BLASTX nr result
ID: Coptis21_contig00002537
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002537
(2024 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-l... 610 0.0
emb|CBI26906.3| unnamed protein product [Vitis vinifera] 610 0.0
ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|2... 590 0.0
ref|XP_002526020.1| conserved hypothetical protein [Ricinus comm... 584 0.0
ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221... 562 0.0
>ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
Length = 1036
Score = 610 bits (1573), Expect(2) = 0.0
Identities = 312/400 (78%), Positives = 346/400 (86%), Gaps = 1/400 (0%)
Frame = +2
Query: 560 AFMVPTELLAVQHYEHLLNLLNNIEDP-CKPSIALLTGSTPARQSRIVRKGLQDGDISLV 736
AFMVPTELLA+QHYE L+NLL N+E CKPSIALLTGSTP++QSR+ KGLQ+GDISLV
Sbjct: 637 AFMVPTELLALQHYEQLINLLENMEGAECKPSIALLTGSTPSKQSRMTHKGLQNGDISLV 696
Query: 737 IGTHSLIAEKIEFSALRIAVIDEQHRFGVIQRGKFNSKLYSSITSLRKNPEGTEGSLKDD 916
IGTHSLI+EK+EFSALRIAV+DEQHRFGVIQRG+FNSKLY + S R ++ + D
Sbjct: 697 IGTHSLISEKVEFSALRIAVVDEQHRFGVIQRGRFNSKLYYNSISSRMAEASSDVLSEGD 756
Query: 917 VFMATHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVETYIFEGTHAGNESVYQM 1096
MA H+LAMSATPIPRTLALALYGDMSLTQITDLPPGR PVETY EG AG E VYQM
Sbjct: 757 TRMAPHILAMSATPIPRTLALALYGDMSLTQITDLPPGRTPVETYTIEGCDAGFEDVYQM 816
Query: 1097 MREELISGGKVYIVYPIIEASEQLPQLRAASSDLETISETFDGYQCGLLHGRMKSDEKDE 1276
M +EL GGK+YIVYP+IE SEQLPQLRAAS+DLETIS F GY+CGLLHGRMKSDEKDE
Sbjct: 817 MLDELEVGGKIYIVYPVIEQSEQLPQLRAASTDLETISSRFQGYKCGLLHGRMKSDEKDE 876
Query: 1277 ALRRFRSGETNILLSTQVVEIGVDIPDASMMVVMNAERFGIAQLHQLRGRVGRGVKKSKC 1456
ALRRFRSGETNILLSTQV+EIGVD+PDASMMVVMNAERFGIAQLHQLRGRVGRGV+KSKC
Sbjct: 877 ALRRFRSGETNILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGVRKSKC 936
Query: 1457 VFLVSSASGLNRLKVLEKSSDGFYLAKVXXXXXXXXXXXXKKQSGHIPEFPIARLEIDGN 1636
+ + S+ASGLNRLKVLE SSDGFYLA + KKQSGH+PEFPIARLEIDGN
Sbjct: 937 LLVSSTASGLNRLKVLENSSDGFYLANMDLLLRGPGDLLGKKQSGHLPEFPIARLEIDGN 996
Query: 1637 MLEEAHRAALKILGTSHDLQRFPKLKAELSMRQPLCLLGD 1756
+L+EAH AALKILGTSHDL++FP+LKAELSMRQPLCLLGD
Sbjct: 997 ILQEAHLAALKILGTSHDLEQFPELKAELSMRQPLCLLGD 1036
Score = 247 bits (631), Expect(2) = 0.0
Identities = 120/165 (72%), Positives = 139/165 (84%)
Frame = +3
Query: 6 RAMISRALEVLSIDIDPVPQDIREEFDLLSLHNAYMVIHHPKNLGEADLARKRLLFDEFF 185
R +ISRAL L ++IDP+P+DI E+F LLSLH+AY+ IH PK+L EADLARKRL+FDEFF
Sbjct: 471 RDIISRALHSLPVNIDPIPKDIIEDFGLLSLHSAYVGIHQPKDLKEADLARKRLIFDEFF 530
Query: 186 YLQLGRLFQMLESLGNRVEREGLLDSYRNSNLNGALIEDWCALTHKLLKVLPYSLTSSQL 365
