BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002503
         (2782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   390   e-105
emb|CBI21855.3| unnamed protein product [Vitis vinifera]              334   8e-94
ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating en...   332   4e-93
ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   347   1e-92
ref|XP_003567920.1| PREDICTED: probable ubiquitin-conjugating en...   323   5e-90

>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21170-like
            [Vitis vinifera]
          Length = 569

 Score =  390 bits (1001), Expect = e-105
 Identities = 194/392 (49%), Positives = 268/392 (68%)
 Frame = -2

Query: 2781 CNALLDALQKNNEIRYAWCFCASVFRHGVEMDSFTWCLVARVLCKLGKVENAVKLLKSGV 2602
            CNALLD+LQ+ NEI+ AWC C ++ R+GV  D   +  +A +LCK GK+E  V+LL   +
Sbjct: 182  CNALLDSLQRENEIKLAWCVCGALIRNGVLPD---YVRIALILCKNGKLERVVRLLDMSI 238

Query: 2601 VSTAAGMYDLLIDCYCKMGRFRDAIDCLNEMHIKNFTPGFRIYSAVLDGACXXXXXXXXX 2422
            V  A  +Y L+IDCYC+ G F  A   LNEM  + F PGF  Y+++LDGAC         
Sbjct: 239  VCNAL-IYKLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGACKYENDEVIQ 297

Query: 2421 XXXXXXXXXRKLIPAIPLSDYNPIIQKLCDFGRVYAAEMLFENALDEKSELQDGSYGCMM 2242
                       L+P + LS+Y+ IIQK+C+ G+ +AA+M F+ A +EK EL + +YGCM+
Sbjct: 298  IVMGSMVEKG-LLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKIELDNATYGCML 356

Query: 2241 GILCKEGRVKKAMQVYKMIREKGVNVSHNNYSAFADAICQEEPSEVVDELLKDVIARGFI 2062
              L K+GRVK+A+ VY +I E GV V    Y AF + +C+E+PS+ V +L+ ++I +GF 
Sbjct: 357  RALAKDGRVKEAIGVYLVILESGVTVKDGCYHAFVNVLCEEDPSQEVSKLMGEIIGKGFS 416

Query: 2061 PHGLELSKLVADNCKRGRWKEVEDLLNVILDKGISLDLFSCSSLVEHYCSIGEIDLAVVL 1882
            P G +LSK +   CK GRW E +DLLNV ++KG+  D F CS+LVEHYC   +ID ++ L
Sbjct: 417  PCGSKLSKFITSLCKNGRWTEADDLLNVTIEKGLLPDSFCCSALVEHYCRSRQIDSSIAL 476

Query: 1881 NDKIQKIGGTLDVTTYNVLLIGLLKQRKKGGAVQVFDYMRRRNVVSSISFSIMILGLCRE 1702
            ++KI+K+ G+LDV TYNVLL GL  +++   AV VFD MR +N++SS SF+IM+ GLCRE
Sbjct: 477  HEKIKKVKGSLDVATYNVLLNGLFMEKRIEDAVSVFDCMRSQNLLSSTSFTIMVSGLCRE 536

Query: 1701 REMRKAMEIHDDMLKMGLKPDEATYKHLIAKF 1606
            RE+RKAM+ HD+MLKMGLKPD ATYK LI+ F
Sbjct: 537  RELRKAMKFHDEMLKMGLKPDRATYKRLISGF 568


>emb|CBI21855.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  334 bits (857), Expect(2) = 8e-94
 Identities = 164/261 (62%), Positives = 194/261 (74%)
 Frame = -2

Query: 1002 LSLQAQFDAADLPPGVEASVPWLDEHEEKQKLGANLPSEASLAARSSPLTVNGVTEEEED 823
            L LQAQFD  D+PPGVEASVPWL +    +K+ A           +SP T N V  +   
Sbjct: 144  LKLQAQFDNVDIPPGVEASVPWLKDPTPSEKMPA--------VVDTSP-TPNDVLGK--- 191

Query: 822  KMFREFKSFDTVQDFTDHHFCKQASPAKRPGKDWAKAIQNDWRILEKDLPETIFVRVYEE 643
              +  FK FDTV+DF+DHHF +     ++P K+WAK IQ +W+ILE+DLPETIFVRVYE 
Sbjct: 192  --YLFFKQFDTVEDFSDHHFSRMGFVGEQPPKNWAKKIQEEWKILERDLPETIFVRVYEA 249

Query: 642  RMDLLRAVIIGAAGTPYHDGLFFFDVFFPSEYPKVAPKVYYYSGGLRLNPNLYGCGKVCL 463
            RMDLLRAVI+G AGTPYHDGLF FDV FP  YP V P VYYYSGGLRLNPNLY CGKVCL
Sbjct: 250  RMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSVPPMVYYYSGGLRLNPNLYDCGKVCL 309

