BLASTX nr result

ID: Coptis21_contig00002508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002508
         (1971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300588.1| actin related protein [Populus trichocarpa] ...   620   e-175
ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi...   619   e-175
ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cuc...   619   e-174
ref|XP_004166773.1| PREDICTED: LOW QUALITY PROTEIN: actin-relate...   616   e-174
ref|XP_003522829.1| PREDICTED: actin-related protein 8-like [Gly...   593   e-167

>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
            gi|222847846|gb|EEE85393.1| actin related protein
            [Populus trichocarpa]
          Length = 473

 Score =  620 bits (1599), Expect = e-175
 Identities = 314/482 (65%), Positives = 377/482 (78%)
 Frame = -2

Query: 1778 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSTERGFEGLGGTLDRIPADVFMQILKS 1599
            MAMLL+KV ESV++ +  F + +     V    S       LG   DR+P DV +QI++ 
Sbjct: 1    MAMLLKKVWESVSNRATSFSSSSID--SVTTPLSYTESSSSLGA-FDRLPIDVVLQIVRL 57

Query: 1598 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNHPEPQHWEALVFAEKHLRYGYPLFQTF 1419
            VGPK+AAR S+VCKSW+ L+SDNRLWI+FLQN H     W+++ F E HLR GYP+ QTF
Sbjct: 58   VGPKDAARLSVVCKSWRPLVSDNRLWIYFLQNYHDT---WDSVFFVETHLRSGYPI-QTF 113

Query: 1418 YNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1239
             +   +LSFM+IYGQR  + G+V++D             A PSGRSATFLEFGNIESPMY
Sbjct: 114  SSPITELSFMRIYGQRVQVPGAVIVDGGSGHCKYGWSKNACPSGRSATFLEFGNIESPMY 173

Query: 1238 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1059
            SRL+HFFATIYSRMQVK S +P VVS+P+CHYDDTESA+A+RRQLK+ IY+ LFDMNVPA
Sbjct: 174  SRLQHFFATIYSRMQVKASAHPIVVSLPLCHYDDTESARASRRQLKDAIYTALFDMNVPA 233

Query: 1058 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 879
            VCAINQATLAL+AA+R SGIVVNIGF VTSVVPIL GK+MR VGVEV+G GA+K+TG+LR
Sbjct: 234  VCAINQATLALYAAQRTSGIVVNIGFQVTSVVPILHGKIMRTVGVEVMGVGALKVTGFLR 293

Query: 878  ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQTG 699
            E MQ+NN+NF+SL+TV  LKENLCYVA DYEAE+ KDTQASFEV GEGWFTLSKERF+TG
Sbjct: 294  EQMQQNNLNFESLHTVHTLKENLCYVAADYEAELYKDTQASFEVPGEGWFTLSKERFKTG 353

Query: 698  EILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEK 519
            E+LF+P + GV  M L QAVALCM HC A+E+T DD WFKT+VL+GG+ACLPGL ERLEK
Sbjct: 354  EVLFQPCIAGVCAMGLQQAVALCMDHCHAAELTEDDAWFKTIVLSGGTACLPGLAERLEK 413

Query: 518  ELCTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRRFIT 339
            EL   L PS+S GIRVI P YGA+SAW GAK+I N+STF  SWC+T+ QFR+KS  RF  
Sbjct: 414  ELHGLLPPSISNGIRVISPSYGADSAWIGAKLIGNLSTFPGSWCVTKKQFRRKS--RFTL 471

Query: 338  SW 333
            +W
Sbjct: 472  AW 473


>ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera]
            gi|296090034|emb|CBI39853.3| unnamed protein product
            [Vitis vinifera]
          Length = 473

 Score =  619 bits (1597), Expect = e-175
 Identities = 313/481 (65%), Positives = 371/481 (77%)
 Frame = -2

Query: 1778 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSTERGFEGLGGTLDRIPADVFMQILKS 1599
            MA LLRKV ESV+ SS    T     R+V V  ST        G    IP DVFM IL+ 
Sbjct: 1    MAALLRKVWESVSRSSKA--TSESSDRRVVVQSST--------GAFSHIPFDVFMHILQF 50