YLQLGRLFQ+LE LG ++E++GLLD YR LN +E+W +LT LK LPYSLTSSQL
Sbjct: 531 YLQLGRLFQILEGLGTKIEKDGLLDKYRKPELNTVFVEEWSSLTKNFLKALPYSLTSSQL 590
Query: 366 KAVSEIIWDLKQPVPMYRLLQGDVGCGKTVVAFLACMEVIGSGYQ 500
A SEIIWDLK+PVPM RLLQGDVGCGKTVVAFLACMEVIGSGYQ
Sbjct: 591 SAASEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 635
>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
Length = 988
Score = 610 bits (1573), Expect(2) = 0.0
Identities = 312/400 (78%), Positives = 346/400 (86%), Gaps = 1/400 (0%)
Frame = +2
Query: 560 AFMVPTELLAVQHYEHLLNLLNNIEDP-CKPSIALLTGSTPARQSRIVRKGLQDGDISLV 736
AFMVPTELLA+QHYE L+NLL N+E CKPSIALLTGSTP++QSR+ KGLQ+GDISLV
Sbjct: 589 AFMVPTELLALQHYEQLINLLENMEGAECKPSIALLTGSTPSKQSRMTHKGLQNGDISLV 648
Query: 737 IGTHSLIAEKIEFSALRIAVIDEQHRFGVIQRGKFNSKLYSSITSLRKNPEGTEGSLKDD 916
IGTHSLI+EK+EFSALRIAV+DEQHRFGVIQRG+FNSKLY + S R ++ + D
Sbjct: 649 IGTHSLISEKVEFSALRIAVVDEQHRFGVIQRGRFNSKLYYNSISSRMAEASSDVLSEGD 708
Query: 917 VFMATHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVETYIFEGTHAGNESVYQM 1096
MA H+LAMSATPIPRTLALALYGDMSLTQITDLPPGR PVETY EG AG E VYQM
Sbjct: 709 TRMAPHILAMSATPIPRTLALALYGDMSLTQITDLPPGRTPVETYTIEGCDAGFEDVYQM 768
Query: 1097 MREELISGGKVYIVYPIIEASEQLPQLRAASSDLETISETFDGYQCGLLHGRMKSDEKDE 1276
M +EL GGK+YIVYP+IE SEQLPQLRAAS+DLETIS F GY+CGLLHGRMKSDEKDE
Sbjct: 769 MLDELEVGGKIYIVYPVIEQSEQLPQLRAASTDLETISSRFQGYKCGLLHGRMKSDEKDE 828
Query: 1277 ALRRFRSGETNILLSTQVVEIGVDIPDASMMVVMNAERFGIAQLHQLRGRVGRGVKKSKC 1456
ALRRFRSGETNILLSTQV+EIGVD+PDASMMVVMNAERFGIAQLHQLRGRVGRGV+KSKC
Sbjct: 829 ALRRFRSGETNILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGVRKSKC 888
Query: 1457 VFLVSSASGLNRLKVLEKSSDGFYLAKVXXXXXXXXXXXXKKQSGHIPEFPIARLEIDGN 1636
+ + S+ASGLNRLKVLE SSDGFYLA + KKQSGH+PEFPIARLEIDGN
Sbjct: 889 LLVSSTASGLNRLKVLENSSDGFYLANMDLLLRGPGDLLGKKQSGHLPEFPIARLEIDGN 948
Query: 1637 MLEEAHRAALKILGTSHDLQRFPKLKAELSMRQPLCLLGD 1756
+L+EAH AALKILGTSHDL++FP+LKAELSMRQPLCLLGD
Sbjct: 949 ILQEAHLAALKILGTSHDLEQFPELKAELSMRQPLCLLGD 988
Score = 247 bits (631), Expect(2) = 0.0
Identities = 120/165 (72%), Positives = 139/165 (84%)
Frame = +3
Query: 6 RAMISRALEVLSIDIDPVPQDIREEFDLLSLHNAYMVIHHPKNLGEADLARKRLLFDEFF 185
R +ISRAL L ++IDP+P+DI E+F LLSLH+AY+ IH PK+L EADLARKRL+FDEFF
Sbjct: 423 RDIISRALHSLPVNIDPIPKDIIEDFGLLSLHSAYVGIHQPKDLKEADLARKRLIFDEFF 482
Query: 186 YLQLGRLFQMLESLGNRVEREGLLDSYRNSNLNGALIEDWCALTHKLLKVLPYSLTSSQL 365
YLQLGRLFQ+LE LG ++E++GLLD YR LN +E+W +LT LK LPYSLTSSQL
Sbjct: 483 YLQLGRLFQILEGLGTKIEKDGLLDKYRKPELNTVFVEEWSSLTKNFLKALPYSLTSSQL 542
