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKYKGSSK 825
R FGT K I+RNP+F+++N +DI +FK ILG+KNVI+DEDRL AN DWM KYKGSSK
Sbjct: 82 RGFGTAATKFIQRNPSFATLNCDDIAYFKGILGEKNVIEDEDRLESANTDWMHKYKGSSK 141
Query: 826 LLLQPKSTQEVSKILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKIISLDK 1005
LLL P +TQEVS+IL YCNSR LAVVPQGGNTGLVGGSVPVFDEVI+ L SMN I++ D+
Sbjct: 142 LLLLPTTTQEVSQILKYCNSRRLAVVPQGGNTGLVGGSVPVFDEVIINLSSMNNIVAFDE 201
Query: 1006 VSGILVCEAGCILENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHG 1185
VSGILVCEAGCILENL +FL N+GFIMPLDLGAKGSCQIGGNVSTNAGGLR +RYGSLHG
Sbjct: 202 VSGILVCEAGCILENLITFLDNKGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHG 261
Query: 1186 SILGLEVVQANGTVLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRLSSTNL 1365
++LG+E V ANG VLDMLGTLRKDNTGYDLK LFIGSEGSLGIITK+SILTPP+LSS N+
Sbjct: 262 TVLGIEAVLANGNVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIITKLSILTPPKLSSVNI 321
Query: 1366 AFLACKDYSSCQKLLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSLHNFYV 1545
AFLACKDY SCQKLL+EAKRKLGE+LSAFEFLD+++M +VLNHLEGVRNPFPP +HNFYV
Sbjct: 322 AFLACKDYLSCQKLLLEAKRKLGEILSAFEFLDSEAMGLVLNHLEGVRNPFPP-MHNFYV 380
Query: 1546 LIETTGSNETHDKEKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEALMKAGG 1725
LIETTGS+E++DKEKLEAFLL SMESGLISDGV+AQDINQASSFWRIREG+ EALM+AG
Sbjct: 381 LIETTGSDESYDKEKLEAFLLHSMESGLISDGVLAQDINQASSFWRIREGIPEALMRAGP 440
Query: 1726 IYKYDLSLPVEKMYIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
+YKYDLSLPVE MY +VE+ R RL Q AKV+GYGHLGDGNLHLNIS PQYDD ++
Sbjct: 441 VYKYDLSLPVEHMYNLVEETRERLAQKAKVVGYGHLGDGNLHLNISAPQYDDLIL 495
Score = 123 bits (309), Expect(2) = 0.0
Identities = 59/69 (85%), Positives = 64/69 (92%)
Frame = +3
Query: 1977 ILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGILN 2156
ILAQIEP+VYEWTS HRGSISAEHGLGLMKANEI YSK+ ETVQ+MASIKKL DP GILN
Sbjct: 494 ILAQIEPYVYEWTSKHRGSISAEHGLGLMKANEIFYSKSHETVQVMASIKKLLDPKGILN 553
Query: 2157 PYKVIPQTL 2183
PYKV+PQ+L
Sbjct: 554 PYKVLPQSL 562
>ref|XP_003516554.1| PREDICTED: d-2-hydroxyglutarate dehydrogenase, mitochondrial-like
[Glycine max]
Length = 633
Score = 650 bits (1678), Expect(2) = 0.0
Identities = 318/405 (78%), Positives = 362/405 (89%)
Frame = +1
Query: 676 IERNPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKYKGSSKLLLQPKSTQE 855
++RNP FS +N +D+++ + ILG KNV+QDED+L +N DWM KYKGSSKLLLQP++ +
Sbjct: 161 VQRNPRFSKLNDDDVRYLEGILGSKNVVQDEDKLVTSNTDWMHKYKGSSKLLLQPRTADQ 220
Query: 856 VSKILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKIISLDKVSGILVCEAG 1035
VS+IL YCNSRNLAVVPQGGNTGLVGGSVPVFDEVIV+L SMNKIIS DKVSGILVCEAG
Sbjct: 221 VSQILKYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVSLSSMNKIISFDKVSGILVCEAG 280
Query: 1036 CILENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHGSILGLEVVQA 1215
CILEN+ SFL NEGFIMPLDLGAKGSCQIGGNVSTNAGGLR +RYGSLHGS+LG+E V A
Sbjct: 281 CILENIMSFLDNEGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGSVLGVEAVLA 340
Query: 1216 NGTVLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRLSSTNLAFLACKDYSS 1395
NGTVLDML TLRKDNTGYDLK LFIGSEGSLGI+TK+SILTPP+LSS N+AFLACKDYSS
Sbjct: 341 NGTVLDMLKTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTPPKLSSVNVAFLACKDYSS 400
Query: 1396 CQKLLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSLHNFYVLIETTGSNET 1575
CQKLL EAK KLGE+LSAFEFLD QSM++VLNH+EG RNP PSLHNFYVLIETTGS+E+
