BLASTX nr result

ID: Coptis21_contig00002456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002456
         (2181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis v...    89   3e-17
emb|CAN80138.1| hypothetical protein VITISV_028512 [Vitis vinifera]    87   7e-17
ref|NP_175690.1| 2-oxoglutarate-dependent dioxygenase-related pr...    89   2e-16
dbj|BAC42855.1| putative oxidoreductase [Arabidopsis thaliana]         89   2e-16
ref|XP_002298129.1| 2-oxoglutarate-dependent dioxygenase [Populu...    85   3e-15

>ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis vinifera]
           gi|297743335|emb|CBI36202.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score = 88.6 bits (218), Expect(2) = 3e-17
 Identities = 43/78 (55%), Positives = 60/78 (76%)
 Frame = -1

Query: 324 IIDFTNIDLKPGTSGWVSVKAQVMQALEECGCFEAVYPKVPVELHMALFSSVVELFDLPV 145
           +IDF++ +LKPGT  W  VKAQV +ALEE GCFEA + KVP++L  A+F ++ ELFDLP+
Sbjct: 11  VIDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFGALEELFDLPL 70

Query: 144 ETKSQNIKSSKRNFLGYI 91
           +TK +N  SSK+ + GY+
Sbjct: 71  QTKLRN--SSKKPYHGYV 86



 Score = 28.1 bits (61), Expect(2) = 3e-17
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 47  EKMERFTNMMWPQGN 3
           EK E FT ++WP+GN
Sbjct: 107 EKAEHFTKLLWPEGN 121


>emb|CAN80138.1| hypothetical protein VITISV_028512 [Vitis vinifera]
          Length = 314

 Score = 87.4 bits (215), Expect(2) = 7e-17
 Identities = 43/77 (55%), Positives = 59/77 (76%)
 Frame = -1

Query: 321 IDFTNIDLKPGTSGWVSVKAQVMQALEECGCFEAVYPKVPVELHMALFSSVVELFDLPVE 142
           IDF++ +LKPGT  W  VKAQV +ALEE GCFEA + KVP++L  A+F ++ ELFDLP++
Sbjct: 12  IDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFGALEELFDLPLQ 71

Query: 141 TKSQNIKSSKRNFLGYI 91
           TK +N  SSK+ + GY+
Sbjct: 72  TKLRN--SSKKPYHGYV 86



 Score = 28.1 bits (61), Expect(2) = 7e-17
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 47  EKMERFTNMMWPQGN 3
           EK E FT ++WP+GN
Sbjct: 107 EKAEHFTKLLWPEGN 121


>ref|NP_175690.1| 2-oxoglutarate-dependent dioxygenase-related protein [Arabidopsis
           thaliana] gi|12324657|gb|AAG52293.1|AC019018_30 putative
           oxidoreductase; 36199-37309 [Arabidopsis thaliana]
           gi|332194733|gb|AEE32854.1| 2-oxoglutarate-dependent
           dioxygenase-related protein [Arabidopsis thaliana]
          Length = 289

 Score = 88.6 bits (218), Expect(2) = 2e-16
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = -1

Query: 357 SLQFIYKKRFLIIDFTNIDLKPGTSGWVSVKAQVMQALEECGCFEAVYPKVPVELHMALF 178
           SL+     +  +IDFT+ DLKPGT  W SV+A V +ALEE GCFEA++ KVP+EL  A+F
Sbjct: 3   SLETTLALQLPVIDFTSRDLKPGTIQWDSVRADVRRALEEYGCFEALFDKVPLELRKAVF 62

Query: 177 SSVVELFDLPVETKSQNIKSSKRNFLGYI 91
            +  E+F LP+ETK + +  SKR + GY+
Sbjct: 63  DASEEVFQLPLETKKRVV--SKRKYRGYV 89



 Score = 25.8 bits (55), Expect(2) = 2e-16
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 47  EKMERFTNMMWPQGN 3
           +K+  FT+ +WPQGN
Sbjct: 110 DKVNAFTHKLWPQGN 124


>dbj|BAC42855.1| putative oxidoreductase [Arabidopsis thaliana]
          Length = 179

 Score = 88.6 bits (218), Expect(2) = 2e-16
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = -1

Query: 357 SLQFIYKKRFLIIDFTNIDLKPGTSGWVSVKAQVMQALEECGCFEAVYPKVPVELHMALF 178
           SL+     +  +IDFT+ DLKPGT  W SV+A V +ALEE GCFEA++ KVP+EL  A+F
Sbjct: 3   SLETTLALQLPVIDFTSRDLKPGTIQWDSVRADVRRALEEYGCFEALFDKVPLELRKAVF 62

Query: 177 SSVVELFDLPVETKSQNIKSSKRNFLGYI 91
            +  E+F LP+ETK + +  SKR + GY+
Sbjct: 63  DASEEVFQLPLETKKRVV--SKRKYRGYV 89



 Score = 25.8 bits (55), Expect(2) = 2e-16
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 47  EKMERFTNMMWPQGN 3
           +K+  FT+ +WPQGN
Sbjct: 110 DKVNAFTHKLWPQGN 124


>ref|XP_002298129.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222845387|gb|EEE82934.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 314

 Score = 84.7 bits (208), Expect(2) = 3e-15
 Identities = 42/87 (48%), Positives = 59/87 (67%)
 Frame = -1

Query: 324 IIDFTNIDLKPGTSGWVSVKAQVMQALEECGCFEAVYPKVPVELHMALFSSVVELFDLPV 145
           IIDF+N+   PG + W  VK QV +ALEE GCFEA++ K+P E   A+F +V ELFDLP+
Sbjct: 11  IIDFSNLGQNPGAAEWDLVKLQVRKALEEYGCFEALFDKIPAESRKAIFGAVEELFDLPL 70

Query: 144 ETKSQNIKSSKRNFLGYIALTMRACLF 64
           +TK +N  +SK+ + GY+    +  LF
Sbjct: 71  QTKMRN--ASKKPYHGYVGQYPQVPLF 95



 Score = 25.4 bits (54), Expect(2) = 3e-15
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 47  EKMERFTNMMWPQGN 3
           E++E  T ++WPQGN
Sbjct: 107 EEVESMTTILWPQGN 121


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