Query: 366 KAVSEIIWDLKQPVPMYRLLQGDVGCGKTVVAFLACMEVIGSGYQ 500
A SEIIWDLK+PVPM RLLQGDVGCGKTVVAFLACMEVIGSGYQ
Sbjct: 543 SAASEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 587
>ref|XP_002314808.1| predicted protein [Populus trichocarpa] gi|222863848|gb|EEF00979.1|
predicted protein [Populus trichocarpa]
Length = 888
Score = 590 bits (1522), Expect(2) = 0.0
Identities = 298/400 (74%), Positives = 341/400 (85%), Gaps = 1/400 (0%)
Frame = +2
Query: 560 AFMVPTELLAVQHYEHLLNLLNNI-EDPCKPSIALLTGSTPARQSRIVRKGLQDGDISLV 736
AFMVPTELLA+QHYE LLNLL + E KPS+ALLTGSTP++QSR++R+ LQ GDIS+V
Sbjct: 489 AFMVPTELLAIQHYEQLLNLLETMGEVQSKPSVALLTGSTPSKQSRMIRRDLQSGDISMV 548
Query: 737 IGTHSLIAEKIEFSALRIAVIDEQHRFGVIQRGKFNSKLYSSITSLRKNPEGTEGSLKDD 916
IGTHSLI+E +EFSALRIAV+DEQ RFGVIQRG+FNSKLY S S R + T+ S + D
Sbjct: 549 IGTHSLISENVEFSALRIAVVDEQQRFGVIQRGRFNSKLYHSPLSSRMSASNTDTSSEGD 608
Query: 917 VFMATHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVETYIFEGTHAGNESVYQM 1096
MA HVLAMSATPIPRTLALALYGDMSLTQITDLPPGR+PVETYIFEG + G E VY+M
Sbjct: 609 FHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRVPVETYIFEGNYDGFEDVYKM 668
Query: 1097 MREELISGGKVYIVYPIIEASEQLPQLRAASSDLETISETFDGYQCGLLHGRMKSDEKDE 1276
MR+EL +GG+VY+VYP+IE SEQLPQLRAA++DLE IS F Y CGLLHG+MKSD+KDE
Sbjct: 669 MRDELEAGGRVYLVYPVIEQSEQLPQLRAAAADLEVISHRFQDYNCGLLHGKMKSDDKDE 728
Query: 1277 ALRRFRSGETNILLSTQVVEIGVDIPDASMMVVMNAERFGIAQLHQLRGRVGRGVKKSKC 1456
AL+RFRSG T+ILLSTQV+EIGVD+PDASMMVVMNAERFGIAQLHQLRGRVGRG +KSKC
Sbjct: 729 ALKRFRSGVTHILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGARKSKC 788
Query: 1457 VFLVSSASGLNRLKVLEKSSDGFYLAKVXXXXXXXXXXXXKKQSGHIPEFPIARLEIDGN 1636
+ + S+ S L+RLKVLEKSSDGFYLA + KKQSGH+PEFPIARLEIDGN
Sbjct: 789 LLVASTTSSLDRLKVLEKSSDGFYLANMDLLLRGPGDLLGKKQSGHLPEFPIARLEIDGN 848
Query: 1637 MLEEAHRAALKILGTSHDLQRFPKLKAELSMRQPLCLLGD 1756
+L+EAH AALK+LG SHDL+RFP LKAELSMRQPLCLLGD
Sbjct: 849 ILQEAHAAALKVLGESHDLERFPALKAELSMRQPLCLLGD 888
Score = 240 bits (612), Expect(2) = 0.0
Identities = 116/165 (70%), Positives = 134/165 (81%)
Frame = +3
Query: 6 RAMISRALEVLSIDIDPVPQDIREEFDLLSLHNAYMVIHHPKNLGEADLARKRLLFDEFF 185
R ISRA+ L D+DP+P++I ++F LL LH AY+ IH PKN EADLARKRL+FDEFF
Sbjct: 323 RDTISRAVRALLADVDPIPKEIIQDFGLLRLHEAYIGIHQPKNADEADLARKRLIFDEFF 382
Query: 186 YLQLGRLFQMLESLGNRVEREGLLDSYRNSNLNGALIEDWCALTHKLLKVLPYSLTSSQL 365
YLQLGRLFQMLE LG+R+E++GLLD Y LN +E+W LT K LK LPYSLTSSQL
Sbjct: 383 YLQLGRLFQMLEGLGSRMEKDGLLDKYSKPELNAVYVEEWSNLTKKFLKALPYSLTSSQL 442
Query: 366 KAVSEIIWDLKQPVPMYRLLQGDVGCGKTVVAFLACMEVIGSGYQ 500
