BLASTX nr result

ID: Coptis21_contig00002511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002511
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor ...    71   8e-11
ref|XP_002530486.1| ARF GTPase activator, putative [Ricinus comm...    70   2e-10
ref|XP_004137344.1| PREDICTED: probable ADP-ribosylation factor ...    68   7e-10
emb|CAN69475.1| hypothetical protein VITISV_014376 [Vitis vinife...    67   1e-09
ref|NP_001132168.1| uncharacterized protein LOC100193590 [Zea ma...    66   3e-09

>ref|XP_002282569.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Vitis vinifera]
          Length = 181

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/56 (67%), Positives = 43/56 (76%)
 Frame = -3

Query: 169 PNRLSEKINFFADFGLSVMEHLLGLLKIRVHRGINLAVRDVRSSDPYVVIKIGKQK 2
           PNR S         G S+ME+LLGLL++RV RGINLAVRDVRSSDPY VIK+GKQK
Sbjct: 8   PNRTS---------GTSLMENLLGLLRVRVKRGINLAVRDVRSSDPYAVIKMGKQK 54


>ref|XP_002530486.1| ARF GTPase activator, putative [Ricinus communis]
           gi|223529983|gb|EEF31909.1| ARF GTPase activator,
           putative [Ricinus communis]
          Length = 183

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/40 (80%), Positives = 39/40 (97%)
 Frame = -3

Query: 121 SVMEHLLGLLKIRVHRGINLAVRDVRSSDPYVVIKIGKQK 2
           S+ME+LLGLL+IRV RG+NLAVRDVRSSDPY+V+K+GKQK
Sbjct: 17  SLMENLLGLLRIRVKRGVNLAVRDVRSSDPYIVVKMGKQK 56


>ref|XP_004137344.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Cucumis sativus]
           gi|449497488|ref|XP_004160416.1| PREDICTED: probable
           ADP-ribosylation factor GTPase-activating protein
           AGD11-like [Cucumis sativus]
          Length = 181

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = -3

Query: 124 LSVMEHLLGLLKIRVHRGINLAVRDVRSSDPYVVIKIGKQK 2
           L +ME+LLGLL+IR+ RG+NLAVRDVRSSDPYVV+K+GKQK
Sbjct: 15  LLLMENLLGLLRIRIVRGVNLAVRDVRSSDPYVVVKMGKQK 55


>emb|CAN69475.1| hypothetical protein VITISV_014376 [Vitis vinifera]
           gi|297734335|emb|CBI15582.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = -3

Query: 115 MEHLLGLLKIRVHRGINLAVRDVRSSDPYVVIKIGKQK 2
           ME+LLGLL++RV RGINLAVRDVRSSDPY VIK+GKQK
Sbjct: 1   MENLLGLLRVRVKRGINLAVRDVRSSDPYAVIKMGKQK 38


>ref|NP_001132168.1| uncharacterized protein LOC100193590 [Zea mays]
           gi|194693632|gb|ACF80900.1| unknown [Zea mays]
           gi|195640108|gb|ACG39522.1| GTPase activating protein
           [Zea mays] gi|414881376|tpg|DAA58507.1| TPA: putative
           calcium-dependent lipid-binding (CaLB domain) family
           protein [Zea mays]
          Length = 165

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/39 (74%), Positives = 38/39 (97%)
 Frame = -3

Query: 118 VMEHLLGLLKIRVHRGINLAVRDVRSSDPYVVIKIGKQK 2
           +++HL+GLLK+RV RG+NLAVRD+RSSDPYVV++IGKQK
Sbjct: 1   MLDHLVGLLKLRVVRGVNLAVRDLRSSDPYVVVRIGKQK 39