Query: 1598 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNHPEPQHWEALVFAEKHLRYGYPLFQTF 1419
            + P+E A+ SLVCK W+FL+SDN+LW++ LQ    +P  W++LVFAE HL+ GYPL  TF
Sbjct: 51   LEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAETHLQMGYPLL-TF 109

Query: 1418 YNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1239
             +Q  QLSFM I+G+RA   G+++ID            Y   +G SATFLEFGNIE+P+Y
Sbjct: 110  NDQMPQLSFMHIFGRRAKAPGAIIIDGGSGYCKYGWSKYDTTTGMSATFLEFGNIETPIY 169

Query: 1238 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1059
            SRLRHF ATIYSRM VKPS  P V+S+PICHYDD ESAKA+RRQLKETI+SVLFDMNVPA
Sbjct: 170  SRLRHFLATIYSRMHVKPSAQPIVLSVPICHYDDNESAKASRRQLKETIHSVLFDMNVPA 229

Query: 1058 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 879
            VCAINQATLAL+AA++ SGIVVNIGFH TS+VPIL GKVMR+VGVEV+G G +KLTG+LR
Sbjct: 230  VCAINQATLALYAAKQTSGIVVNIGFHCTSIVPILHGKVMRKVGVEVVGMGGLKLTGFLR 289

Query: 878  ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQTG 699
            E MQ+ N+NF+SLYTVR+LKENLCYVA DYEAE+ KDT+ASF+V  EGWFTLS+ERFQTG
Sbjct: 290  ERMQQQNMNFESLYTVRSLKENLCYVAADYEAELSKDTRASFQVASEGWFTLSRERFQTG 349

Query: 698  EILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEK 519
            EILF+PRM GV  M LHQAVA CM HCQ++ +T D+ WFKTVVLAGGSACLPGL ERLEK
Sbjct: 350  EILFQPRMAGVTMMGLHQAVAHCMDHCQSAAITADESWFKTVVLAGGSACLPGLAERLEK 409

Query: 518  ELCTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRRFIT 339
            EL   + PS++ GIRV+PP YG +SAWFGAKIISN+STF  SWCMT+ QFR K RR  + 
Sbjct: 410  ELHGLVCPSVANGIRVLPPPYGEKSAWFGAKIISNLSTFPGSWCMTKKQFRPKVRRNLMV 469

Query: 338  S 336
            +
Sbjct: 470  T 470


>ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cucumis sativus]
          Length = 466

 Score =  619 bits (1595), Expect = e-174
 Identities = 317/481 (65%), Positives = 376/481 (78%), Gaps = 2/481 (0%)
 Frame = -2

Query: 1778 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSTERGFEGLG-GTLDRIPADVFMQILK 1602
            MAMLLRKV  SV++ S R   EN           +  GFE    G  DRIP ++ MQIL+
Sbjct: 1    MAMLLRKVWGSVSTRS-RLHLEN-----------SSTGFEESSLGDFDRIPVEILMQILQ 48

Query: 1601 SVGPKEAARASLVCKSWQFLIS-DNRLWIFFLQNNHPEPQHWEALVFAEKHLRYGYPLFQ 1425
              GPK  A+  ++CKSW+ L+S DN LWIFFLQN   + + W++++F E  L  GYPL +
Sbjct: 49   LAGPKTTAKMGMLCKSWRSLVSSDNTLWIFFLQN---QLEPWDSVLFGETKLASGYPL-E 104

Query: 1424 TFYNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESP 1245
            TF  Q + LSFM++Y +RA + GSV+ID            Y  PSGRSATFLEFGNIESP
Sbjct: 105  TFSGQMMPLSFMKVYNKRAEVPGSVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNIESP 164

Query: 1244 MYSRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNV 1065
            MYSRLRHFFATIYSRM+VK S YP VVS+PICHYDDTESAKA+R+QLKE IYSVLFDMNV
Sbjct: 165  MYSRLRHFFATIYSRMRVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNV 224