A S+IIWDLK+PVPM RLLQGDVGCGKT+VAFLACMEVIGSGYQ
Sbjct: 443 SASSQIIWDLKRPVPMNRLLQGDVGCGKTIVAFLACMEVIGSGYQ 487
>ref|XP_002526020.1| conserved hypothetical protein [Ricinus communis]
gi|223534667|gb|EEF36360.1| conserved hypothetical
protein [Ricinus communis]
Length = 983
Score = 584 bits (1505), Expect(2) = 0.0
Identities = 300/402 (74%), Positives = 341/402 (84%), Gaps = 3/402 (0%)
Frame = +2
Query: 560 AFMVPTELLAVQHYEHLLNLLNNIED-PCKPSIALLTGSTPARQSRIVRKGLQDGDISLV 736
AFMVPTELLA+QHYEHLL LL +E+ KPSIALLTGSTP +QSR++RK LQ GDIS+V
Sbjct: 584 AFMVPTELLAIQHYEHLLKLLETMEENQSKPSIALLTGSTPLKQSRMIRKDLQSGDISMV 643
Query: 737 IGTHSLIAEKIEFSALRIAVIDEQHRFGVIQRGKFNSKLYSSITSLRKNPEGTE--GSLK 910
IGTHSLI+E +EFSALRIAV+DEQHRFGVIQRG+FNSKLY TSLR T GS K
Sbjct: 644 IGTHSLISENVEFSALRIAVVDEQHRFGVIQRGQFNSKLY--YTSLRSRMAVTTSIGSSK 701
Query: 911 DDVFMATHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVETYIFEGTHAGNESVY 1090
DV+MA H+LAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVET+I EG G E +Y
Sbjct: 702 GDVYMAPHILAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVETHIIEGNSQGFEDIY 761
Query: 1091 QMMREELISGGKVYIVYPIIEASEQLPQLRAASSDLETISETFDGYQCGLLHGRMKSDEK 1270
+M+ +EL +GG+VY+VYP+IE SEQLPQLRAAS+DL+ IS+ F + CGLLHGRMKSDEK
Sbjct: 762 KMILDELEAGGRVYLVYPVIEQSEQLPQLRAASADLQAISDRFQRFNCGLLHGRMKSDEK 821
Query: 1271 DEALRRFRSGETNILLSTQVVEIGVDIPDASMMVVMNAERFGIAQLHQLRGRVGRGVKKS 1450
DEALRRFRSGET ILLSTQV+E+GVD+PDASMMVVMNAERFGIAQLHQLRGRVGRG +KS
Sbjct: 822 DEALRRFRSGETQILLSTQVIEVGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGERKS 881
Query: 1451 KCVFLVSSASGLNRLKVLEKSSDGFYLAKVXXXXXXXXXXXXKKQSGHIPEFPIARLEID 1630
KC+ L S++S LNRLKVLEKSSDGF+LA KKQSGH+P+FPIARLEI
Sbjct: 882 KCILLGSTSSSLNRLKVLEKSSDGFHLANADLLLRGPGDLLGKKQSGHLPDFPIARLEIV 941
Query: 1631 GNMLEEAHRAALKILGTSHDLQRFPKLKAELSMRQPLCLLGD 1756
G +L+EAH AALK+LG SHDL+RFP+LKAELSMRQPLCLLGD
Sbjct: 942 GKILQEAHDAALKVLGDSHDLERFPELKAELSMRQPLCLLGD 983
Score = 234 bits (596), Expect(2) = 0.0
Identities = 115/165 (69%), Positives = 134/165 (81%)
Frame = +3
Query: 6 RAMISRALEVLSIDIDPVPQDIREEFDLLSLHNAYMVIHHPKNLGEADLARKRLLFDEFF 185
R +I+RAL+ L IDP+P++I ++F LL LH+AY IH P+N+ EAD AR+RL+FDEFF
Sbjct: 418 RDIIARALQALGPGIDPIPKEIIQDFRLLHLHDAYTGIHQPRNVEEADSARRRLIFDEFF 477
Query: 186 YLQLGRLFQMLESLGNRVEREGLLDSYRNSNLNGALIEDWCALTHKLLKVLPYSLTSSQL 365
YLQLGRLFQMLE L R E++GLL YR LN +E+W +LT K LK LPYSLTSSQL
Sbjct: 478 YLQLGRLFQMLEGLSTRTEKDGLLLKYRKPELNALYVENWSSLTKKFLKALPYSLTSSQL 537
Query: 366 KAVSEIIWDLKQPVPMYRLLQGDVGCGKTVVAFLACMEVIGSGYQ 500