Sbjct: 401 CQKLLQEAKGKLGEILSAFEFLDVQSMNLVLNHMEGARNPL-PSLHNFYVLIETTGSDES 459
Query: 1576 HDKEKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEALMKAGGIYKYDLSLPV 1755
DK+KLEAFLLGSME+ LISDGV+AQDINQASSFW +REG+ EALM+AG +YKYDLS+P+
Sbjct: 460 SDKQKLEAFLLGSMENELISDGVLAQDINQASSFWLLREGIPEALMRAGAVYKYDLSIPL 519
Query: 1756 EKMYIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
E MY +VE+MR RLG TA V+GYGHLGDGNLHLNIS YDD ++
Sbjct: 520 EHMYNLVEEMRSRLGNTANVIGYGHLGDGNLHLNISTSHYDDKIL 564
Score = 120 bits (301), Expect(2) = 0.0
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +3
Query: 1974 KILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGIL 2153
KIL+ IEP+VYEWTS HRGSISAEHGLGLMKANEI YSK+ ETVQ+MASIK L DPN IL
Sbjct: 562 KILSHIEPYVYEWTSKHRGSISAEHGLGLMKANEIFYSKSHETVQVMASIKNLLDPNHIL 621
Query: 2154 NPYKVIPQTLL 2186
NPYKV+PQ+L+
Sbjct: 622 NPYKVLPQSLI 632
>ref|NP_568003.2| D-2-hydroxyglutarate dehydrogenase [Arabidopsis thaliana]
gi|42573191|ref|NP_974692.1| D-2-hydroxyglutarate
dehydrogenase [Arabidopsis thaliana]
gi|294956519|sp|O23240.3|D2HDH_ARATH RecName:
Full=D-2-hydroxyglutarate dehydrogenase, mitochondrial;
Short=AtD-2HGDH; Flags: Precursor
gi|332661251|gb|AEE86651.1| D-2-hydroxyglutarate
dehydrogenase [Arabidopsis thaliana]
gi|332661252|gb|AEE86652.1| D-2-hydroxyglutarate
dehydrogenase [Arabidopsis thaliana]
Length = 559
Score = 636 bits (1640), Expect(2) = 0.0
Identities = 309/406 (76%), Positives = 360/406 (88%)
Frame = +1
Query: 673 IIERNPAFSSINTEDIKHFKEILGDKNVIQDEDRLAIANVDWMGKYKGSSKLLLQPKSTQ 852
+I+RNP FSS++++D+ +FKEILG+KNV++D++RL AN DWM KYKGSSKL+L PK+TQ
Sbjct: 85 LIQRNPLFSSLDSKDVSYFKEILGEKNVVEDKERLETANTDWMHKYKGSSKLMLLPKNTQ 144
Query: 853 EVSKILGYCNSRNLAVVPQGGNTGLVGGSVPVFDEVIVTLGSMNKIISLDKVSGILVCEA 1032
EVS+IL YC+SR LAVVPQGGNTGLVGGSVPVFDEVIV +G MNKI+S D+VSG+LVCEA
Sbjct: 145 EVSQILEYCDSRRLAVVPQGGNTGLVGGSVPVFDEVIVNVGLMNKILSFDEVSGVLVCEA 204
Query: 1033 GCILENLDSFLINEGFIMPLDLGAKGSCQIGGNVSTNAGGLRFLRYGSLHGSILGLEVVQ 1212
GCILENL +FL +GFIMPLDLGAKGSC IGGNVSTNAGGLR +RYGSLHG++LGLE V
Sbjct: 205 GCILENLATFLDTKGFIMPLDLGAKGSCHIGGNVSTNAGGLRLIRYGSLHGTVLGLEAVT 264
Query: 1213 ANGTVLDMLGTLRKDNTGYDLKQLFIGSEGSLGIITKISILTPPRLSSTNLAFLACKDYS 1392
ANG VLDMLGTLRKDNTGYDLK LFIGSEGSLGI+TK+SILT P+LSS NLAF+ACKDY
Sbjct: 265 ANGNVLDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSILTQPKLSSVNLAFIACKDYL 324
Query: 1393 SCQKLLMEAKRKLGEVLSAFEFLDNQSMDMVLNHLEGVRNPFPPSLHNFYVLIETTGSNE 1572
SCQKLL+EAKR LGE+LSAFEFLDN SMD+VLNHL+GVRNP S NFY+LIETTGS+E
Sbjct: 325 SCQKLLVEAKRNLGEILSAFEFLDNNSMDLVLNHLDGVRNPVSSS-ENFYILIETTGSDE 383
Query: 1573 THDKEKLEAFLLGSMESGLISDGVVAQDINQASSFWRIREGVAEALMKAGGIYKYDLSLP 1752
T+D+EKLEAFLL S+E GL+SDGV+AQDINQASSFWRIREG+ EAL KAG +YKYDLSLP
Sbjct: 384 TNDREKLEAFLLKSLEKGLVSDGVIAQDINQASSFWRIREGITEALQKAGAVYKYDLSLP 443
Query: 1753 VEKMYIIVEKMRVRLGQTAKVLGYGHLGDGNLHLNISVPQYDDTVI 1890
VE++Y IV +R RLG A V+GYGHLGDGNLHLNIS +Y+D ++
Sbjct: 444 VEEIYNIVNDLRGRLGDLANVMGYGHLGDGNLHLNISAAEYNDKLL 489
Score = 119 bits (299), Expect(2) = 0.0
Identities = 56/70 (80%), Positives = 62/70 (88%)
Frame = +3
Query: 1974 KILAQIEPFVYEWTSNHRGSISAEHGLGLMKANEIHYSKTPETVQLMASIKKLFDPNGIL 2153
K+L IEP+VYEWTS HRGSISAEHGLG+MKANEI YSK+PETV LMASIKKL DP GIL
Sbjct: 487 KLLGLIEPYVYEWTSKHRGSISAEHGLGVMKANEIFYSKSPETVALMASIKKLLDPKGIL 546
Query: 2154 NPYKVIPQTL 2183
NPYKV+P +L
Sbjct: 547 NPYKVLPHSL 556