Query: 1064 PAVCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGY 885
            P+VCAINQATLAL+AAR+ SGIVVN+GF VTS+VPIL GKVMR+VGVEV+G GA+KLTGY
Sbjct: 225  PSVCAINQATLALYAARKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGY 284

Query: 884  LRELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQ 705
            LRELMQ+NNI+F+S+YTVR LKENLCYVA DYEAE+ KDTQAS+E  GEGWFTLSKERFQ
Sbjct: 285  LRELMQQNNIHFESMYTVRTLKENLCYVAEDYEAELTKDTQASYEAAGEGWFTLSKERFQ 344

Query: 704  TGEILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERL 525
            TGEILF+PRMGGV  M LH+AVALCM HC A+E++ DD WFKTVVL+GGSACLPGL ERL
Sbjct: 345  TGEILFQPRMGGVRAMGLHEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERL 404

Query: 524  EKELCTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRRF 345
            +KEL   L   +S GIRVIPP YG ++AWFGA++ISN+STF + WC+T+ QFRQKS+   
Sbjct: 405  QKELYGLLPSPLSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNL 464

Query: 344  I 342
            I
Sbjct: 465  I 465


>ref|XP_004166773.1| PREDICTED: LOW QUALITY PROTEIN: actin-related protein 8-like [Cucumis
            sativus]
          Length = 466

 Score =  616 bits (1588), Expect = e-174
 Identities = 316/481 (65%), Positives = 375/481 (77%), Gaps = 2/481 (0%)
 Frame = -2

Query: 1778 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSTERGFEGLG-GTLDRIPADVFMQILK 1602
            MAMLLRKV  SV++ S R   EN           +  GFE    G  DRIP ++ MQIL+
Sbjct: 1    MAMLLRKVWGSVSTRS-RLHLEN-----------SSTGFEESSLGDFDRIPVEILMQILQ 48

Query: 1601 SVGPKEAARASLVCKSWQFLIS-DNRLWIFFLQNNHPEPQHWEALVFAEKHLRYGYPLFQ 1425
              GPK  A+  ++CKSW+ L+S DN LWI FLQN   + + W++++F E  L  GYPL +
Sbjct: 49   LAGPKTTAKMGMLCKSWRSLVSSDNTLWIXFLQN---QLEPWDSVLFGETKLASGYPL-E 104

Query: 1424 TFYNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESP 1245
            TF  Q + LSFM++Y +RA + GSV+ID            Y  PSGRSATFLEFGNIESP
Sbjct: 105  TFSGQMMPLSFMKVYNKRAEVPGSVIIDGGSGYCKFGWSKYDGPSGRSATFLEFGNIESP 164

Query: 1244 MYSRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNV 1065
            MYSRLRHFFATIYSRM+VK S YP VVS+PICHYDDTESAKA+R+QLKE IYSVLFDMNV
Sbjct: 165  MYSRLRHFFATIYSRMRVKTSFYPVVVSLPICHYDDTESAKASRQQLKEAIYSVLFDMNV 224

Query: 1064 PAVCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGY 885
            P+VCAINQATLAL+AAR+ SGIVVN+GF VTS+VPIL GKVMR+VGVEV+G GA+KLTGY
Sbjct: 225  PSVCAINQATLALYAARKTSGIVVNVGFQVTSIVPILHGKVMRKVGVEVVGLGALKLTGY 284

Query: 884  LRELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQ 705
            LRELMQ+NNI+F+S+YTVR LKENLCYVA DYEAE+ KDTQAS+E  GEGWFTLSKERFQ
Sbjct: 285  LRELMQQNNIHFESMYTVRTLKENLCYVAEDYEAELTKDTQASYEAAGEGWFTLSKERFQ 344

Query: 704  TGEILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERL 525
            TGEILF+PRMGGV  M LH+AVALCM HC A+E++ DD WFKTVVL+GGSACLPGL ERL
Sbjct: 345  TGEILFQPRMGGVRAMGLHEAVALCMDHCHAAELSYDDSWFKTVVLSGGSACLPGLAERL 404