Query: 462  SLLGTWSGQGTENWSPGNSTILQVLLSIQALVLNAKPYFNEPGYERMAGQTTGEQKAKDY 283
            SLL TW+G+ TE W PG ST+LQVL+SIQ L+LNAKP+FNEPGYE M     GE+++K Y
Sbjct: 310  SLLNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNAKPFFNEPGYENMYVGEDGERRSKQY 369

Query: 282  NENTFVLSCKTMLYTLRRPPK 220
            NE+ F+LS KTM+YT+RRPPK
Sbjct: 370  NEDVFILSLKTMVYTIRRPPK 390



 Score = 38.9 bits (89), Expect(2) = 8e-94
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -3

Query: 152 HFEYFVGGHFRLRAQTILEACKEYIKGT 69
           HFE FV GHFR RA  IL ACK Y +G+
Sbjct: 391 HFEDFVVGHFRQRAHDILVACKAYKEGS 418


>ref|XP_002274123.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 26-like [Vitis
            vinifera]
          Length = 511

 Score =  332 bits (851), Expect(2) = 4e-93
 Identities = 165/286 (57%), Positives = 198/286 (69%), Gaps = 25/286 (8%)
 Frame = -2

Query: 1002 LSLQAQFDAADLPPGVEASVPWLDEHEEKQKLGANLPS---------------------- 889
            L LQAQFD  D+PPGVEASVPWL +    +K+ A + +                      
Sbjct: 144  LKLQAQFDNVDIPPGVEASVPWLKDPTPSEKMPAVVDTSPTPSLQGQCARVGSFSDPGEK 203

Query: 888  EASLAARSSPLTVNGVTEEEEDKMFRE---FKSFDTVQDFTDHHFCKQASPAKRPGKDWA 718
            E   AA SS        +  +D +  +   FK FDTV+DF+DHHF +     ++P K+WA
Sbjct: 204  ETKTAATSSSTVPAQSGDGNQDDVLGKYLFFKQFDTVEDFSDHHFSRMGFVGEQPPKNWA 263

Query: 717  KAIQNDWRILEKDLPETIFVRVYEERMDLLRAVIIGAAGTPYHDGLFFFDVFFPSEYPKV 538
            K IQ +W+ILE+DLPETIFVRVYE RMDLLRAVI+G AGTPYHDGLF FDV FP  YP V
Sbjct: 264  KKIQEEWKILERDLPETIFVRVYEARMDLLRAVIVGPAGTPYHDGLFVFDVLFPPNYPSV 323

Query: 537  APKVYYYSGGLRLNPNLYGCGKVCLSLLGTWSGQGTENWSPGNSTILQVLLSIQALVLNA 358
             P VYYYSGGLRLNPNLY CGKVCLSLL TW+G+ TE W PG ST+LQVL+SIQ L+LNA
Sbjct: 324  PPMVYYYSGGLRLNPNLYDCGKVCLSLLNTWNGKKTEMWIPGKSTMLQVLVSIQGLILNA 383

Query: 357  KPYFNEPGYERMAGQTTGEQKAKDYNENTFVLSCKTMLYTLRRPPK 220
            KP+FNEPGYE M     GE+++K YNE+ F+LS KTM+YT+RRPPK
Sbjct: 384  KPFFNEPGYENMYVGEDGERRSKQYNEDVFILSLKTMVYTIRRPPK 429



 Score = 38.9 bits (89), Expect(2) = 4e-93
 Identities = 18/28 (64%), Positives = 20/28 (71%)
 Frame = -3

Query: 152 HFEYFVGGHFRLRAQTILEACKEYIKGT 69
           HFE FV GHFR RA  IL ACK Y +G+
Sbjct: 430 HFEDFVVGHFRQRAHDILVACKAYKEGS 457


>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  347 bits (890), Expect = 1e-92
 Identities = 181/392 (46%), Positives = 250/392 (63%)
 Frame = -2

Query: 2781 CNALLDALQKNNEIRYAWCFCASVFRHGVEMDSFTWCLVARVLCKLGKVENAVKLLKSGV 2602
            CN++LD LQ+ NEI+ AWCF  ++ + GV  D  TW L+A++LCK G  E  VK L  GV
Sbjct: 174  CNSVLDVLQRENEIKLAWCFYCAMIKDGVLPDKLTWSLIAQILCKDGNFERIVKFLDMGV 233

Query: 2601 VSTAAGMYDLLIDCYCKMGRFRDAIDCLNEMHIKNFTPGFRIYSAVLDGACXXXXXXXXX 2422
             ++   +Y+ +IDC  K G F  A + LN+M  +   PGF  YSA+LDGAC         
Sbjct: 234  YNSV--LYNGVIDCCSKRGDFEAAFERLNQMCERKLDPGFSTYSAILDGACKHGNEEVIE 291