AVSEIIWDLK+PVPM RLLQGDVGCGKTVVAFLACMEVIGSGYQ
Sbjct: 538 NAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQ 582
>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
Length = 1544
Score = 562 bits (1448), Expect(2) = 0.0
Identities = 282/400 (70%), Positives = 333/400 (83%), Gaps = 1/400 (0%)
Frame = +2
Query: 560 AFMVPTELLAVQHYEHLLNLLNNIED-PCKPSIALLTGSTPARQSRIVRKGLQDGDISLV 736
AFMVPTELLA+QHYEHLL LL N+E KPS+ALLTGST ++QSR++R+GLQ G+ SLV
Sbjct: 1145 AFMVPTELLAIQHYEHLLGLLENMEGVENKPSVALLTGSTSSKQSRMIREGLQSGETSLV 1204
Query: 737 IGTHSLIAEKIEFSALRIAVIDEQHRFGVIQRGKFNSKLYSSITSLRKNPEGTEGSLKDD 916
IGT SLI+EK+EFSALRIAV+DEQHRFGV+QRGKF SKL+++ S + E +G+ +
Sbjct: 1205 IGTQSLISEKVEFSALRIAVVDEQHRFGVVQRGKFGSKLFNNSISSKIAAEHADGTSSGN 1264
Query: 917 VFMATHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVETYIFEGTHAGNESVYQM 1096
MA HVLAMSATPIPRTLALALYG+MSLT ITDLPPGR+PV+TY G G E VY+M
Sbjct: 1265 FSMAPHVLAMSATPIPRTLALALYGEMSLTHITDLPPGRVPVKTYSIVGNDEGFEKVYEM 1324
Query: 1097 MREELISGGKVYIVYPIIEASEQLPQLRAASSDLETISETFDGYQCGLLHGRMKSDEKDE 1276
M +EL GGKVY+VYP+IE S+QLPQLRAAS DL++IS F GY CGLLHG+MK DEK+E
Sbjct: 1325 MLDELDKGGKVYLVYPVIEQSDQLPQLRAASEDLQSISYRFQGYNCGLLHGKMKKDEKEE 1384
Query: 1277 ALRRFRSGETNILLSTQVVEIGVDIPDASMMVVMNAERFGIAQLHQLRGRVGRGVKKSKC 1456
ALRRFR+G+T ILLSTQV+E+GVD+PDASMMVVMNAERFGIAQLHQLRGRVGRG+KKS+C
Sbjct: 1385 ALRRFRNGDTQILLSTQVIEVGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGMKKSRC 1444
Query: 1457 VFLVSSASGLNRLKVLEKSSDGFYLAKVXXXXXXXXXXXXKKQSGHIPEFPIARLEIDGN 1636
+ + S+ S L+RLKVLE SSDGF+LA+V KKQSGH+PEFPIARLE+DGN
Sbjct: 1445 ILVASTTSSLSRLKVLENSSDGFHLAEVDLLLRGPGDLLGKKQSGHLPEFPIARLEVDGN 1504
Query: 1637 MLEEAHRAALKILGTSHDLQRFPKLKAELSMRQPLCLLGD 1756
+LE+AH AALKIL SHDL++FP LK ELSMRQPLCLLGD
Sbjct: 1505 ILEDAHLAALKILSISHDLEQFPALKMELSMRQPLCLLGD 1544
Score = 232 bits (591), Expect(2) = 0.0
Identities = 109/165 (66%), Positives = 135/165 (81%)
Frame = +3
Query: 6 RAMISRALEVLSIDIDPVPQDIREEFDLLSLHNAYMVIHHPKNLGEADLARKRLLFDEFF 185
R +I+R ++ L I++DP+P+DI + F LL L +AY IH P ++ EADLARKRL+FDEFF
Sbjct: 979 RDIIARGIDALPINVDPIPEDITQGFGLLRLRDAYNGIHRPNSIKEADLARKRLMFDEFF 1038
Query: 186 YLQLGRLFQMLESLGNRVEREGLLDSYRNSNLNGALIEDWCALTHKLLKVLPYSLTSSQL 365
YLQL RLFQMLE LG R+E++ LLD YR +LN A ++DW LT K LK LPYSLT SQ+
Sbjct: 1039 YLQLARLFQMLEGLGTRIEKDCLLDKYRQPHLNAAYMKDWAYLTQKFLKALPYSLTVSQM 1098
Query: 366 KAVSEIIWDLKQPVPMYRLLQGDVGCGKTVVAFLACMEVIGSGYQ 500
KA++EIIWDLK+P+PM RLLQGDVGCGKT+VAFLACMEVIG+GYQ
Sbjct: 1099 KAIAEIIWDLKRPIPMNRLLQGDVGCGKTIVAFLACMEVIGTGYQ 1143