Query: 524  EKELCTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRRF 345
            +KEL   L   +S GIRVIPP YG ++AWFGA++ISN+STF + WC+T+ QFRQKS+   
Sbjct: 405  QKELYGLLPSPLSNGIRVIPPPYGTDTAWFGARLISNLSTFPNHWCITKKQFRQKSKLNL 464

Query: 344  I 342
            I
Sbjct: 465  I 465


>ref|XP_003522829.1| PREDICTED: actin-related protein 8-like [Glycine max]
          Length = 477

 Score =  593 bits (1530), Expect = e-167
 Identities = 300/479 (62%), Positives = 362/479 (75%)
 Frame = -2

Query: 1778 MAMLLRKVLESVTSSSPRFKTENRQRRQVFVVDSTERGFEGLGGTLDRIPADVFMQILKS 1599
            M+MLLRKV E V   S    + +            E     +G  L+ +P+D+ M IL+ 
Sbjct: 1    MSMLLRKVWERVLWRSDSSTSASASASSSSSSSPPEVACSDMG-ELELLPSDILMHILRL 59

Query: 1598 VGPKEAARASLVCKSWQFLISDNRLWIFFLQNNHPEPQHWEALVFAEKHLRYGYPLFQTF 1419
            +GPKEAA+ S+VCK+ + L+SDNRLWI FLQ +  EP   +++ FAE  L YGYPL   F
Sbjct: 60   LGPKEAAKLSVVCKALRSLVSDNRLWIHFLQTHQAEPSG-DSVFFAETTLSYGYPL-PPF 117

Query: 1418 YNQSIQLSFMQIYGQRAHLTGSVLIDXXXXXXXXXXXXYAAPSGRSATFLEFGNIESPMY 1239
                 QLSF  IYGQRA + GS++ID            YA PSGRSATFLEFGNIESPMY
Sbjct: 118  AGHWPQLSFKHIYGQRALVPGSIIIDGGSGYCKFGWSKYAYPSGRSATFLEFGNIESPMY 177

Query: 1238 SRLRHFFATIYSRMQVKPSKYPTVVSIPICHYDDTESAKAARRQLKETIYSVLFDMNVPA 1059
            +RLRHFFATIY+RMQVKP+K P +VS+PICHYDDTESAKA+R+QLKE IY+ LFDMNVPA
Sbjct: 178  TRLRHFFATIYNRMQVKPNKQPVIVSVPICHYDDTESAKASRQQLKEAIYASLFDMNVPA 237

Query: 1058 VCAINQATLALFAARRISGIVVNIGFHVTSVVPILRGKVMREVGVEVLGQGAVKLTGYLR 879
            VCAINQATLAL+AA+R SGIVVNIGF VTS+VPIL GKVMR+VGVEV+G GA+KLTG+LR
Sbjct: 238  VCAINQATLALYAAKRTSGIVVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLR 297

Query: 878  ELMQKNNINFDSLYTVRALKENLCYVAIDYEAEMQKDTQASFEVRGEGWFTLSKERFQTG 699
            E MQ NN++F SLYTVR LKENLCYVA+DYEAE+ KDT+ASFE  GEGWFTLSK RFQT 
Sbjct: 298  EKMQLNNLSFQSLYTVRTLKENLCYVALDYEAELLKDTKASFEAAGEGWFTLSKGRFQTA 357

Query: 698  EILFRPRMGGVHTMALHQAVALCMHHCQASEVTCDDGWFKTVVLAGGSACLPGLTERLEK 519
            EILF+P + GV  M LHQA+ALC+ HC ++++ CD  W+KT+VL+GG+ACLPGL ER+EK
Sbjct: 358  EILFQPHLAGVQAMGLHQAIALCVEHCHSADLACDSDWYKTIVLSGGTACLPGLAERIEK 417

Query: 518  ELCTFLTPSMSEGIRVIPPQYGAESAWFGAKIISNMSTFRDSWCMTENQFRQKSRRRFI 342
            EL   L P +S GIRVIPP YGA++ WFGAKI+ N+STF   WC+T+ QFRQK R   I
Sbjct: 418  ELHALLPPYVSNGIRVIPPPYGADTPWFGAKIVGNLSTFPGHWCVTKKQFRQKPRLNLI 476


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