Query: 2421 XXXXXXXXXRKLIPAIPLSDYNPIIQKLCDFGRVYAAEMLFENALDEKSELQDGSYGCMM 2242
                       L+P  PLS  + +IQK  D  ++  A M F  A DEK  LQD +YGCM+
Sbjct: 292  RVMDIMAEKG-LLPKCPLSQCDSVIQKFSDLCKMNVATMFFRRACDEKIGLQDATYGCML 350

Query: 2241 GILCKEGRVKKAMQVYKMIREKGVNVSHNNYSAFADAICQEEPSEVVDELLKDVIARGFI 2062
              L KE RVK+A+ +Y +I EKG+ V  + Y AF D + +E+  E   E+L D++ RGF 
Sbjct: 351  KALSKEARVKEAIGLYSLISEKGIRVKDSTYHAFLDLLSEEDQYEEGYEILGDMMRRGFR 410

Query: 2061 PHGLELSKLVADNCKRGRWKEVEDLLNVILDKGISLDLFSCSSLVEHYCSIGEIDLAVVL 1882
            P  + LSK +    ++ RW+EVEDLL+++L+KG+  D   C SLVEHYCS  +ID AV L
Sbjct: 411  PGTVGLSKFILLLSRKRRWREVEDLLDLVLEKGLLPDSLCCCSLVEHYCSRRQIDKAVAL 470

Query: 1881 NDKIQKIGGTLDVTTYNVLLIGLLKQRKKGGAVQVFDYMRRRNVVSSISFSIMILGLCRE 1702
            ++K++K+  +LDV TYN+LL GL+K  +    V+VFDYM+   +V+S SF+I I GLCR 
Sbjct: 471  HNKMEKLQASLDVATYNILLDGLVKNGRIEEVVRVFDYMKGLKLVNSESFTITIRGLCRA 530

Query: 1701 REMRKAMEIHDDMLKMGLKPDEATYKHLIAKF 1606
            +EMRKAM++HD+ML MGLKPD+A YK LI +F
Sbjct: 531  KEMRKAMKLHDEMLDMGLKPDKAAYKRLILEF 562


>ref|XP_003567920.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like
           [Brachypodium distachyon]
          Length = 509

 Score =  323 bits (829), Expect(2) = 5e-90
 Identities = 152/264 (57%), Positives = 195/264 (73%), Gaps = 4/264 (1%)
 Frame = -2

Query: 999 SLQAQFDAADLPPGVEASVPWLDEHEEKQKLGANLPSEASLAARSSPLTVNGVTEEEEDK 820
           +L A+FD  D+PPGVEA +PWL +            + A ++ ++ P+ +    +++ D+
Sbjct: 162 NLSAKFDDLDIPPGVEAPLPWLQK------------TAAEMSNKTKPIMI---VDDKVDE 206

Query: 819 MFREFKSFDTVQDFTDHHFCK----QASPAKRPGKDWAKAIQNDWRILEKDLPETIFVRV 652
            +  FK FDTV   +DH++ K    +    K+P KDWAK IQ++W++LEKDLP+TIFVR 
Sbjct: 207 KYNAFKQFDTVDCHSDHYYSKPELRRVQVVKKPSKDWAKRIQHEWKVLEKDLPDTIFVRA 266

Query: 651 YEERMDLLRAVIIGAAGTPYHDGLFFFDVFFPSEYPKVAPKVYYYSGGLRLNPNLYGCGK 472
           YE+RMDLLRAVI+G AGTPYHDGLFFFD++FP +YP   P V Y SGGLRLNPNLY CGK
Sbjct: 267 YEDRMDLLRAVIMGPAGTPYHDGLFFFDIYFPPQYPNTPPLVSYRSGGLRLNPNLYACGK 326

Query: 471 VCLSLLGTWSGQGTENWSPGNSTILQVLLSIQALVLNAKPYFNEPGYERMAGQTTGEQKA 292
           VCLSLL TWSG G E W+P NST+LQVL+SIQALVLNAKPYFNEPGY   A   +GE+++
Sbjct: 327 VCLSLLNTWSGSGCEKWNPSNSTMLQVLVSIQALVLNAKPYFNEPGYANSANTPSGEKRS 386

Query: 291 KDYNENTFVLSCKTMLYTLRRPPK 220
             YNE+TF+LSC+TMLY+LR PPK
Sbjct: 387 LTYNEDTFLLSCRTMLYSLRNPPK 410



 Score = 37.0 bits (84), Expect(2) = 5e-90
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = -3

Query: 152 HFEYFVGGHFRLRAQTILEACKEYIKG 72
           HFE FV GHFR     +L ACK Y+ G
Sbjct: 411 HFENFVAGHFRKYGHNVLVACKAYLDG 437